| Literature DB >> 21522622 |
Hua-Rong Zhao1, Xiang-Wu Meng.
Abstract
In the title compound, C(12)H(14)N(2)OS, the 1,3-thia-zinane ring displays a screw-boat conformation. In the crystal, pairs of centrosymmetrically related mol-ecules are linked by pairs of N-H⋯O hydrogen bonds into dimers. C-H⋯π inter-actions occur between adjacent dimers.Entities:
Year: 2010 PMID: 21522622 PMCID: PMC3050269 DOI: 10.1107/S1600536810051147
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H14N2OS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1436 reflections | |
| θ = 2.8–29.2° | |
| µ = 0.25 mm−1 | |
| α = 114.184 (7)° | |
| β = 94.647 (5)° | Block, colorless |
| γ = 97.910 (5)° | 0.48 × 0.28 × 0.23 mm |
| Oxford Diffraction Xcalibur Atlas Gemini ultra diffractometer | 2188 independent reflections |
| Radiation source: fine-focus sealed tube | 1569 reflections with |
| graphite | |
| Detector resolution: 10.3592 pixels mm-1 | θmax = 25.4°, θmin = 2.9° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4061 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2188 reflections | (Δ/σ)max < 0.001 |
| 147 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.55185 (9) | 0.52363 (7) | 0.33010 (8) | 0.0523 (3) | |
| O1 | 0.8076 (2) | 1.03840 (19) | 0.5892 (2) | 0.0549 (5) | |
| N1 | 0.9131 (3) | 0.5481 (2) | 0.2917 (2) | 0.0440 (5) | |
| N2 | 0.8280 (3) | 0.7918 (2) | 0.4195 (2) | 0.0421 (5) | |
| H2 | 0.9236 | 0.8376 | 0.3961 | 0.051* | |
| C1 | 0.7441 (4) | −0.1475 (3) | 0.0075 (4) | 0.0823 (11) | |
| H1A | 0.6145 | −0.1836 | −0.0386 | 0.123* | |
| H1B | 0.7650 | −0.1892 | 0.0797 | 0.123* | |
| H1C | 0.8247 | −0.1863 | −0.0658 | 0.123* | |
| C2 | 0.7884 (3) | 0.0354 (3) | 0.0820 (3) | 0.0518 (7) | |
| C3 | 0.8622 (4) | 0.1187 (3) | 0.2294 (3) | 0.0580 (8) | |
| H3 | 0.8850 | 0.0615 | 0.2848 | 0.070* | |
| C4 | 0.9027 (4) | 0.2862 (3) | 0.2960 (3) | 0.0501 (7) | |
| H4 | 0.9552 | 0.3403 | 0.3952 | 0.060* | |
| C5 | 0.8663 (3) | 0.3743 (3) | 0.2171 (3) | 0.0399 (6) | |
| C6 | 0.7938 (3) | 0.2946 (3) | 0.0679 (3) | 0.0445 (6) | |
| C7 | 0.7569 (3) | 0.1258 (3) | 0.0048 (3) | 0.0540 (8) | |
| H7 | 0.7082 | 0.0710 | −0.0951 | 0.065* | |
| C8 | 0.7535 (4) | 0.3858 (4) | −0.0223 (3) | 0.0680 (9) | |
| H8B | 0.7962 | 0.3363 | −0.1158 | 0.102* | |
| H8C | 0.8184 | 0.4964 | 0.0293 | 0.102* | |
| H8A | 0.6201 | 0.3829 | −0.0379 | 0.102* | |
| C9 | 0.7833 (3) | 0.6224 (3) | 0.3455 (3) | 0.0360 (6) | |
| C10 | 0.4370 (3) | 0.6924 (3) | 0.4178 (3) | 0.0544 (7) | |
| H10B | 0.4074 | 0.7384 | 0.3491 | 0.065* | |
| H10A | 0.3191 | 0.6545 | 0.4433 | 0.065* | |
| C11 | 0.5592 (3) | 0.8223 (3) | 0.5554 (3) | 0.0477 (7) | |
| H11B | 0.4893 | 0.9078 | 0.6024 | 0.057* | |
| H11A | 0.5883 | 0.7760 | 0.6239 | 0.057* | |
| C12 | 0.7393 (3) | 0.8938 (3) | 0.5241 (3) | 0.0399 (6) |
| S1 | 0.0440 (4) | 0.0327 (4) | 0.0669 (5) | 0.0023 (3) | 0.0113 (3) | 0.0090 (3) |
| O1 | 0.0525 (11) | 0.0270 (9) | 0.0719 (13) | 0.0066 (8) | 0.0125 (9) | 0.0076 (9) |
| N1 | 0.0416 (12) | 0.0317 (11) | 0.0496 (13) | 0.0072 (9) | 0.0078 (10) | 0.0080 (10) |
| N2 | 0.0430 (12) | 0.0269 (10) | 0.0518 (13) | 0.0043 (8) | 0.0119 (10) | 0.0122 (10) |
| C1 | 0.0548 (19) | 0.0368 (16) | 0.125 (3) | 0.0045 (14) | 0.0134 (19) | 0.0060 (18) |
| C2 | 0.0361 (14) | 0.0315 (14) | 0.071 (2) | 0.0091 (11) | 0.0085 (13) | 0.0047 (14) |
| C3 | 0.0553 (17) | 0.0445 (16) | 0.076 (2) | 0.0150 (13) | 0.0086 (15) | 0.0258 (16) |
| C4 | 0.0546 (16) | 0.0413 (15) | 0.0446 (16) | 0.0119 (12) | 0.0002 (12) | 0.0094 (13) |
| C5 | 0.0353 (13) | 0.0336 (13) | 0.0439 (15) | 0.0107 (10) | 0.0076 (11) | 0.0081 (12) |
| C6 | 0.0384 (14) | 0.0434 (15) | 0.0439 (16) | 0.0091 (11) | 0.0055 (11) | 0.0108 (13) |
| C7 | 0.0403 (15) | 0.0465 (16) | 0.0502 (17) | 0.0053 (12) | 0.0024 (12) | −0.0023 (14) |
| C8 | 0.075 (2) | 0.075 (2) | 0.0517 (19) | 0.0139 (17) | 0.0047 (15) | 0.0268 (17) |
| C9 | 0.0401 (13) | 0.0299 (12) | 0.0344 (13) | 0.0056 (10) | 0.0024 (10) | 0.0110 (11) |
| C10 | 0.0406 (15) | 0.0461 (15) | 0.0656 (19) | 0.0094 (12) | 0.0104 (13) | 0.0123 (14) |
| C11 | 0.0487 (15) | 0.0364 (14) | 0.0521 (17) | 0.0107 (11) | 0.0135 (12) | 0.0112 (13) |
| C12 | 0.0425 (14) | 0.0312 (13) | 0.0440 (15) | 0.0101 (11) | 0.0042 (11) | 0.0133 (12) |
| S1—C9 | 1.754 (2) | C4—C5 | 1.381 (4) |
| S1—C10 | 1.798 (3) | C4—H4 | 0.9300 |
| O1—C12 | 1.223 (3) | C5—C6 | 1.388 (3) |
| N1—C9 | 1.264 (3) | C6—C7 | 1.391 (3) |
| N1—C5 | 1.436 (3) | C6—C8 | 1.503 (4) |
| N2—C12 | 1.365 (3) | C7—H7 | 0.9300 |
| N2—C9 | 1.400 (3) | C8—H8B | 0.9600 |
| N2—H2 | 0.8600 | C8—H8C | 0.9600 |
| C1—C2 | 1.509 (3) | C8—H8A | 0.9600 |
| C1—H1A | 0.9600 | C10—C11 | 1.510 (3) |
| C1—H1B | 0.9600 | C10—H10B | 0.9700 |
| C1—H1C | 0.9600 | C10—H10A | 0.9700 |
| C2—C7 | 1.378 (4) | C11—C12 | 1.492 (3) |
| C2—C3 | 1.378 (4) | C11—H11B | 0.9700 |
| C3—C4 | 1.381 (3) | C11—H11A | 0.9700 |
| C3—H3 | 0.9300 | ||
| C9—S1—C10 | 101.58 (11) | C2—C7—H7 | 118.2 |
| C9—N1—C5 | 117.4 (2) | C6—C7—H7 | 118.2 |
| C12—N2—C9 | 128.4 (2) | C6—C8—H8B | 109.5 |
| C12—N2—H2 | 115.8 | C6—C8—H8C | 109.5 |
| C9—N2—H2 | 115.8 | H8B—C8—H8C | 109.5 |
| C2—C1—H1A | 109.5 | C6—C8—H8A | 109.5 |
| C2—C1—H1B | 109.5 | H8B—C8—H8A | 109.5 |
| H1A—C1—H1B | 109.5 | H8C—C8—H8A | 109.5 |
| C2—C1—H1C | 109.5 | N1—C9—N2 | 117.8 (2) |
| H1A—C1—H1C | 109.5 | N1—C9—S1 | 123.15 (18) |
| H1B—C1—H1C | 109.5 | N2—C9—S1 | 119.04 (17) |
| C7—C2—C3 | 117.3 (2) | C11—C10—S1 | 111.74 (18) |
| C7—C2—C1 | 121.2 (3) | C11—C10—H10B | 109.3 |
| C3—C2—C1 | 121.5 (3) | S1—C10—H10B | 109.3 |
| C2—C3—C4 | 120.9 (3) | C11—C10—H10A | 109.3 |
| C2—C3—H3 | 119.6 | S1—C10—H10A | 109.3 |
| C4—C3—H3 | 119.6 | H10B—C10—H10A | 107.9 |
| C3—C4—C5 | 120.7 (3) | C12—C11—C10 | 112.6 (2) |
| C3—C4—H4 | 119.6 | C12—C11—H11B | 109.1 |
| C5—C4—H4 | 119.6 | C10—C11—H11B | 109.1 |
| C4—C5—C6 | 120.0 (2) | C12—C11—H11A | 109.1 |
| C4—C5—N1 | 118.3 (2) | C10—C11—H11A | 109.1 |
| C6—C5—N1 | 121.6 (2) | H11B—C11—H11A | 107.8 |
| C5—C6—C7 | 117.3 (3) | O1—C12—N2 | 120.2 (2) |
| C5—C6—C8 | 121.7 (2) | O1—C12—C11 | 122.0 (2) |
| C7—C6—C8 | 120.9 (2) | N2—C12—C11 | 117.8 (2) |
| C2—C7—C6 | 123.7 (3) | ||
| C7—C2—C3—C4 | −0.1 (4) | C8—C6—C7—C2 | −179.1 (2) |
| C1—C2—C3—C4 | 179.7 (3) | C5—N1—C9—N2 | 179.5 (2) |
| C2—C3—C4—C5 | 1.4 (4) | C5—N1—C9—S1 | −1.1 (3) |
| C3—C4—C5—C6 | −2.1 (4) | C12—N2—C9—N1 | −156.8 (2) |
| C3—C4—C5—N1 | −179.4 (2) | C12—N2—C9—S1 | 23.7 (3) |
| C9—N1—C5—C4 | −94.8 (3) | C10—S1—C9—N1 | −177.0 (2) |
| C9—N1—C5—C6 | 87.9 (3) | C10—S1—C9—N2 | 2.4 (2) |
| C4—C5—C6—C7 | 1.4 (4) | C9—S1—C10—C11 | −41.6 (2) |
| N1—C5—C6—C7 | 178.6 (2) | S1—C10—C11—C12 | 62.2 (3) |
| C4—C5—C6—C8 | −179.6 (2) | C9—N2—C12—O1 | 172.6 (2) |
| N1—C5—C6—C8 | −2.4 (4) | C9—N2—C12—C11 | −7.2 (4) |
| C3—C2—C7—C6 | −0.6 (4) | C10—C11—C12—O1 | 141.7 (2) |
| C1—C2—C7—C6 | 179.6 (2) | C10—C11—C12—N2 | −38.5 (3) |
| C5—C6—C7—C2 | 0.0 (4) |
| Cg2 is the centroid of the C2–C7 benzene ring. |
| H··· | ||||
| N2—H2···O1i | 0.86 | 2.08 | 2.900 (3) | 161 |
| C1—H1C···Cg2ii | 0.96 | 2.72 | 3.591 (3) | 152 |
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the C2–C7 benzene ring.
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.86 | 2.08 | 2.900 (3) | 161 |
| C1—H1 | 0.96 | 2.72 | 3.591 (3) | 152 |
Symmetry codes: (i) ; (ii) .