Literature DB >> 21522641

2-((Z)-{3-[(Z)-(2-Hy-droxy-5-methyl-benzyl-idene)amino]-2,2-dimethyl-prop-yl}imino-meth-yl)-4-methyl-phenol.

Reza Kia, Hadi Kargar, Valiollah Mirkhani, Fatemeh Ganji, Muhammad Nawaz Tahir.   

Abstract

In the title compound, C(21)H(26)N(2)O(2), the dihedral angle between the two benzene rings is 73.47 (16)°. Strong intra-molecular O-H⋯N hydrogen bonds generate S(6) ring motifs. The substituted benzene rings are twisted around the central quaternary C atom in opposite directions, making a vault geometry.

Entities:  

Year:  2010        PMID: 21522641      PMCID: PMC3050403          DOI: 10.1107/S1600536810051688

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For standard bond lengths, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Kargar et al. (2009 ▶, 2010 ▶).

Experimental

Crystal data

C21H26N2O2 M = 338.44 Orthorhombic, a = 5.8950 (3) Å b = 17.8634 (10) Å c = 18.2140 (11) Å V = 1918.02 (19) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.30 × 0.18 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.978, T max = 0.991 16208 measured reflections 2199 independent reflections 1368 reflections with I > 2σ(I) R int = 0.062

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.112 S = 1.03 2199 reflections 231 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.12 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810051688/gw2096sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051688/gw2096Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H26N2O2F(000) = 728
Mr = 338.44Dx = 1.172 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 2150 reflections
a = 5.8950 (3) Åθ = 2.5–29.8°
b = 17.8634 (10) ŵ = 0.08 mm1
c = 18.2140 (11) ÅT = 296 K
V = 1918.02 (19) Å3Plate, yellow
Z = 40.30 × 0.18 × 0.12 mm
Bruker SMART APEXII CCD area-detector diffractometer2199 independent reflections
Radiation source: fine-focus sealed tube1368 reflections with I > 2σ(I)
graphiteRint = 0.062
φ and ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −7→7
Tmin = 0.978, Tmax = 0.991k = −22→22
16208 measured reflectionsl = −22→22
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.112w = 1/[σ2(Fo2) + (0.0485P)2 + 0.082P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2199 reflectionsΔρmax = 0.15 e Å3
231 parametersΔρmin = −0.12 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.013 (2)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.4633 (4)0.71477 (13)0.18637 (14)0.0691 (7)
H1A0.38870.67860.19990.104*
O2−0.1798 (4)0.44857 (14)0.02145 (14)0.0769 (7)
H2A−0.09360.46430.05330.115*
N10.1130 (4)0.62471 (14)0.19160 (15)0.0576 (7)
N20.1758 (5)0.44863 (14)0.10671 (15)0.0589 (7)
C10.3362 (5)0.75772 (18)0.14103 (17)0.0513 (8)
C20.4215 (5)0.82499 (18)0.11644 (19)0.0593 (9)
H20.56500.84010.13160.071*
C30.2994 (6)0.87012 (19)0.07010 (18)0.0593 (9)
H30.36140.91530.05450.071*
C40.0828 (5)0.84926 (18)0.04596 (18)0.0558 (9)
C5−0.0004 (6)0.78143 (17)0.07017 (17)0.0544 (8)
H5−0.14210.76590.05370.065*
C60.1183 (5)0.73540 (17)0.11802 (17)0.0487 (8)
C7−0.0504 (7)0.90009 (19)−0.0039 (2)0.0777 (11)
H7A0.00480.8952−0.05330.117*
H7B−0.03320.95100.01200.117*
H7C−0.20790.8865−0.00230.117*
C80.0162 (6)0.66623 (17)0.14440 (18)0.0562 (9)
H8−0.12460.65200.12610.067*
C9−0.0035 (6)0.55714 (17)0.21706 (19)0.0641 (10)
H9A−0.10670.54010.17910.077*
H9B−0.09290.56930.26010.077*
C100.1605 (6)0.49409 (17)0.23599 (18)0.0615 (9)
C110.3201 (7)0.5184 (2)0.2980 (2)0.0892 (13)
H11A0.23360.52760.34170.134*
H11B0.39820.56330.28380.134*
H11C0.42860.47940.30720.134*
C120.0218 (8)0.4259 (2)0.2593 (2)0.0891 (13)
H12A0.12160.38420.26730.134*
H12B−0.08500.41360.22140.134*
H12C−0.05820.43700.30390.134*
C130.3085 (6)0.47518 (18)0.16952 (19)0.0640 (10)
H13A0.39290.51940.15510.077*
H13B0.41710.43690.18330.077*
C140.2562 (6)0.39671 (18)0.06619 (18)0.0571 (9)
H140.39620.37620.07840.069*
C150.1397 (5)0.36831 (16)0.00220 (18)0.0512 (8)
C160.2388 (6)0.31298 (17)−0.04090 (17)0.0542 (8)
H160.37900.2940−0.02670.065*
C170.1400 (6)0.28490 (17)−0.10341 (18)0.0570 (9)
C18−0.0714 (6)0.3128 (2)−0.1220 (2)0.0638 (10)
H18−0.14380.2943−0.16360.077*
C19−0.1782 (6)0.3673 (2)−0.08042 (19)0.0648 (9)
H19−0.32050.3850−0.09410.078*
C20−0.0727 (5)0.39531 (18)−0.01880 (19)0.0542 (9)
C210.2588 (7)0.22644 (19)−0.14975 (19)0.0775 (12)
H21A0.37790.2497−0.17750.116*
H21B0.15170.2039−0.18270.116*
H21C0.32220.1886−0.11840.116*
U11U22U33U12U13U23
O10.0584 (15)0.0711 (17)0.0778 (17)0.0012 (12)−0.0145 (14)0.0031 (14)
O20.0690 (16)0.0818 (17)0.0798 (19)0.0272 (15)0.0009 (14)−0.0003 (14)
N10.0590 (17)0.0501 (16)0.0636 (18)0.0000 (13)0.0014 (15)−0.0032 (14)
N20.0615 (17)0.0523 (17)0.0629 (18)0.0032 (14)−0.0008 (16)0.0023 (15)
C10.0439 (18)0.0545 (19)0.056 (2)0.0055 (16)−0.0042 (16)−0.0062 (16)
C20.0503 (19)0.060 (2)0.068 (2)−0.0066 (17)−0.0024 (18)−0.0138 (18)
C30.057 (2)0.056 (2)0.065 (2)−0.0064 (17)0.0018 (18)−0.0047 (18)
C40.056 (2)0.054 (2)0.058 (2)0.0018 (16)0.0007 (17)−0.0054 (16)
C50.0467 (18)0.055 (2)0.061 (2)−0.0020 (16)−0.0037 (17)−0.0096 (17)
C60.0423 (17)0.0497 (18)0.0540 (19)−0.0008 (14)0.0011 (16)−0.0062 (16)
C70.078 (3)0.070 (2)0.085 (3)−0.0059 (19)−0.015 (2)0.014 (2)
C80.0485 (19)0.057 (2)0.063 (2)−0.0020 (16)0.0052 (17)−0.0098 (17)
C90.067 (2)0.061 (2)0.064 (2)−0.0107 (19)0.0100 (19)−0.0015 (17)
C100.072 (2)0.052 (2)0.060 (2)−0.0139 (19)−0.0039 (19)0.0081 (17)
C110.109 (3)0.080 (3)0.079 (3)−0.012 (2)−0.027 (3)−0.002 (2)
C120.116 (3)0.077 (3)0.074 (3)−0.032 (3)−0.009 (3)0.016 (2)
C130.060 (2)0.052 (2)0.080 (3)−0.0010 (17)−0.006 (2)−0.0061 (18)
C140.0495 (19)0.054 (2)0.068 (2)0.0020 (16)−0.0012 (18)0.0062 (18)
C150.0506 (19)0.0491 (18)0.0538 (19)0.0021 (15)0.0049 (17)0.0105 (16)
C160.0496 (19)0.0534 (19)0.059 (2)0.0028 (15)0.0031 (17)0.0083 (17)
C170.063 (2)0.055 (2)0.053 (2)−0.0015 (17)0.0069 (18)0.0096 (17)
C180.064 (2)0.072 (2)0.055 (2)−0.0100 (19)−0.0029 (19)0.0109 (18)
C190.0495 (19)0.079 (3)0.066 (2)0.0022 (19)−0.002 (2)0.018 (2)
C200.051 (2)0.0555 (19)0.057 (2)0.0067 (16)0.0082 (17)0.0106 (17)
C210.099 (3)0.068 (2)0.065 (2)0.011 (2)0.006 (2)−0.0031 (19)
O1—C11.354 (3)C10—C121.527 (5)
O1—H1A0.8200C10—C131.530 (4)
O2—C201.357 (4)C10—C111.533 (5)
O2—H2A0.8200C11—H11A0.9600
N1—C81.271 (4)C11—H11B0.9600
N1—C91.464 (4)C11—H11C0.9600
N2—C141.276 (4)C12—H12A0.9600
N2—C131.465 (4)C12—H12B0.9600
C1—C21.377 (4)C12—H12C0.9600
C1—C61.409 (4)C13—H13A0.9700
C2—C31.371 (4)C13—H13B0.9700
C2—H20.9300C14—C151.445 (4)
C3—C41.401 (4)C14—H140.9300
C3—H30.9300C15—C161.391 (4)
C4—C51.380 (4)C15—C201.395 (4)
C4—C71.506 (4)C16—C171.374 (4)
C5—C61.388 (4)C16—H160.9300
C5—H50.9300C17—C181.384 (5)
C6—C81.456 (4)C17—C211.515 (4)
C7—H7A0.9600C18—C191.386 (5)
C7—H7B0.9600C18—H180.9300
C7—H7C0.9600C19—C201.377 (4)
C8—H80.9300C19—H190.9300
C9—C101.524 (5)C21—H21A0.9600
C9—H9A0.9700C21—H21B0.9600
C9—H9B0.9700C21—H21C0.9600
C1—O1—H1A109.5C10—C11—H11B109.5
C20—O2—H2A109.5H11A—C11—H11B109.5
C8—N1—C9119.0 (3)C10—C11—H11C109.5
C14—N2—C13119.3 (3)H11A—C11—H11C109.5
O1—C1—C2119.4 (3)H11B—C11—H11C109.5
O1—C1—C6121.7 (3)C10—C12—H12A109.5
C2—C1—C6118.9 (3)C10—C12—H12B109.5
C3—C2—C1121.4 (3)H12A—C12—H12B109.5
C3—C2—H2119.3C10—C12—H12C109.5
C1—C2—H2119.3H12A—C12—H12C109.5
C2—C3—C4121.0 (3)H12B—C12—H12C109.5
C2—C3—H3119.5N2—C13—C10112.6 (3)
C4—C3—H3119.5N2—C13—H13A109.1
C5—C4—C3117.2 (3)C10—C13—H13A109.1
C5—C4—C7122.5 (3)N2—C13—H13B109.1
C3—C4—C7120.3 (3)C10—C13—H13B109.1
C4—C5—C6122.8 (3)H13A—C13—H13B107.8
C4—C5—H5118.6N2—C14—C15123.0 (3)
C6—C5—H5118.6N2—C14—H14118.5
C5—C6—C1118.6 (3)C15—C14—H14118.5
C5—C6—C8120.1 (3)C16—C15—C20117.9 (3)
C1—C6—C8121.3 (3)C16—C15—C14120.4 (3)
C4—C7—H7A109.5C20—C15—C14121.7 (3)
C4—C7—H7B109.5C17—C16—C15123.3 (3)
H7A—C7—H7B109.5C17—C16—H16118.3
C4—C7—H7C109.5C15—C16—H16118.3
H7A—C7—H7C109.5C16—C17—C18117.0 (3)
H7B—C7—H7C109.5C16—C17—C21121.2 (3)
N1—C8—C6122.2 (3)C18—C17—C21121.9 (3)
N1—C8—H8118.9C17—C18—C19121.9 (4)
C6—C8—H8118.9C17—C18—H18119.0
N1—C9—C10112.6 (3)C19—C18—H18119.0
N1—C9—H9A109.1C20—C19—C18119.7 (3)
C10—C9—H9A109.1C20—C19—H19120.2
N1—C9—H9B109.1C18—C19—H19120.2
C10—C9—H9B109.1O2—C20—C19119.0 (3)
H9A—C9—H9B107.8O2—C20—C15120.8 (3)
C9—C10—C12108.2 (3)C19—C20—C15120.2 (3)
C9—C10—C13110.2 (3)C17—C21—H21A109.5
C12—C10—C13110.4 (3)C17—C21—H21B109.5
C9—C10—C11110.3 (3)H21A—C21—H21B109.5
C12—C10—C11110.5 (3)C17—C21—H21C109.5
C13—C10—C11107.2 (3)H21A—C21—H21C109.5
C10—C11—H11A109.5H21B—C21—H21C109.5
O1—C1—C2—C3179.6 (3)C14—N2—C13—C10−142.8 (3)
C6—C1—C2—C3−0.3 (5)C9—C10—C13—N2−61.8 (4)
C1—C2—C3—C4−0.1 (5)C12—C10—C13—N257.8 (4)
C2—C3—C4—C5−0.6 (5)C11—C10—C13—N2178.1 (3)
C2—C3—C4—C7179.0 (3)C13—N2—C14—C15−178.5 (3)
C3—C4—C5—C61.7 (5)N2—C14—C15—C16178.3 (3)
C7—C4—C5—C6−177.9 (3)N2—C14—C15—C20−1.2 (5)
C4—C5—C6—C1−2.1 (4)C20—C15—C16—C171.3 (4)
C4—C5—C6—C8176.9 (3)C14—C15—C16—C17−178.3 (3)
O1—C1—C6—C5−178.6 (3)C15—C16—C17—C18−1.7 (5)
C2—C1—C6—C51.3 (4)C15—C16—C17—C21177.9 (3)
O1—C1—C6—C82.4 (4)C16—C17—C18—C191.0 (5)
C2—C1—C6—C8−177.7 (3)C21—C17—C18—C19−178.7 (3)
C9—N1—C8—C6178.2 (3)C17—C18—C19—C200.2 (5)
C5—C6—C8—N1−175.7 (3)C18—C19—C20—O2−179.8 (3)
C1—C6—C8—N13.3 (5)C18—C19—C20—C15−0.7 (5)
C8—N1—C9—C10147.8 (3)C16—C15—C20—O2179.1 (3)
N1—C9—C10—C12−178.1 (3)C14—C15—C20—O2−1.3 (5)
N1—C9—C10—C13−57.2 (4)C16—C15—C20—C190.0 (4)
N1—C9—C10—C1160.9 (4)C14—C15—C20—C19179.5 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1A···N10.821.892.620 (3)147
O2—H2A···N20.821.882.609 (4)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯N10.821.892.620 (3)147
O2—H2A⋯N20.821.882.609 (4)147
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  6,6'-Dimeth-oxy-2,2'-[4,5-dimethyl-o-phenyl-enebis(nitrilo-methyl-idyne)]diphenol monohydrate.

Authors:  Hadi Kargar; Reza Kia; Islam Ullah Khan; Atefeh Sahraei
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-06

3.  6,6'-Dieth-oxy-2,2'-[4,5-dimethyl-o-phenyl-enebis(nitrilo-methyl-idyne)]diphenol-ethanol-water (1/1/1).

Authors:  Hadi Kargar; Reza Kia; Arezoo Jamshidvand; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-14

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  1 in total

1.  3,3'-Dimeth-oxy-2,2'-[(4,5-dimethyl-o-phenyl-ene)bis-(nitrilo-methanylyl-idene)]diphenol.

Authors:  Atefeh Sahraei; Hadi Kargar; Reza Kia; Islam Ullah Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-16
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.