Literature DB >> 21522470

5,11,17,23-Tetra-kis(chloro-meth-yl)-25,26,27,28-tetra-propoxycalix[4]arene.

Felix Kutter, Matthias H Düker, Matthias Zeller, Vladimir A Azov.   

Abstract

The title calix[4]arene, C(44)H(52)Cl(4)O(4), displays the 1,3-alternate conformation with crystallographically imposed twofold symmetry. Four phenolic rings of the calixarene backbone are tilted into the calix cavity, making dihedral angles of 77.42 (2) and 77.71 (2)° with the plane of the four bridging methyl-ene C atoms. Pairs of opposite aromatic rings make dihedral angles of 25.16 (3) and 24.58 (4)° with each other. In the crystal, the calixarene mol-ecules pack with the formation of infinite columns along the b axis. The crystal packing shows a network of C-H⋯Cl contacts, which can be considered as non-classical hydrogen bonds.

Entities:  

Year:  2011        PMID: 21522470      PMCID: PMC3052014          DOI: 10.1107/S160053681100660X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For calixarene derivatives and their applications, see: Gutsche (2008 ▶); Ikeda & Shinkai (1997 ▶). For the use of calixarenes in crystal engineering, see: Dalgrano et al. (2007 ▶). For the previous synthesis of the title compound, see: Ikeda & Shinkai (1994a ▶). For its application in the formation of nanotubes, see: Ikeda & Shinkai (1994b ▶). For reviews on weak non-classical hydrogen bonding, see: Desiraju & Steiner (1999 ▶); Steiner (2002 ▶); Desiraju (2005 ▶).

Experimental

Crystal data

C44H52Cl4O4 M = 786.66 Monoclinic, a = 23.104 (3) Å b = 11.5871 (15) Å c = 17.618 (2) Å β = 117.655 (2)° V = 4177.7 (9) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 100 K 0.49 × 0.31 × 0.15 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.658, T max = 0.746 15796 measured reflections 6176 independent reflections 5280 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.119 S = 0.97 6176 reflections 235 parameters H-atom parameters constrained Δρmax = 0.84 e Å−3 Δρmin = −1.05 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: CRYSTALS, enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681100660X/rk2266sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681100660X/rk2266Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C44H52Cl4O4F(000) = 1664
Mr = 786.66Dx = 1.251 Mg m3
Monoclinic, C2/cMelting point = 562–565 K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 23.104 (3) ÅCell parameters from 6719 reflections
b = 11.5871 (15) Åθ = 2.6–31.2°
c = 17.618 (2) ŵ = 0.32 mm1
β = 117.655 (2)°T = 100 K
V = 4177.7 (9) Å3Plate, colourless
Z = 40.49 × 0.31 × 0.15 mm
Bruker Kappa APEXII CCD diffractometer6176 independent reflections
Radiation source: fine–focus sealed tube5280 reflections with I > 2σ(I)
graphiteRint = 0.019
ω scansθmax = 31.3°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −32→21
Tmin = 0.658, Tmax = 0.746k = −16→16
15796 measured reflectionsl = −25→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.119 Method: Modified Sheldrick w = 1/[σ2(F2) + (0.06P)2 + 6.5P], where P = (max(Fo2,0) + 2Fc2)/3
S = 0.97(Δ/σ)max = 0.001
6176 reflectionsΔρmax = 0.84 e Å3
235 parametersΔρmin = −1.05 e Å3
0 restraints
xyzUiso*/Ueq
C10.50019 (6)0.26912 (11)0.95475 (8)0.0164
C20.54654 (6)0.20061 (11)0.93269 (8)0.0149
C30.53732 (6)0.08279 (11)0.91462 (8)0.0167
C40.57355 (6)0.02376 (11)0.88215 (8)0.0170
C50.61874 (6)0.08366 (11)0.86547 (8)0.0168
C60.62966 (6)0.20102 (11)0.88333 (8)0.0148
C70.67218 (6)0.27004 (11)0.85493 (8)0.0163
C80.62887 (6)0.33794 (11)0.77464 (8)0.0143
C90.61781 (6)0.45548 (11)0.77855 (8)0.0160
C100.57288 (6)0.51528 (11)0.70662 (8)0.0164
C110.53667 (6)0.45584 (11)0.63009 (8)0.0159
C120.54589 (6)0.33795 (11)0.62379 (8)0.0144
C130.59403 (6)0.28149 (10)0.69587 (8)0.0137
C140.59478 (6)0.25714 (10)0.91977 (8)0.0145
C150.55982 (8)−0.10064 (12)0.85763 (10)0.0239
C160.56055 (8)0.64034 (12)0.71362 (10)0.0231
O170.60538 (4)0.37378 (8)0.93772 (6)0.0152
C180.65446 (7)0.39656 (12)1.02414 (8)0.0203
C190.66500 (8)0.52464 (13)1.03584 (10)0.0267
C200.71259 (8)0.55535 (15)1.12794 (11)0.0327
O210.60378 (5)0.16480 (8)0.69063 (6)0.0160
C220.65246 (7)0.13892 (11)0.66358 (9)0.0186
C230.64766 (7)0.01154 (13)0.64361 (10)0.0246
C240.69974 (8)−0.02954 (15)0.61997 (11)0.0314
Cl250.61811 (3)−0.19788 (3)0.93509 (3)0.0381
Cl260.62004 (3)0.73262 (3)0.70485 (3)0.0407
H110.52430.32121.00250.0157*
H120.47470.21620.97280.0143*
H310.50420.04380.92350.0150*
H510.64140.04270.83930.0158*
H720.70200.32100.90140.0138*
H710.69880.21630.84110.0144*
H910.64060.49330.83050.0136*
H1110.50480.49660.58300.0128*
H1510.5183−0.12180.85220.0232*
H1520.5596−0.11370.80380.0233*
H1620.56420.65360.76930.0219*
H1610.51930.66460.66850.0223*
H1810.69470.35561.03350.0207*
H1820.64130.36801.06560.0205*
H1920.68300.55310.99850.0289*
H1910.62220.56281.02060.0279*
H2010.72300.63661.13180.0433*
H2030.75320.51231.14730.0441*
H2020.69350.53701.16520.0450*
H2210.69560.15950.70820.0178*
H2220.64200.18150.61150.0173*
H2310.6530−0.02870.69450.0258*
H2320.6051−0.00450.59710.0253*
H2420.6953−0.11090.60680.0429*
H2410.7421−0.01160.66480.0429*
H2430.69570.01250.57020.0441*
U11U22U33U12U13U23
C10.0182 (6)0.0177 (5)0.0144 (5)0.0010 (4)0.0086 (5)0.0009 (4)
C20.0162 (6)0.0154 (5)0.0129 (5)0.0013 (4)0.0066 (5)0.0018 (4)
C30.0173 (6)0.0153 (5)0.0169 (6)−0.0003 (4)0.0076 (5)0.0026 (4)
C40.0192 (6)0.0138 (5)0.0165 (5)0.0009 (4)0.0070 (5)0.0011 (4)
C50.0185 (6)0.0150 (5)0.0169 (6)0.0029 (4)0.0084 (5)0.0017 (4)
C60.0135 (5)0.0160 (5)0.0134 (5)0.0012 (4)0.0051 (4)0.0027 (4)
C70.0144 (5)0.0181 (5)0.0160 (5)0.0007 (4)0.0066 (5)0.0021 (4)
C80.0133 (5)0.0147 (5)0.0167 (5)−0.0002 (4)0.0085 (5)0.0012 (4)
C90.0172 (6)0.0152 (5)0.0170 (6)−0.0020 (4)0.0092 (5)−0.0009 (4)
C100.0194 (6)0.0130 (5)0.0200 (6)−0.0006 (4)0.0119 (5)0.0006 (4)
C110.0166 (6)0.0147 (5)0.0172 (6)0.0008 (4)0.0086 (5)0.0026 (4)
C120.0160 (6)0.0151 (5)0.0147 (5)−0.0010 (4)0.0092 (5)0.0003 (4)
C130.0148 (5)0.0125 (5)0.0167 (5)−0.0002 (4)0.0098 (5)0.0008 (4)
C140.0155 (6)0.0131 (5)0.0128 (5)0.0004 (4)0.0047 (4)0.0012 (4)
C150.0292 (7)0.0166 (6)0.0248 (7)−0.0011 (5)0.0117 (6)−0.0009 (5)
C160.0308 (7)0.0146 (6)0.0267 (7)0.0017 (5)0.0156 (6)0.0007 (5)
O170.0169 (4)0.0129 (4)0.0131 (4)−0.0005 (3)0.0046 (3)0.0000 (3)
C180.0218 (6)0.0190 (6)0.0142 (6)0.0007 (5)0.0035 (5)−0.0003 (4)
C190.0296 (8)0.0202 (6)0.0237 (7)−0.0023 (5)0.0068 (6)−0.0047 (5)
C200.0261 (8)0.0328 (8)0.0306 (8)−0.0005 (6)0.0059 (6)−0.0149 (6)
O210.0188 (4)0.0126 (4)0.0208 (4)0.0013 (3)0.0127 (4)−0.0002 (3)
C220.0197 (6)0.0185 (6)0.0220 (6)0.0025 (5)0.0134 (5)−0.0003 (5)
C230.0223 (7)0.0215 (6)0.0300 (7)0.0024 (5)0.0122 (6)−0.0073 (5)
C240.0253 (7)0.0352 (8)0.0327 (8)0.0104 (6)0.0126 (6)−0.0073 (6)
Cl250.0615 (3)0.01859 (16)0.02742 (19)0.01114 (16)0.01501 (19)0.00475 (13)
Cl260.0690 (3)0.02000 (17)0.0518 (3)−0.01600 (18)0.0438 (3)−0.00762 (16)
C1—C12i1.5220 (17)C14—O171.3837 (15)
C1—C21.5214 (18)C15—Cl251.7998 (15)
C1—H110.973C15—H1510.950
C1—H120.998C15—H1520.958
C2—C31.3956 (17)C16—Cl261.8037 (15)
C2—C141.3994 (17)C16—H1620.958
C3—C41.3927 (18)C16—H1610.957
C3—H310.962O17—C181.4392 (15)
C4—C51.3940 (18)C18—C191.503 (2)
C4—C151.4959 (19)C18—H1810.988
C5—C61.3922 (17)C18—H1820.970
C5—H510.967C19—C201.521 (2)
C6—C71.5203 (18)C19—H1920.984
C6—C141.4018 (18)C19—H1911.000
C7—C81.5190 (17)C20—H2010.967
C7—H720.985C20—H2030.974
C7—H710.982C20—H2020.969
C8—C91.3933 (17)O21—C221.4420 (16)
C8—C131.4016 (17)C22—C231.5094 (19)
C9—C101.3938 (18)C22—H2210.971
C9—H910.927C22—H2220.969
C10—C111.3946 (18)C23—C241.521 (2)
C10—C161.4929 (18)C23—H2310.966
C11—C121.3950 (17)C23—H2320.961
C11—H1110.941C24—H2420.965
C12—C131.4024 (17)C24—H2410.952
C13—O211.3810 (14)C24—H2430.968
C12i—C1—C2108.63 (10)C4—C15—H151110.3
C12i—C1—H11109.8Cl25—C15—H151106.3
C2—C1—H11110.8C4—C15—H152109.9
C12i—C1—H12110.2Cl25—C15—H152108.1
C2—C1—H12110.4H151—C15—H152108.5
H11—C1—H12107.0C10—C16—Cl26112.72 (10)
C1—C2—C3121.19 (11)C10—C16—H162108.1
C1—C2—C14120.36 (11)Cl26—C16—H162106.6
C3—C2—C14118.00 (12)C10—C16—H161111.8
C2—C3—C4121.13 (12)Cl26—C16—H161105.1
C2—C3—H31118.1H162—C16—H161112.5
C4—C3—H31120.7C14—O17—C18112.95 (9)
C3—C4—C5119.59 (12)O17—C18—C19108.92 (11)
C3—C4—C15120.30 (12)O17—C18—H181107.9
C5—C4—C15119.87 (12)C19—C18—H181111.8
C4—C5—C6120.90 (12)O17—C18—H182111.4
C4—C5—H51118.7C19—C18—H182108.7
C6—C5—H51120.3H181—C18—H182108.1
C5—C6—C7121.09 (12)C18—C19—C20111.62 (13)
C5—C6—C14118.31 (12)C18—C19—H192109.3
C7—C6—C14120.23 (11)C20—C19—H192108.3
C6—C7—C8109.38 (10)C18—C19—H191108.8
C6—C7—H72110.6C20—C19—H191108.6
C8—C7—H72111.6H192—C19—H191110.1
C6—C7—H71108.8C19—C20—H201109.7
C8—C7—H71108.4C19—C20—H203110.9
H72—C7—H71108.0H201—C20—H203107.8
C7—C8—C9121.12 (11)C19—C20—H202109.9
C7—C8—C13120.51 (11)H201—C20—H202110.0
C9—C8—C13118.09 (11)H203—C20—H202108.5
C8—C9—C10121.15 (12)C13—O21—C22113.71 (10)
C8—C9—H91118.5O21—C22—C23107.23 (11)
C10—C9—H91120.3O21—C22—H221110.3
C9—C10—C11119.54 (11)C23—C22—H221111.5
C9—C10—C16119.84 (12)O21—C22—H222108.5
C11—C10—C16120.49 (12)C23—C22—H222108.5
C10—C11—C12121.02 (12)H221—C22—H222110.7
C10—C11—H111118.6C22—C23—C24112.83 (13)
C12—C11—H111120.4C22—C23—H231106.9
C1i—C12—C11121.15 (11)C24—C23—H231109.0
C1i—C12—C13120.33 (11)C22—C23—H232108.9
C11—C12—C13118.09 (11)C24—C23—H232109.3
C12—C13—C8121.91 (11)H231—C23—H232109.8
C12—C13—O21118.79 (11)C23—C24—H242111.2
C8—C13—O21119.11 (11)C23—C24—H241110.1
C6—C14—C2121.86 (11)H242—C24—H241111.5
C6—C14—O17118.64 (11)C23—C24—H243109.5
C2—C14—O17119.34 (11)H242—C24—H243108.6
C4—C15—Cl25113.61 (10)H241—C24—H243105.7
D—H···AD—HH···AD···AD—H···A
C22—H222···Cl25ii0.972.903.786 (1)153
C23—H231···Cl26iii0.972.903.557 (2)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C22—H222⋯Cl25i0.972.903.786 (1)153
C23—H231⋯Cl26ii0.972.903.557 (2)127

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Novel Cavity Design Using Calix[n]arene Skeletons: Toward Molecular Recognition and Metal Binding.

Authors:  Atsushi Ikeda; Seiji Shinkai
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

2.  The hydrogen bond in the solid state.

Authors:  Thomas Steiner
Journal:  Angew Chem Int Ed Engl       Date:  2002-01-04       Impact factor: 15.336

3.  Engineering void space in organic van der Waals crystals: calixarenes lead the way.

Authors:  Scott J Dalgarno; Praveen K Thallapally; Leonard J Barbour; Jerry L Atwood
Journal:  Chem Soc Rev       Date:  2007-01-02       Impact factor: 54.564

Review 4.  C-H...O and other weak hydrogen bonds. From crystal engineering to virtual screening.

Authors:  Gautam R Desiraju
Journal:  Chem Commun (Camb)       Date:  2005-05-27       Impact factor: 6.222

  4 in total

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