Literature DB >> 21522448

2-Aza-niumylcarba-closo-dodeca-borate ethanol monosolvate.

Alexander Himmelspach1, Guido J Reiss, Maik Finze.   

Abstract

Two formula units of the title compound, 2-H(3)N-closo-1-CB(11)H(11)·CH(3)CH(2)OH or CH(14)B(11)N·C(2)H(5)OH, form a ring motif of R(4) (2)(8) type in the solid state that surrounds a crystallographic center of symmetry. The ring motif is a result of N-H⋯O hydrogen bonds. In contrast to many structures of {closo-1-CB(11)} clusters, the assignment of the position of the cluster C atom in the structure of the title compound is unambigious. The relatively long B-N bond length [1.5396 (10) Å] documents the absence of any B-N π-inter-action in the title compound although this was observed for a related 2-amino-carba-closo-dodeca-borate.

Entities:  

Year:  2011        PMID: 21522448      PMCID: PMC3051930          DOI: 10.1107/S1600536811006222

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a general overview on monocarba-closo-dodeca­borates, see: Körbe et al. (2006 ▶). For the synthesis and properties of 2-amino- and 2-azaniumyl­carba-closo-dodeca­boron clusters, see: Finze (2009 ▶). For structures and properties of related {closo-1-CB11} clusters with NH2 and NH3 groups, see: Jelínek et al. (1986 ▶); Finze (2007 ▶); Finze et al. (2007 ▶); Finze & Sprenger (2010 ▶). For hydrogen-bond motifs, see: Etter (1990 ▶).

Experimental

Crystal data

CH14B11N·C2H6O M = 205.11 Monoclinic, a = 9.5753 (2) Å b = 9.2549 (2) Å c = 13.9095 (5) Å β = 97.519 (3)° V = 1222.04 (6) Å3 Z = 4 Mo Kα radiation μ = 0.06 mm−1 T = 120 K 0.28 × 0.26 × 0.20 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.729, T max = 1.000 61096 measured reflections 3561 independent reflections 3199 reflections with I > 2σ(I) R int = 0.030 3 standard reflections every 60 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.069 S = 1.02 3561 reflections 208 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2011) ▶; software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811006222/br2161sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811006222/br2161Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
CH14B11N·C2H6OF(000) = 432
Mr = 205.11Dx = 1.115 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 48838 reflections
a = 9.5753 (2) Åθ = 3.0–35.4°
b = 9.2549 (2) ŵ = 0.06 mm1
c = 13.9095 (5) ÅT = 120 K
β = 97.519 (3)°Block, colourless
V = 1222.04 (6) Å30.28 × 0.26 × 0.20 mm
Z = 4
Oxford Diffraction Xcalibur Eos diffractometer3199 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
graphiteθmax = 30.0°, θmin = 4.3°
ω scansh = −13→13
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −13→13
Tmin = 0.729, Tmax = 1.000l = −19→19
61096 measured reflections3 standard reflections every 60 min
3561 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: difference Fourier map
wR(F2) = 0.069H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + 0.6P] where P = (Fo2 + 2Fc2)/3
3561 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.33.52 (release 06–11-2009). Numerical absorption correction based on Gaussian integration over a multifaceted crystal model..
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.64079 (8)0.84830 (8)0.78113 (5)0.01344 (14)
H10.5827 (11)0.9122 (12)0.8122 (7)0.018 (3)*
B20.80596 (8)0.81753 (9)0.83584 (6)0.01164 (14)
N10.85434 (7)0.89268 (8)0.93327 (5)0.01414 (13)
H1A0.9385 (13)0.8604 (13)0.9609 (8)0.027 (3)*
H1B0.8607 (12)0.9893 (14)0.9280 (8)0.026 (3)*
H1C0.7976 (12)0.8764 (13)0.9748 (8)0.024 (3)*
B30.67585 (9)0.68137 (9)0.83322 (6)0.01329 (15)
H30.6339 (11)0.6570 (11)0.8994 (7)0.018 (3)*
B40.56348 (9)0.70103 (10)0.72203 (6)0.01463 (16)
H40.4514 (11)0.6832 (12)0.7204 (8)0.022 (3)*
B50.62540 (9)0.85015 (9)0.65759 (6)0.01452 (16)
H50.5509 (11)0.9214 (12)0.6171 (7)0.019 (3)*
B60.77708 (9)0.92320 (9)0.72901 (6)0.01289 (15)
H60.7950 (11)1.0393 (11)0.7353 (7)0.019 (3)*
B70.84826 (8)0.63822 (9)0.80794 (6)0.01176 (14)
H70.9196 (11)0.5751 (12)0.8583 (7)0.019 (3)*
B80.69640 (9)0.56516 (9)0.73553 (6)0.01280 (15)
H80.6694 (11)0.4511 (12)0.7382 (7)0.020 (3)*
B90.66519 (9)0.66986 (9)0.62665 (6)0.01348 (15)
H90.6180 (11)0.6216 (12)0.5578 (7)0.019 (3)*
B100.79711 (9)0.80728 (9)0.63111 (6)0.01288 (15)
H100.8360 (11)0.8478 (11)0.5659 (7)0.018 (3)*
B110.91068 (8)0.78779 (9)0.74285 (6)0.01167 (15)
H111.0217 (11)0.8179 (11)0.7508 (8)0.019 (3)*
B120.84085 (8)0.63102 (9)0.67959 (6)0.01164 (14)
H120.9092 (11)0.5566 (11)0.6440 (7)0.017 (2)*
O10.88753 (6)1.20322 (7)0.94495 (5)0.01863 (12)
H1O0.9206 (15)1.2323 (16)0.9014 (10)0.045 (4)*
C20.78862 (9)1.30879 (9)0.97377 (6)0.02120 (17)
H2A0.72491.34010.91760.035 (2)*
H2B0.83901.39261.00210.035 (2)*
C30.70730 (10)1.23985 (10)1.04632 (7)0.02545 (19)
H3A0.77131.20701.10080.043 (2)*
H3B0.65501.15921.01700.043 (2)*
H3C0.64351.30921.06770.043 (2)*
U11U22U33U12U13U23
C10.0119 (3)0.0125 (3)0.0161 (3)0.0009 (3)0.0025 (3)−0.0011 (3)
B20.0120 (3)0.0121 (3)0.0109 (3)−0.0006 (3)0.0020 (3)−0.0010 (3)
N10.0162 (3)0.0148 (3)0.0116 (3)−0.0014 (2)0.0026 (2)−0.0018 (2)
B30.0134 (3)0.0129 (4)0.0140 (3)−0.0008 (3)0.0036 (3)−0.0005 (3)
B40.0116 (3)0.0141 (4)0.0181 (4)−0.0007 (3)0.0016 (3)−0.0019 (3)
B50.0141 (4)0.0135 (4)0.0153 (4)0.0017 (3)−0.0007 (3)−0.0001 (3)
B60.0140 (3)0.0113 (3)0.0134 (3)−0.0001 (3)0.0021 (3)0.0003 (3)
B70.0123 (3)0.0114 (3)0.0118 (3)0.0001 (3)0.0022 (3)0.0007 (3)
B80.0130 (3)0.0117 (3)0.0139 (3)−0.0011 (3)0.0026 (3)−0.0005 (3)
B90.0139 (3)0.0128 (4)0.0133 (3)0.0002 (3)0.0002 (3)−0.0010 (3)
B100.0151 (4)0.0119 (3)0.0116 (3)0.0003 (3)0.0016 (3)0.0005 (3)
B110.0118 (3)0.0117 (3)0.0117 (3)−0.0005 (3)0.0024 (3)0.0000 (3)
B120.0124 (3)0.0111 (3)0.0115 (3)0.0004 (3)0.0022 (3)0.0000 (3)
O10.0193 (3)0.0187 (3)0.0190 (3)0.0011 (2)0.0069 (2)0.0008 (2)
C20.0232 (4)0.0159 (4)0.0251 (4)0.0040 (3)0.0055 (3)0.0024 (3)
C30.0242 (4)0.0254 (4)0.0286 (4)0.0045 (3)0.0108 (3)0.0023 (4)
C1—B21.6872 (11)B5—B61.7821 (12)
C1—B31.7207 (12)B5—H51.075 (10)
C1—B41.7094 (12)B6—B101.7636 (12)
C1—B51.7055 (12)B6—B111.7832 (12)
C1—B61.7196 (11)B6—H61.090 (11)
C1—H10.953 (10)B7—B121.7787 (11)
B2—N11.5396 (10)B7—B81.7896 (12)
B2—B111.7589 (11)B7—B111.7985 (12)
B2—B71.7634 (12)B7—H71.083 (10)
B2—B31.7691 (12)B8—B121.7809 (12)
B2—B61.7702 (12)B8—B91.7898 (12)
N1—H1A0.898 (12)B8—H81.088 (11)
N1—H1B0.900 (12)B9—B121.7822 (12)
N1—H1C0.857 (12)B9—B101.7878 (12)
B3—B81.7641 (12)B9—H91.099 (10)
B3—B41.7742 (12)B10—B111.7856 (12)
B3—B71.7777 (12)B10—B121.7937 (12)
B3—H31.075 (10)B10—H101.091 (10)
B4—B91.7692 (12)B11—B121.7811 (12)
B4—B81.7816 (12)B11—H111.091 (10)
B4—B51.7885 (13)B12—H121.110 (10)
B4—H41.083 (11)O1—C21.4532 (10)
B5—B101.7761 (12)O1—H1O0.768 (15)
B5—B91.7770 (12)C2—C31.4958 (12)
B2—C1—B5114.11 (6)B11—B6—H6125.5 (6)
B2—C1—B4113.81 (6)B5—B6—H6121.8 (5)
B5—C1—B463.16 (5)B2—B7—B359.94 (5)
B2—C1—B662.60 (5)B2—B7—B12106.02 (6)
B5—C1—B662.71 (5)B3—B7—B12106.91 (6)
B4—C1—B6115.05 (6)B2—B7—B8106.64 (6)
B2—C1—B362.53 (5)B3—B7—B859.27 (5)
B5—C1—B3114.82 (6)B12—B7—B859.88 (5)
B4—C1—B362.29 (5)B2—B7—B1159.17 (4)
B6—C1—B3114.99 (6)B3—B7—B11107.76 (6)
B2—C1—H1117.9 (6)B12—B7—B1159.72 (5)
B5—C1—H1118.2 (6)B8—B7—B11107.85 (6)
B4—C1—H1118.1 (6)B2—B7—H7120.6 (6)
B6—C1—H1117.5 (6)B3—B7—H7121.1 (5)
B3—C1—H1117.3 (6)B12—B7—H7124.6 (5)
N1—B2—C1118.49 (6)B8—B7—H7123.9 (6)
N1—B2—B11125.67 (6)B11—B7—H7121.2 (6)
C1—B2—B11106.60 (6)B3—B8—B12107.41 (6)
N1—B2—B7124.58 (6)B3—B8—B460.05 (5)
C1—B2—B7106.76 (6)B12—B8—B4107.30 (6)
B11—B2—B761.41 (5)B3—B8—B9107.38 (6)
N1—B2—B3118.02 (6)B12—B8—B959.88 (5)
C1—B2—B359.66 (5)B4—B8—B959.39 (5)
B11—B2—B3109.94 (6)B3—B8—B760.03 (5)
B7—B2—B360.43 (5)B12—B8—B759.76 (5)
N1—B2—B6119.03 (6)B4—B8—B7108.02 (6)
C1—B2—B659.59 (5)B9—B8—B7107.76 (6)
B11—B2—B660.70 (5)B3—B8—H8120.9 (5)
B7—B2—B6110.51 (6)B12—B8—H8123.2 (5)
B3—B2—B6110.12 (6)B4—B8—H8121.2 (6)
B2—N1—H1A112.1 (7)B9—B8—H8122.7 (6)
B2—N1—H1B113.1 (7)B7—B8—H8121.8 (6)
H1A—N1—H1B107.4 (10)B4—B9—B560.58 (5)
B2—N1—H1C111.7 (8)B4—B9—B12107.78 (6)
H1A—N1—H1C105.5 (10)B5—B9—B12108.06 (6)
H1B—N1—H1C106.6 (10)B4—B9—B10108.28 (6)
C1—B3—B8104.97 (6)B5—B9—B1059.77 (5)
C1—B3—B257.81 (5)B12—B9—B1060.32 (5)
B8—B3—B2107.51 (6)B4—B9—B860.07 (5)
C1—B3—B458.54 (5)B5—B9—B8108.71 (6)
B8—B3—B460.47 (5)B12—B9—B859.81 (5)
B2—B3—B4106.86 (6)B10—B9—B8108.47 (6)
C1—B3—B7104.68 (6)B4—B9—H9121.0 (5)
B8—B3—B760.70 (5)B5—B9—H9121.0 (6)
B2—B3—B759.63 (5)B12—B9—H9122.5 (5)
B4—B3—B7108.88 (6)B10—B9—H9121.8 (5)
C1—B3—H3118.3 (6)B8—B9—H9121.4 (6)
B8—B3—H3128.6 (6)B6—B10—B560.46 (5)
B2—B3—H3118.2 (6)B6—B10—B1160.32 (5)
B4—B3—H3121.0 (5)B5—B10—B11108.48 (6)
B7—B3—H3125.7 (5)B6—B10—B9108.17 (6)
C1—B4—B9104.15 (6)B5—B10—B959.81 (5)
C1—B4—B359.17 (5)B11—B10—B9107.78 (6)
B9—B4—B3107.84 (6)B6—B10—B12107.86 (6)
C1—B4—B8104.69 (6)B5—B10—B12107.59 (6)
B9—B4—B860.54 (5)B11—B10—B1259.68 (5)
B3—B4—B859.49 (5)B9—B10—B1259.69 (5)
C1—B4—B558.31 (5)B6—B10—H10121.1 (6)
B9—B4—B559.93 (5)B5—B10—H10121.5 (5)
B3—B4—B5108.24 (6)B11—B10—H10121.5 (5)
B8—B4—B5108.57 (6)B9—B10—H10122.2 (6)
C1—B4—H4119.8 (6)B12—B10—H10122.4 (6)
B9—B4—H4126.9 (6)B2—B11—B12106.11 (6)
B3—B4—H4119.3 (6)B2—B11—B659.96 (5)
B8—B4—H4125.9 (6)B12—B11—B6107.55 (6)
B5—B4—H4120.0 (6)B2—B11—B10106.46 (6)
C1—B5—B10104.26 (6)B12—B11—B1060.38 (5)
C1—B5—B9103.98 (6)B6—B11—B1059.23 (5)
B10—B5—B960.42 (5)B2—B11—B759.42 (5)
C1—B5—B659.03 (5)B12—B11—B759.59 (4)
B10—B5—B659.42 (5)B6—B11—B7108.32 (6)
B9—B5—B6107.84 (6)B10—B11—B7108.14 (6)
C1—B5—B458.52 (5)B2—B11—H11121.8 (6)
B10—B5—B4107.94 (6)B12—B11—H11123.8 (6)
B9—B5—B459.50 (5)B6—B11—H11120.5 (6)
B6—B5—B4108.23 (6)B10—B11—H11122.5 (6)
C1—B5—H5119.9 (6)B7—B11—H11122.0 (6)
B10—B5—H5126.7 (6)B7—B12—B860.37 (5)
B9—B5—H5126.7 (6)B7—B12—B1160.69 (5)
B6—B5—H5119.7 (6)B8—B12—B11109.01 (6)
B4—B5—H5119.7 (6)B7—B12—B9108.58 (6)
C1—B6—B10104.21 (6)B8—B12—B960.31 (5)
C1—B6—B257.80 (4)B11—B12—B9108.23 (6)
B10—B6—B2106.93 (6)B7—B12—B10108.66 (6)
C1—B6—B11104.15 (6)B8—B12—B10108.60 (6)
B10—B6—B1160.45 (5)B11—B12—B1059.93 (5)
B2—B6—B1159.34 (5)B9—B12—B1059.99 (5)
C1—B6—B558.26 (5)B7—B12—H12121.5 (5)
B10—B6—B560.12 (5)B8—B12—H12121.3 (5)
B2—B6—B5106.55 (6)B11—B12—H12121.4 (5)
B11—B6—B5108.32 (6)B9—B12—H12121.4 (5)
C1—B6—H6118.9 (5)B10—B12—H12121.3 (5)
B10—B6—H6129.1 (5)C2—O1—H1O109.4 (11)
B2—B6—H6118.1 (5)O1—C2—C3108.36 (7)
D—H···AD—HH···AD···AD—H···A
N1—H1B···O10.900 (12)2.006 (12)2.8937 (9)168.5 (10)
N1—H1A···O1i0.898 (12)2.065 (12)2.9446 (9)166.1 (10)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯O10.900 (12)2.006 (12)2.8937 (9)168.5 (10)
N1—H1A⋯O1i0.898 (12)2.065 (12)2.9446 (9)166.1 (10)

Symmetry code: (i) .

  5 in total

1.  Carbon extrusion/cluster contraction: synthesis of the fluorinated cyano-closo-undecaborate K2[3-NC-closo-B11F10].

Authors:  Maik Finze
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Chemistry of the carba-closo-dodecaborate(-) anion, CB(11)H(12)(-).

Authors:  Stefanie Körbe; Peter J Schreiber; Josef Michl
Journal:  Chem Rev       Date:  2006-12       Impact factor: 60.622

4.  Synthesis and characterization of 2-mono- and 1,2-diaminocarba-closo-dodecaborates M[1-R-2-H2N-closo-CB11H10] (R=H, Ph, H2N, CyHN).

Authors:  Maik Finze
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

5.  [1-H2N-CB11F11]---synthesis and reactions of a functionalized fluorinated carbadodecaborate anion.

Authors:  Maik Finze; Guido J Reiss; Manfred Zähres
Journal:  Inorg Chem       Date:  2007-10-19       Impact factor: 5.165

  5 in total

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