Literature DB >> 21522558

[N-Benzyl-N-(diphenyl-phosphanylmeth-yl)pyridin-2-amine]-chloridomethyl-platinum(II).

Zhi-Wei Wang1, Peng Qiao, Zi-Jia Wang, Chong-Qing Wan.   

Abstract

In the mononuclear title complex, [Pt(CH(3))Cl(C(25)H(23)N(2)P)], the N-benzyl-N-(diphenyl-phosphanylmeth-yl)pyridin-2-amine functions as a bidentate ligand with the pyridyl N atom and the phosphine P atom chelating the Pt(II) ion, forming a six-membered metallocycle. The Pt(II) atom adopts a square-planar coordination geometry with one methyl group and one chloride ligand bonding to the metal center in a cis relationship. C-H⋯π and C-H⋯Cl inter-actions help to consolidate the packing.

Entities:  

Year:  2010        PMID: 21522558      PMCID: PMC3050312          DOI: 10.1107/S1600536810049652

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For coordination complexes with hemilabile ligands with PN donor sets, see: Espinet & Soulantica (1999 ▶); Song et al. (2001 ▶); Wang et al. (2010 ▶). For coordination complexes with the N-benzyl-N-(diphenyl­phosphanylmeth­yl)pyridin-2-amine ligand, see: Li et al. (2003 ▶, 2006 ▶). For hydrogen bonds, see: Desiraju & Steiner (1999 ▶) and for C—H⋯π inter­actions, see: Umezawa et al. (1998 ▶).

Experimental

Crystal data

[Pt(CH3)Cl(C25H23N2P)] M = 628.00 Triclinic, a = 9.538 (3) Å b = 10.770 (3) Å c = 13.125 (4) Å α = 98.367 (4)° β = 106.256 (4)° γ = 107.266 (5)° V = 1197.0 (6) Å3 Z = 2 Mo Kα radiation μ = 6.06 mm−1 T = 293 K 0.33 × 0.24 × 0.20 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.675, T max = 1.000 6265 measured reflections 4201 independent reflections 3270 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.123 S = 1.01 4201 reflections 281 parameters H-atom parameters constrained Δρmax = 2.18 e Å−3 Δρmin = −2.33 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: APEX2 and SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810049652/zq2076sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049652/zq2076Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pt(CH3)Cl(C25H23N2P)]V = 1197.0 (6) Å3
Mr = 628.00Z = 2
Triclinic, P1F(000) = 612
Hall symbol: -P 1Dx = 1.742 Mg m3
a = 9.538 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.770 (3) ŵ = 6.06 mm1
c = 13.125 (4) ÅT = 293 K
α = 98.367 (4)°Block, colourless
β = 106.256 (4)°0.33 × 0.24 × 0.20 mm
γ = 107.266 (5)°
Bruker APEXII CCD area-detector diffractometer4201 independent reflections
Radiation source: fine-focus sealed tube3270 reflections with I > 2σ(I)
graphiteRint = 0.041
ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −11→6
Tmin = 0.675, Tmax = 1.000k = −12→12
6265 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.123H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.065P)2] P = (Fo2 + 2Fc2)/3
4201 reflections(Δ/σ)max = 0.001
281 parametersΔρmax = 2.18 e Å3
0 restraintsΔρmin = −2.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pt10.99999 (4)0.54883 (4)0.70540 (3)0.03520 (15)
Cl11.1825 (3)0.4495 (3)0.6820 (3)0.0641 (8)
P10.8409 (3)0.6473 (2)0.73503 (19)0.0340 (5)
N10.8123 (9)0.3822 (8)0.5717 (6)0.0402 (19)
N20.6167 (9)0.4091 (8)0.6379 (7)0.048 (2)
C11.1828 (11)0.6965 (10)0.8263 (9)0.051 (3)
H1A1.24170.75760.79410.077*
H1B1.24890.65720.86910.077*
H1C1.14380.74420.87260.077*
C20.6662 (11)0.3300 (10)0.5714 (8)0.043 (2)
C30.5668 (12)0.2033 (10)0.5068 (8)0.053 (3)
H30.46910.16500.51250.063*
C40.6138 (14)0.1358 (11)0.4352 (9)0.057 (3)
H40.54990.05000.39220.069*
C50.7594 (14)0.1978 (11)0.4276 (9)0.057 (3)
H50.79200.15680.37590.068*
C60.8527 (12)0.3189 (11)0.4967 (8)0.045 (2)
H60.95020.35960.49130.054*
C70.4833 (11)0.3477 (11)0.6713 (9)0.054 (3)
H7A0.39190.30190.60600.064*
H7B0.46300.41840.71280.064*
C80.5046 (12)0.2502 (10)0.7386 (8)0.046 (3)
C90.6496 (15)0.2476 (13)0.7969 (10)0.066 (3)
H90.74070.30580.79260.080*
C100.656 (2)0.1572 (17)0.8612 (12)0.090 (5)
H100.75360.15580.89970.109*
C110.527 (3)0.0706 (16)0.8707 (13)0.098 (6)
H110.53520.00920.91300.117*
C120.385 (2)0.0762 (14)0.8161 (14)0.090 (5)
H120.29510.02150.82480.108*
C130.3726 (14)0.1606 (12)0.7495 (11)0.067 (4)
H130.27420.15880.71010.080*
C140.6497 (11)0.5486 (10)0.6317 (8)0.042 (2)
H14A0.57020.58020.64610.051*
H14B0.65100.55670.55920.051*
C150.7980 (11)0.6491 (9)0.8610 (8)0.039 (2)
C160.6740 (13)0.6856 (12)0.8728 (9)0.058 (3)
H160.61840.71640.81830.069*
C170.6329 (15)0.6761 (14)0.9664 (11)0.072 (4)
H170.54940.70000.97330.086*
C180.7140 (15)0.6323 (12)1.0477 (10)0.063 (3)
H180.68680.62711.11010.075*
C190.8370 (15)0.5957 (11)1.0363 (9)0.061 (3)
H190.89230.56401.09040.073*
C200.8774 (13)0.6066 (10)0.9431 (8)0.048 (3)
H200.96210.58400.93700.058*
C210.8791 (11)0.8172 (10)0.7178 (9)0.044 (2)
C220.9235 (16)0.9260 (11)0.8040 (12)0.075 (4)
H220.93220.91340.87380.090*
C230.955 (2)1.0538 (16)0.788 (2)0.107 (6)
H230.99011.12640.84810.129*
C240.9375 (19)1.0761 (16)0.688 (2)0.111 (7)
H240.95311.16220.67790.133*
C250.8956 (16)0.9686 (19)0.6016 (16)0.095 (5)
H250.88330.98260.53180.115*
C260.8710 (13)0.8394 (13)0.6154 (10)0.062 (3)
H260.84930.76870.55660.074*
U11U22U33U12U13U23
Pt10.0336 (2)0.0378 (2)0.0384 (2)0.01434 (16)0.01476 (16)0.01323 (16)
Cl10.0534 (16)0.084 (2)0.073 (2)0.0448 (16)0.0267 (15)0.0198 (17)
P10.0353 (13)0.0311 (13)0.0347 (13)0.0130 (10)0.0094 (10)0.0080 (10)
N10.046 (5)0.037 (5)0.041 (5)0.014 (4)0.017 (4)0.016 (4)
N20.034 (4)0.043 (5)0.066 (6)0.012 (4)0.021 (4)0.007 (4)
C10.044 (6)0.042 (6)0.058 (7)0.007 (5)0.003 (5)0.027 (5)
C20.036 (5)0.038 (6)0.053 (6)0.015 (5)0.011 (5)0.008 (5)
C30.048 (6)0.042 (6)0.052 (7)0.008 (5)0.012 (5)−0.007 (5)
C40.067 (8)0.037 (6)0.059 (7)0.007 (5)0.024 (6)0.005 (5)
C50.082 (8)0.039 (6)0.049 (7)0.022 (6)0.026 (6)0.003 (5)
C60.056 (6)0.054 (7)0.043 (6)0.031 (5)0.031 (5)0.015 (5)
C70.033 (5)0.052 (7)0.068 (7)0.009 (5)0.020 (5)−0.001 (6)
C80.054 (7)0.033 (6)0.046 (6)0.003 (5)0.031 (5)−0.009 (5)
C90.061 (8)0.067 (9)0.065 (8)0.016 (7)0.023 (6)0.010 (7)
C100.119 (13)0.102 (13)0.071 (10)0.055 (11)0.039 (9)0.034 (9)
C110.182 (19)0.068 (11)0.074 (11)0.050 (12)0.083 (13)0.023 (8)
C120.111 (13)0.050 (9)0.106 (13)−0.005 (8)0.073 (11)0.008 (8)
C130.059 (7)0.052 (8)0.080 (9)0.000 (6)0.045 (7)−0.011 (7)
C140.038 (5)0.046 (6)0.048 (6)0.026 (5)0.010 (5)0.011 (5)
C150.043 (5)0.033 (5)0.040 (5)0.013 (4)0.013 (4)0.004 (4)
C160.051 (7)0.072 (8)0.054 (7)0.033 (6)0.015 (5)0.007 (6)
C170.075 (9)0.090 (10)0.074 (9)0.044 (8)0.051 (7)0.004 (8)
C180.093 (10)0.054 (8)0.058 (8)0.030 (7)0.049 (7)0.012 (6)
C190.090 (9)0.054 (8)0.058 (7)0.037 (7)0.038 (7)0.021 (6)
C200.059 (7)0.046 (6)0.046 (6)0.028 (5)0.023 (5)0.003 (5)
C210.038 (5)0.039 (6)0.060 (7)0.018 (5)0.016 (5)0.019 (5)
C220.096 (10)0.028 (7)0.107 (11)0.012 (6)0.058 (9)0.012 (7)
C230.106 (13)0.044 (9)0.18 (2)0.013 (8)0.074 (13)0.024 (11)
C240.088 (11)0.042 (9)0.23 (3)0.026 (8)0.081 (14)0.056 (13)
C250.062 (9)0.111 (14)0.143 (15)0.034 (9)0.042 (9)0.100 (13)
C260.052 (7)0.064 (8)0.070 (8)0.019 (6)0.016 (6)0.030 (7)
Pt1—C12.039 (10)C10—H100.9300
Pt1—P12.178 (2)C11—C121.37 (2)
Pt1—N12.219 (8)C11—H110.9300
Pt1—Cl12.361 (3)C12—C131.36 (2)
P1—C151.811 (10)C12—H120.9300
P1—C211.818 (10)C13—H130.9300
P1—C141.828 (10)C14—H14A0.9700
N1—C61.326 (12)C14—H14B0.9700
N1—C21.338 (12)C15—C201.355 (13)
N2—C21.401 (12)C15—C161.392 (13)
N2—C141.461 (12)C16—C171.399 (16)
N2—C71.464 (13)C16—H160.9300
C1—H1A0.9600C17—C181.364 (17)
C1—H1B0.9600C17—H170.9300
C1—H1C0.9600C18—C191.382 (15)
C2—C31.387 (13)C18—H180.9300
C3—C41.357 (14)C19—C201.392 (15)
C3—H30.9300C19—H190.9300
C4—C51.389 (16)C20—H200.9300
C4—H40.9300C21—C221.372 (15)
C5—C61.352 (15)C21—C261.385 (15)
C5—H50.9300C22—C231.38 (2)
C6—H60.9300C22—H220.9300
C7—C81.490 (15)C23—C241.34 (2)
C7—H7A0.9700C23—H230.9300
C7—H7B0.9700C24—C251.37 (2)
C8—C91.391 (16)C24—H240.9300
C8—C131.399 (15)C25—C261.388 (19)
C9—C101.383 (19)C25—H250.9300
C9—H90.9300C26—H260.9300
C10—C111.36 (2)
C1—Pt1—P190.3 (3)C9—C10—H10118.6
C1—Pt1—N1176.2 (4)C10—C11—C12118.2 (15)
P1—Pt1—N193.5 (2)C10—C11—H11120.9
C1—Pt1—Cl186.8 (3)C12—C11—H11120.9
P1—Pt1—Cl1176.99 (10)C13—C12—C11120.7 (14)
N1—Pt1—Cl189.5 (2)C13—C12—H12119.6
C15—P1—C21105.9 (5)C11—C12—H12119.6
C15—P1—C14102.0 (5)C12—C13—C8121.7 (13)
C21—P1—C14104.8 (5)C12—C13—H13119.1
C15—P1—Pt1119.0 (3)C8—C13—H13119.1
C21—P1—Pt1117.2 (3)N2—C14—P1107.1 (6)
C14—P1—Pt1106.0 (3)N2—C14—H14A110.3
C6—N1—C2118.0 (9)P1—C14—H14A110.3
C6—N1—Pt1117.7 (7)N2—C14—H14B110.3
C2—N1—Pt1123.5 (7)P1—C14—H14B110.3
C2—N2—C14116.7 (8)H14A—C14—H14B108.5
C2—N2—C7120.7 (9)C20—C15—C16118.0 (9)
C14—N2—C7117.0 (8)C20—C15—P1121.5 (7)
Pt1—C1—H1A109.5C16—C15—P1120.3 (8)
Pt1—C1—H1B109.5C15—C16—C17120.2 (11)
H1A—C1—H1B109.5C15—C16—H16119.9
Pt1—C1—H1C109.5C17—C16—H16119.9
H1A—C1—H1C109.5C18—C17—C16120.8 (11)
H1B—C1—H1C109.5C18—C17—H17119.6
N1—C2—C3121.4 (9)C16—C17—H17119.6
N1—C2—N2117.4 (9)C17—C18—C19119.3 (11)
C3—C2—N2121.3 (9)C17—C18—H18120.4
C4—C3—C2119.3 (10)C19—C18—H18120.4
C4—C3—H3120.3C18—C19—C20119.3 (11)
C2—C3—H3120.3C18—C19—H19120.3
C3—C4—C5118.5 (11)C20—C19—H19120.3
C3—C4—H4120.8C15—C20—C19122.4 (10)
C5—C4—H4120.8C15—C20—H20118.8
C6—C5—C4118.9 (10)C19—C20—H20118.8
C6—C5—H5120.6C22—C21—C26118.4 (11)
C4—C5—H5120.6C22—C21—P1122.4 (9)
N1—C6—C5123.2 (10)C26—C21—P1119.2 (9)
N1—C6—H6118.4C21—C22—C23120.5 (15)
C5—C6—H6118.4C21—C22—H22119.7
N2—C7—C8114.6 (9)C23—C22—H22119.7
N2—C7—H7A108.6C24—C23—C22121.8 (18)
C8—C7—H7A108.6C24—C23—H23119.1
N2—C7—H7B108.6C22—C23—H23119.1
C8—C7—H7B108.6C23—C24—C25118.1 (16)
H7A—C7—H7B107.6C23—C24—H24120.9
C9—C8—C13117.5 (12)C25—C24—H24120.9
C9—C8—C7123.8 (10)C24—C25—C26121.7 (16)
C13—C8—C7118.6 (11)C24—C25—H25119.2
C10—C9—C8119.0 (13)C26—C25—H25119.2
C10—C9—H9120.5C21—C26—C25119.2 (14)
C8—C9—H9120.5C21—C26—H26120.4
C11—C10—C9122.9 (16)C25—C26—H26120.4
C11—C10—H10118.6
C1—Pt1—P1—C15−69.7 (5)C10—C11—C12—C134(2)
N1—Pt1—P1—C15110.5 (4)C11—C12—C13—C8−4(2)
Cl1—Pt1—P1—C15−57 (2)C9—C8—C13—C121.5 (16)
C1—Pt1—P1—C2159.9 (5)C7—C8—C13—C12−175.0 (11)
N1—Pt1—P1—C21−119.9 (4)C2—N2—C14—P1−90.2 (9)
Cl1—Pt1—P1—C2173 (2)C7—N2—C14—P1115.7 (8)
C1—Pt1—P1—C14176.3 (5)C15—P1—C14—N2−72.7 (7)
N1—Pt1—P1—C14−3.5 (4)C21—P1—C14—N2177.1 (6)
Cl1—Pt1—P1—C14−171 (2)Pt1—P1—C14—N252.5 (7)
C1—Pt1—N1—C6−22 (5)C21—P1—C15—C20−125.7 (9)
P1—Pt1—N1—C6154.9 (7)C14—P1—C15—C20125.0 (9)
Cl1—Pt1—N1—C6−25.8 (7)Pt1—P1—C15—C208.8 (10)
C1—Pt1—N1—C2148 (5)C21—P1—C15—C1658.9 (9)
P1—Pt1—N1—C2−35.2 (8)C14—P1—C15—C16−50.5 (9)
Cl1—Pt1—N1—C2144.2 (8)Pt1—P1—C15—C16−166.7 (7)
C6—N1—C2—C310.0 (15)C20—C15—C16—C17−1.0 (16)
Pt1—N1—C2—C3−159.9 (8)P1—C15—C16—C17174.6 (10)
C6—N1—C2—N2−169.3 (9)C15—C16—C17—C181(2)
Pt1—N1—C2—N220.8 (13)C16—C17—C18—C19−1(2)
C14—N2—C2—N147.3 (12)C17—C18—C19—C201.2 (18)
C7—N2—C2—N1−159.6 (10)C16—C15—C20—C191.6 (16)
C14—N2—C2—C3−132.0 (10)P1—C15—C20—C19−174.0 (9)
C7—N2—C2—C321.1 (15)C18—C19—C20—C15−1.7 (18)
N1—C2—C3—C4−6.0 (16)C15—P1—C21—C2221.9 (11)
N2—C2—C3—C4173.3 (10)C14—P1—C21—C22129.3 (10)
C2—C3—C4—C5−1.3 (17)Pt1—P1—C21—C22−113.6 (9)
C3—C4—C5—C64.3 (18)C15—P1—C21—C26−161.4 (8)
C2—N1—C6—C5−7.0 (15)C14—P1—C21—C26−54.0 (9)
Pt1—N1—C6—C5163.6 (8)Pt1—P1—C21—C2663.1 (9)
C4—C5—C6—N1−0.2 (17)C26—C21—C22—C231.6 (19)
C2—N2—C7—C861.9 (13)P1—C21—C22—C23178.3 (11)
C14—N2—C7—C8−145.1 (9)C21—C22—C23—C243(2)
N2—C7—C8—C920.8 (15)C22—C23—C24—C25−4(3)
N2—C7—C8—C13−162.9 (9)C23—C24—C25—C260(2)
C13—C8—C9—C100.5 (16)C22—C21—C26—C25−5.1 (16)
C7—C8—C9—C10176.7 (11)P1—C21—C26—C25178.1 (9)
C8—C9—C10—C110(2)C24—C25—C26—C214(2)
C9—C10—C11—C12−2(2)
Cg1 is the centroid of the C15–C20 benzene ring.
D—H···AD—HH···AD···AD—H···A
C23—H23···Cg1i0.933.104.001 (2)154
C7—H7B···Cl1ii0.972.723.392 (2)127
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C15–C20 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C23—H23⋯Cg1i0.933.104.001 (2)154
C7—H7B⋯Cl1ii0.972.723.392 (2)127

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,6-Bis(diphenylphosphino)pyridine-bridged hetero-polynuclear complexes consolidated by Fe-->M (M = Ag, Hg) dative bonding.

Authors:  H B Song; Z Z Zhang; T C Mak
Journal:  Inorg Chem       Date:  2001-11-05       Impact factor: 5.165

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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