| Literature DB >> 21522615 |
Hamed Khemiri, Samah Toumi Akriche, Salem S Al-Deyab, Mohamed Rzaigui.
Abstract
In the crystal structure of the titleEntities:
Year: 2010 PMID: 21522615 PMCID: PMC3050257 DOI: 10.1107/S1600536810051159
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H16N+·H2O4P−·H3O4P | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 9–11° | |
| µ = 0.31 mm−1 | |
| β = 102.686 (19)° | Prism, colourless |
| 0.45 × 0.30 × 0.20 mm | |
| Enraf–Nonius TurboCAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 2.6° |
| graphite | |
| non–profiled ω scans | |
| 5173 measured reflections | |
| 2776 independent reflections | 2 standard reflections every 120 min |
| 2417 reflections with | intensity decay: 4% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2776 reflections | (Δ/σ)max = 0.001 |
| 198 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.47 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.89551 (6) | 0.42643 (7) | 0.69762 (2) | 0.02954 (17) | |
| P2 | 0.57483 (6) | 0.63702 (6) | 0.78754 (2) | 0.02854 (16) | |
| O1 | 0.90841 (18) | 0.36241 (19) | 0.75328 (6) | 0.0396 (4) | |
| O2 | 0.9067 (2) | 0.6272 (2) | 0.69495 (7) | 0.0520 (5) | |
| H2 | 0.9850 | 0.6616 | 0.7184 | 0.078* | |
| O3 | 0.72469 (17) | 0.39370 (19) | 0.65968 (6) | 0.0391 (4) | |
| H3 | 0.6783 | 0.3113 | 0.6706 | 0.059* | |
| O4 | 1.0255 (2) | 0.3435 (3) | 0.67058 (7) | 0.0600 (5) | |
| H4 | 1.1176 | 0.3437 | 0.6913 | 0.090* | |
| O5 | 0.69580 (18) | 0.48369 (19) | 0.80976 (6) | 0.0388 (4) | |
| H5 | 0.7548 | 0.4612 | 0.7886 | 0.058* | |
| O6 | 0.49043 (19) | 0.59476 (19) | 0.72822 (6) | 0.0387 (4) | |
| H6 | 0.4372 | 0.5041 | 0.7269 | 0.058* | |
| O7 | 0.66900 (17) | 0.80396 (18) | 0.78532 (7) | 0.0400 (4) | |
| O8 | 0.44861 (18) | 0.63937 (18) | 0.82220 (6) | 0.0379 (4) | |
| N1 | 0.6019 (2) | 0.8023 (2) | 0.64703 (7) | 0.0376 (4) | |
| H1A | 0.5247 | 0.7406 | 0.6585 | 0.056* | |
| H1B | 0.5939 | 0.9133 | 0.6558 | 0.056* | |
| H1C | 0.7036 | 0.7626 | 0.6621 | 0.056* | |
| C1 | 0.5743 (3) | 0.7867 (3) | 0.58854 (9) | 0.0389 (5) | |
| C2 | 0.4324 (3) | 0.7015 (3) | 0.56111 (10) | 0.0469 (6) | |
| C3 | 0.4120 (4) | 0.6914 (3) | 0.50585 (11) | 0.0575 (7) | |
| H3A | 0.3183 | 0.6356 | 0.4856 | 0.069* | |
| C4 | 0.5292 (4) | 0.7631 (4) | 0.48074 (10) | 0.0613 (7) | |
| H4A | 0.5136 | 0.7546 | 0.4439 | 0.074* | |
| C5 | 0.6679 (4) | 0.8466 (3) | 0.50942 (10) | 0.0555 (7) | |
| H5A | 0.7453 | 0.8938 | 0.4917 | 0.067* | |
| C6 | 0.6953 (3) | 0.8624 (3) | 0.56494 (9) | 0.0452 (6) | |
| C7 | 0.3079 (4) | 0.6215 (4) | 0.59107 (12) | 0.0626 (7) | |
| H7A | 0.3650 | 0.5291 | 0.6136 | 0.075* | |
| H7B | 0.2783 | 0.7095 | 0.6144 | 0.075* | |
| C8 | 0.1485 (4) | 0.5490 (5) | 0.55760 (15) | 0.0829 (10) | |
| H8A | 0.0873 | 0.6398 | 0.5362 | 0.124* | |
| H8B | 0.0812 | 0.5013 | 0.5804 | 0.124* | |
| H8C | 0.1750 | 0.4594 | 0.5348 | 0.124* | |
| C9 | 0.8439 (4) | 0.9572 (4) | 0.59828 (11) | 0.0589 (7) | |
| H9A | 0.8011 | 1.0495 | 0.6173 | 0.071* | |
| H9B | 0.9036 | 0.8768 | 0.6248 | 0.071* | |
| C10 | 0.9693 (4) | 1.0357 (5) | 0.56996 (13) | 0.0706 (8) | |
| H10A | 1.0219 | 0.9453 | 0.5537 | 0.106* | |
| H10B | 1.0532 | 1.0977 | 0.5952 | 0.106* | |
| H10C | 0.9128 | 1.1143 | 0.5429 | 0.106* |
| P1 | 0.0263 (3) | 0.0247 (3) | 0.0378 (3) | 0.00059 (19) | 0.0075 (2) | 0.0007 (2) |
| P2 | 0.0267 (3) | 0.0179 (3) | 0.0428 (3) | 0.00200 (18) | 0.0113 (2) | 0.0022 (2) |
| O1 | 0.0415 (8) | 0.0350 (8) | 0.0435 (8) | 0.0127 (6) | 0.0116 (7) | 0.0082 (6) |
| O2 | 0.0617 (11) | 0.0258 (9) | 0.0574 (11) | −0.0121 (7) | −0.0108 (8) | 0.0056 (7) |
| O3 | 0.0319 (8) | 0.0319 (8) | 0.0508 (9) | −0.0057 (6) | 0.0033 (7) | 0.0076 (7) |
| O4 | 0.0376 (9) | 0.0916 (15) | 0.0514 (10) | 0.0181 (9) | 0.0113 (7) | −0.0113 (10) |
| O5 | 0.0412 (8) | 0.0293 (8) | 0.0496 (9) | 0.0141 (6) | 0.0182 (7) | 0.0093 (7) |
| O6 | 0.0469 (9) | 0.0261 (8) | 0.0437 (8) | −0.0069 (6) | 0.0111 (7) | 0.0043 (6) |
| O7 | 0.0295 (7) | 0.0216 (7) | 0.0689 (10) | −0.0021 (6) | 0.0105 (7) | 0.0031 (7) |
| O8 | 0.0375 (8) | 0.0277 (8) | 0.0533 (9) | 0.0065 (6) | 0.0203 (7) | 0.0026 (7) |
| N1 | 0.0473 (10) | 0.0293 (9) | 0.0390 (10) | 0.0005 (8) | 0.0154 (8) | 0.0022 (7) |
| C1 | 0.0564 (13) | 0.0247 (10) | 0.0368 (11) | 0.0084 (9) | 0.0130 (10) | 0.0011 (8) |
| C2 | 0.0609 (14) | 0.0301 (12) | 0.0472 (13) | 0.0067 (11) | 0.0065 (11) | 0.0013 (10) |
| C3 | 0.0760 (18) | 0.0397 (14) | 0.0497 (15) | 0.0056 (13) | −0.0014 (13) | −0.0045 (11) |
| C4 | 0.101 (2) | 0.0459 (15) | 0.0362 (13) | 0.0114 (15) | 0.0134 (14) | −0.0023 (11) |
| C5 | 0.0851 (19) | 0.0433 (14) | 0.0443 (14) | 0.0056 (13) | 0.0279 (13) | 0.0005 (11) |
| C6 | 0.0645 (15) | 0.0335 (12) | 0.0421 (12) | 0.0054 (10) | 0.0215 (11) | 0.0010 (10) |
| C7 | 0.0640 (17) | 0.0617 (18) | 0.0573 (16) | −0.0121 (14) | 0.0027 (13) | 0.0002 (13) |
| C8 | 0.074 (2) | 0.079 (2) | 0.089 (2) | −0.0143 (18) | 0.0033 (18) | −0.0070 (19) |
| C9 | 0.0748 (18) | 0.0567 (16) | 0.0522 (15) | −0.0140 (14) | 0.0290 (13) | −0.0032 (12) |
| C10 | 0.077 (2) | 0.077 (2) | 0.0653 (18) | −0.0115 (17) | 0.0303 (15) | 0.0042 (16) |
| P1—O1 | 1.4937 (16) | C2—C7 | 1.532 (4) |
| P1—O4 | 1.5296 (16) | C3—C4 | 1.381 (4) |
| P1—O3 | 1.5364 (15) | C3—H3A | 0.9300 |
| P1—O2 | 1.5525 (17) | C4—C5 | 1.368 (4) |
| P2—O8 | 1.5022 (15) | C4—H4A | 0.9300 |
| P2—O7 | 1.5063 (15) | C5—C6 | 1.399 (3) |
| P2—O6 | 1.5622 (16) | C5—H5A | 0.9300 |
| P2—O5 | 1.5652 (14) | C6—C9 | 1.511 (4) |
| O2—H2 | 0.8200 | C7—C8 | 1.501 (4) |
| O3—H3 | 0.8200 | C7—H7A | 0.9700 |
| O4—H4 | 0.8200 | C7—H7B | 0.9700 |
| O5—H5 | 0.8200 | C8—H8A | 0.9600 |
| O6—H6 | 0.8200 | C8—H8B | 0.9600 |
| N1—C1 | 1.474 (3) | C8—H8C | 0.9600 |
| N1—H1A | 0.8900 | C9—C10 | 1.507 (4) |
| N1—H1B | 0.8900 | C9—H9A | 0.9700 |
| N1—H1C | 0.8900 | C9—H9B | 0.9700 |
| C1—C2 | 1.382 (3) | C10—H10A | 0.9600 |
| C1—C6 | 1.395 (3) | C10—H10B | 0.9600 |
| C2—C3 | 1.394 (4) | C10—H10C | 0.9600 |
| O1—P1—O4 | 112.72 (10) | C5—C4—H4A | 119.6 |
| O1—P1—O3 | 114.58 (9) | C3—C4—H4A | 119.6 |
| O4—P1—O3 | 105.49 (10) | C4—C5—C6 | 121.2 (3) |
| O1—P1—O2 | 112.27 (10) | C4—C5—H5A | 119.4 |
| O4—P1—O2 | 110.04 (12) | C6—C5—H5A | 119.4 |
| O3—P1—O2 | 100.93 (9) | C1—C6—C5 | 115.9 (2) |
| O8—P2—O7 | 115.74 (9) | C1—C6—C9 | 120.9 (2) |
| O8—P2—O6 | 111.54 (9) | C5—C6—C9 | 123.2 (2) |
| O7—P2—O6 | 105.11 (9) | C8—C7—C2 | 116.7 (3) |
| O8—P2—O5 | 104.66 (8) | C8—C7—H7A | 108.1 |
| O7—P2—O5 | 111.86 (9) | C2—C7—H7A | 108.1 |
| O6—P2—O5 | 107.82 (9) | C8—C7—H7B | 108.1 |
| P1—O2—H2 | 109.5 | C2—C7—H7B | 108.1 |
| P1—O3—H3 | 109.5 | H7A—C7—H7B | 107.3 |
| P1—O4—H4 | 109.5 | C7—C8—H8A | 109.5 |
| P2—O5—H5 | 109.5 | C7—C8—H8B | 109.5 |
| P2—O6—H6 | 109.5 | H8A—C8—H8B | 109.5 |
| C1—N1—H1A | 109.5 | C7—C8—H8C | 109.5 |
| C1—N1—H1B | 109.5 | H8A—C8—H8C | 109.5 |
| H1A—N1—H1B | 109.5 | H8B—C8—H8C | 109.5 |
| C1—N1—H1C | 109.5 | C10—C9—C6 | 117.8 (2) |
| H1A—N1—H1C | 109.5 | C10—C9—H9A | 107.8 |
| H1B—N1—H1C | 109.5 | C6—C9—H9A | 107.8 |
| C2—C1—C6 | 124.9 (2) | C10—C9—H9B | 107.8 |
| C2—C1—N1 | 118.8 (2) | C6—C9—H9B | 107.8 |
| C6—C1—N1 | 116.4 (2) | H9A—C9—H9B | 107.2 |
| C1—C2—C3 | 116.4 (2) | C9—C10—H10A | 109.5 |
| C1—C2—C7 | 120.6 (2) | C9—C10—H10B | 109.5 |
| C3—C2—C7 | 123.0 (2) | H10A—C10—H10B | 109.5 |
| C4—C3—C2 | 120.8 (3) | C9—C10—H10C | 109.5 |
| C4—C3—H3A | 119.6 | H10A—C10—H10C | 109.5 |
| C2—C3—H3A | 119.6 | H10B—C10—H10C | 109.5 |
| C5—C4—C3 | 120.9 (2) |
| H··· | ||||
| O2—H2···O1i | 0.82 | 1.84 | 2.540 (2) | 142. |
| O3—H3···O8ii | 0.82 | 1.72 | 2.520 (2) | 166. |
| O4—H4···O7iii | 0.82 | 1.74 | 2.521 (2) | 158. |
| O5—H5···O1 | 0.82 | 1.86 | 2.664 (2) | 165. |
| O6—H6···O7ii | 0.82 | 1.76 | 2.577 (2) | 171. |
| N1—H1A···O6 | 0.89 | 2.18 | 2.927 (2) | 141. |
| N1—H1B···O8iv | 0.89 | 1.89 | 2.772 (2) | 172. |
| N1—H1C···O2 | 0.89 | 1.98 | 2.861 (3) | 168. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O1i | 0.82 | 1.84 | 2.540 (2) | 142 |
| O3—H3⋯O8ii | 0.82 | 1.72 | 2.520 (2) | 166 |
| O4—H4⋯O7iii | 0.82 | 1.74 | 2.521 (2) | 158 |
| O5—H5⋯O1 | 0.82 | 1.86 | 2.664 (2) | 165 |
| O6—H6⋯O7ii | 0.82 | 1.76 | 2.577 (2) | 171 |
| N1—H1 | 0.89 | 2.18 | 2.927 (2) | 141 |
| N1—H1 | 0.89 | 1.89 | 2.772 (2) | 172 |
| N1—H1 | 0.89 | 1.98 | 2.861 (3) | 168 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .