Literature DB >> 21522412

3,5,3'-Trihy-droxy-4'-meth-oxy-7-(3-methyl-but-2-en-yloxy)flavone.

Sheng-Hua Zhu, Shao-Qian Liu.   

Abstract

The title compound pteleifolosin C, C(21)H(20)O(7), was isolated from the petroleum ether-soluble fraction of an indigenous Chinese tree Melicope pteleifolia (Rutaceae). The dihedral angle between the benzene rings is 2.7 (2)°. Intra-molecular O-H⋯O hydrogen bonds occur. In the crystal, mol-ecules are linked by inter-molecular O-H-O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21522412      PMCID: PMC3052086          DOI: 10.1107/S1600536811005393

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the medicinal usage of M. pteleifolia in China, see: Chinese Pharmacopoeia (1977 ▶) and for folk use of M. pteleifolia in South East Asia, see: Gunawardana et al. (1987 ▶); Shaari et al. (2006 ▶). For related structures and background to pteleifolosin C, see: Smith et al. (2001 ▶); Sultana et al. (1999 ▶).

Experimental

Crystal data

C21H20O7 M = 384.37 Triclinic, a = 8.4073 (18) Å b = 9.0343 (19) Å c = 12.489 (3) Å α = 79.371 (2)° β = 83.519 (3)° γ = 78.806 (3)° V = 911.7 (3) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.60 × 0.50 × 0.45 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.939, T max = 0.954 8186 measured reflections 4103 independent reflections 3126 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.114 S = 0.98 4103 reflections 259 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005393/jh2258sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005393/jh2258Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H20O7Z = 2
Mr = 384.37F(000) = 404
Triclinic, P1Dx = 1.400 Mg m3
a = 8.4073 (18) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.0343 (19) ÅCell parameters from 3191 reflections
c = 12.489 (3) Åθ = 0.0–0.0°
α = 79.371 (2)°µ = 0.11 mm1
β = 83.519 (3)°T = 296 K
γ = 78.806 (3)°Block, colourless
V = 911.7 (3) Å30.60 × 0.50 × 0.45 mm
Bruker APEXII CCD diffractometer4103 independent reflections
Radiation source: fine-focus sealed tube3126 reflections with I > 2σ(I)
graphiteRint = 0.019
φ and ω scansθmax = 27.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.939, Tmax = 0.954k = −11→11
8186 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0437P)2 + 0.4019P] where P = (Fo2 + 2Fc2)/3
4103 reflections(Δ/σ)max = 0.001
259 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C50.0698 (2)0.01370 (19)0.72012 (14)0.0408 (4)
H5A0.1690−0.01150.67440.049*
H5B−0.01050.08100.67510.049*
C2−0.0595 (2)−0.21729 (19)0.72655 (15)0.0416 (4)
C40.0075 (2)−0.12862 (19)0.77422 (14)0.0428 (4)
H40.0170−0.15740.84900.051*
C3−0.1194 (3)−0.3565 (2)0.79063 (18)0.0584 (5)
H3A−0.0962−0.36840.86560.088*
H3B−0.0656−0.44540.76060.088*
H3C−0.2347−0.34450.78660.088*
C1−0.0815 (3)−0.1880 (2)0.60687 (17)0.0596 (5)
H1A−0.0403−0.09730.57290.089*
H1B−0.1951−0.17450.59620.089*
H1C−0.0234−0.27360.57470.089*
O10.10023 (15)0.08534 (13)0.80716 (9)0.0457 (3)
C90.30637 (18)0.47465 (17)0.75333 (12)0.0334 (3)
C70.18620 (19)0.29532 (17)0.67786 (13)0.0351 (3)
H70.15400.26390.61810.042*
C80.25584 (17)0.42543 (17)0.66575 (12)0.0308 (3)
C110.2147 (2)0.2601 (2)0.87334 (13)0.0433 (4)
H110.19900.20420.94290.052*
C60.16667 (19)0.21424 (18)0.78258 (13)0.0368 (4)
C100.2850 (2)0.38769 (19)0.85908 (13)0.0404 (4)
O20.3353 (2)0.43126 (16)0.94546 (10)0.0612 (4)
H20.37720.50740.92450.092*
C140.33864 (17)0.63647 (16)0.54058 (12)0.0296 (3)
C120.37894 (18)0.60914 (17)0.73464 (12)0.0337 (3)
C130.39232 (18)0.68726 (17)0.62346 (12)0.0327 (3)
O30.27254 (13)0.50474 (12)0.56215 (8)0.0341 (3)
O40.42931 (16)0.66001 (14)0.80866 (9)0.0477 (3)
C190.2782 (2)0.69577 (18)0.24055 (13)0.0383 (4)
H190.23810.64700.19270.046*
C150.33922 (17)0.70364 (17)0.42430 (12)0.0304 (3)
C180.33616 (19)0.83015 (18)0.20187 (12)0.0348 (3)
C160.39856 (19)0.83993 (17)0.38400 (12)0.0343 (3)
H160.43960.88880.43130.041*
C170.39621 (19)0.90123 (17)0.27506 (13)0.0348 (3)
C200.27958 (19)0.63340 (18)0.35041 (13)0.0356 (3)
H200.24000.54290.37550.043*
O70.34083 (16)0.90551 (14)0.09652 (9)0.0479 (3)
O60.45551 (17)1.03420 (14)0.23818 (10)0.0501 (3)
H60.43991.06310.17340.075*
C210.2862 (3)0.8369 (2)0.01710 (15)0.0635 (6)
H21A0.35240.73810.01410.095*
H21B0.29440.9006−0.05320.095*
H21C0.17490.82550.03670.095*
O50.46006 (16)0.81540 (14)0.60612 (9)0.0478 (3)
H50.48360.83110.66450.072*
U11U22U33U12U13U23
C50.0505 (9)0.0343 (9)0.0406 (9)−0.0176 (7)−0.0023 (7)−0.0040 (7)
C20.0397 (9)0.0351 (9)0.0512 (10)−0.0108 (7)0.0002 (7)−0.0085 (8)
C40.0513 (10)0.0358 (9)0.0427 (9)−0.0165 (7)−0.0038 (7)−0.0007 (7)
C30.0605 (12)0.0405 (11)0.0785 (14)−0.0238 (9)0.0020 (10)−0.0096 (10)
C10.0662 (13)0.0615 (13)0.0584 (12)−0.0201 (10)−0.0063 (10)−0.0191 (10)
O10.0668 (8)0.0371 (7)0.0382 (6)−0.0282 (6)−0.0063 (5)0.0019 (5)
C90.0385 (8)0.0312 (8)0.0319 (8)−0.0106 (6)−0.0025 (6)−0.0043 (6)
C70.0423 (8)0.0333 (8)0.0335 (8)−0.0147 (7)−0.0058 (6)−0.0048 (6)
C80.0346 (7)0.0284 (8)0.0297 (7)−0.0097 (6)−0.0020 (6)−0.0015 (6)
C110.0612 (11)0.0411 (10)0.0297 (8)−0.0210 (8)−0.0037 (7)0.0015 (7)
C60.0427 (9)0.0304 (8)0.0386 (9)−0.0149 (7)−0.0032 (7)−0.0006 (7)
C100.0543 (10)0.0397 (9)0.0311 (8)−0.0171 (8)−0.0049 (7)−0.0054 (7)
O20.1038 (11)0.0607 (9)0.0313 (6)−0.0451 (8)−0.0121 (7)−0.0029 (6)
C140.0325 (7)0.0243 (7)0.0332 (8)−0.0095 (6)−0.0021 (6)−0.0034 (6)
C120.0394 (8)0.0322 (8)0.0326 (8)−0.0116 (6)−0.0038 (6)−0.0070 (6)
C130.0376 (8)0.0279 (8)0.0350 (8)−0.0132 (6)−0.0029 (6)−0.0040 (6)
O30.0468 (6)0.0302 (6)0.0292 (5)−0.0178 (5)−0.0057 (4)−0.0016 (4)
O40.0714 (8)0.0457 (7)0.0350 (6)−0.0294 (6)−0.0104 (6)−0.0065 (5)
C190.0528 (10)0.0331 (8)0.0344 (8)−0.0169 (7)−0.0096 (7)−0.0060 (7)
C150.0322 (7)0.0280 (8)0.0316 (7)−0.0068 (6)−0.0032 (6)−0.0045 (6)
C180.0436 (8)0.0326 (8)0.0283 (8)−0.0092 (7)−0.0039 (6)−0.0025 (6)
C160.0432 (8)0.0319 (8)0.0320 (8)−0.0147 (6)−0.0046 (6)−0.0065 (6)
C170.0418 (8)0.0279 (8)0.0367 (8)−0.0137 (6)−0.0026 (6)−0.0031 (6)
C200.0451 (9)0.0290 (8)0.0357 (8)−0.0151 (7)−0.0054 (7)−0.0029 (6)
O70.0756 (9)0.0419 (7)0.0299 (6)−0.0223 (6)−0.0089 (6)0.0000 (5)
O60.0808 (9)0.0405 (7)0.0363 (6)−0.0356 (6)−0.0079 (6)0.0029 (5)
C210.1061 (17)0.0570 (13)0.0328 (9)−0.0242 (12)−0.0198 (10)−0.0021 (9)
O50.0753 (8)0.0424 (7)0.0364 (6)−0.0362 (6)−0.0113 (6)−0.0028 (5)
C5—O11.4328 (19)C10—O21.3501 (19)
C5—C41.498 (2)O2—H20.8200
C5—H5A0.9700C14—C131.359 (2)
C5—H5B0.9700C14—O31.3793 (16)
C2—C41.319 (2)C14—C151.467 (2)
C2—C11.495 (3)C12—O41.2513 (17)
C2—C31.503 (2)C12—C131.440 (2)
C4—H40.9300C13—O51.3590 (17)
C3—H3A0.9600C19—C181.380 (2)
C3—H3B0.9600C19—C201.384 (2)
C3—H3C0.9600C19—H190.9300
C1—H1A0.9600C15—C201.396 (2)
C1—H1B0.9600C15—C161.404 (2)
C1—H1C0.9600C18—O71.3655 (19)
O1—C61.3581 (18)C18—C171.396 (2)
C9—C81.390 (2)C16—C171.372 (2)
C9—C101.419 (2)C16—H160.9300
C9—C121.433 (2)C17—O61.3713 (18)
C7—C61.385 (2)C20—H200.9300
C7—C81.389 (2)O7—C211.421 (2)
C7—H70.9300O6—H60.8200
C8—O31.3650 (18)C21—H21A0.9600
C11—C101.369 (2)C21—H21B0.9600
C11—C61.400 (2)C21—H21C0.9600
C11—H110.9300O5—H50.8200
O1—C5—C4105.77 (13)O2—C10—C9119.45 (14)
O1—C5—H5A110.6C11—C10—C9120.28 (14)
C4—C5—H5A110.6C10—O2—H2109.5
O1—C5—H5B110.6C13—C14—O3119.66 (13)
C4—C5—H5B110.6C13—C14—C15128.81 (13)
H5A—C5—H5B108.7O3—C14—C15111.53 (12)
C4—C2—C1123.26 (17)O4—C12—C9123.70 (14)
C4—C2—C3121.40 (17)O4—C12—C13119.81 (14)
C1—C2—C3115.33 (16)C9—C12—C13116.49 (13)
C2—C4—C5126.59 (16)C14—C13—O5121.85 (14)
C2—C4—H4116.7C14—C13—C12121.80 (13)
C5—C4—H4116.7O5—C13—C12116.35 (13)
C2—C3—H3A109.5C8—O3—C14121.51 (11)
C2—C3—H3B109.5C18—C19—C20120.15 (14)
H3A—C3—H3B109.5C18—C19—H19119.9
C2—C3—H3C109.5C20—C19—H19119.9
H3A—C3—H3C109.5C20—C15—C16118.06 (14)
H3B—C3—H3C109.5C20—C15—C14120.56 (13)
C2—C1—H1A109.5C16—C15—C14121.38 (13)
C2—C1—H1B109.5O7—C18—C19126.65 (13)
H1A—C1—H1B109.5O7—C18—C17114.35 (14)
C2—C1—H1C109.5C19—C18—C17118.99 (14)
H1A—C1—H1C109.5C17—C16—C15120.24 (13)
H1B—C1—H1C109.5C17—C16—H16119.9
C6—O1—C5119.15 (12)C15—C16—H16119.9
C8—C9—C10118.12 (14)C16—C17—O6118.83 (13)
C8—C9—C12119.70 (14)C16—C17—C18121.24 (14)
C10—C9—C12122.18 (14)O6—C17—C18119.93 (14)
C6—C7—C8117.30 (14)C19—C20—C15121.31 (14)
C6—C7—H7121.3C19—C20—H20119.3
C8—C7—H7121.3C15—C20—H20119.3
O3—C8—C7116.47 (13)C18—O7—C21117.28 (13)
O3—C8—C9120.82 (13)C17—O6—H6109.5
C7—C8—C9122.71 (14)O7—C21—H21A109.5
C10—C11—C6119.59 (15)O7—C21—H21B109.5
C10—C11—H11120.2H21A—C21—H21B109.5
C6—C11—H11120.2O7—C21—H21C109.5
O1—C6—C7124.01 (14)H21A—C21—H21C109.5
O1—C6—C11114.00 (14)H21B—C21—H21C109.5
C7—C6—C11121.99 (14)C13—O5—H5109.5
O2—C10—C11120.26 (15)
C1—C2—C4—C50.8 (3)C15—C14—C13—C12178.36 (14)
C3—C2—C4—C5−179.14 (17)O4—C12—C13—C14−179.72 (15)
O1—C5—C4—C2168.75 (17)C9—C12—C13—C140.2 (2)
C4—C5—O1—C6176.45 (14)O4—C12—C13—O5−0.4 (2)
C6—C7—C8—O3−179.33 (14)C9—C12—C13—O5179.51 (14)
C6—C7—C8—C90.5 (2)C7—C8—O3—C14179.37 (13)
C10—C9—C8—O3179.69 (14)C9—C8—O3—C14−0.5 (2)
C12—C9—C8—O3−0.8 (2)C13—C14—O3—C81.6 (2)
C10—C9—C8—C7−0.2 (2)C15—C14—O3—C8−178.21 (12)
C12—C9—C8—C7179.31 (14)C13—C14—C15—C20179.39 (15)
C5—O1—C6—C79.8 (2)O3—C14—C15—C20−0.8 (2)
C5—O1—C6—C11−170.35 (15)C13—C14—C15—C16−0.9 (2)
C8—C7—C6—O1179.81 (14)O3—C14—C15—C16178.91 (13)
C8—C7—C6—C11−0.1 (2)C20—C19—C18—O7−179.26 (16)
C10—C11—C6—O1179.35 (15)C20—C19—C18—C170.2 (2)
C10—C11—C6—C7−0.8 (3)C20—C15—C16—C170.4 (2)
C6—C11—C10—O2−178.46 (17)C14—C15—C16—C17−179.33 (14)
C6—C11—C10—C91.1 (3)C15—C16—C17—O6−179.80 (14)
C8—C9—C10—O2178.91 (15)C15—C16—C17—C18−0.3 (2)
C12—C9—C10—O2−0.5 (3)O7—C18—C17—C16179.55 (15)
C8—C9—C10—C11−0.7 (2)C19—C18—C17—C160.0 (2)
C12—C9—C10—C11179.86 (16)O7—C18—C17—O6−1.0 (2)
C8—C9—C12—O4−179.14 (15)C19—C18—C17—O6179.51 (15)
C10—C9—C12—O40.3 (3)C18—C19—C20—C15−0.1 (3)
C8—C9—C12—C131.0 (2)C16—C15—C20—C19−0.2 (2)
C10—C9—C12—C13−179.57 (15)C14—C15—C20—C19179.55 (15)
O3—C14—C13—O5179.23 (13)C19—C18—O7—C21−2.5 (3)
C15—C14—C13—O5−1.0 (3)C17—C18—O7—C21178.09 (16)
O3—C14—C13—C12−1.5 (2)
D—H···AD—HH···AD···AD—H···A
O5—H5···O40.822.212.6682 (17)115
O5—H5···O6i0.822.042.7914 (16)153
O6—H6···O70.822.192.6440 (16)115
O2—H2···O40.821.882.6155 (17)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5⋯O40.822.212.6682 (17)115
O5—H5⋯O6i0.822.042.7914 (16)153
O6—H6⋯O70.822.192.6440 (16)115
O2—H2⋯O40.821.882.6155 (17)148

Symmetry code: (i) .

  3 in total

1.  Two crystal polymorphs of a flavonoid from Melicope ellyrana.

Authors:  G Smith; J P Bartley; E Wang; R C Bott
Journal:  Acta Crystallogr C       Date:  2001-11-13       Impact factor: 1.172

2.  A geranylacetophenone from the leaves of Melicope ptelefolia.

Authors:  Khozirah Shaari; Suryati Safri; Faridah Abas; Nordin Hj Lajis; D A Israf
Journal:  Nat Prod Res       Date:  2006-05-10       Impact factor: 2.861

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total

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