Literature DB >> 21522402

5-Bromo-3-(indan-1-yl-oxy)pyridin-2-amine.

Sujin Cho-Schultz, John C Kath, Curtis Moore, Arnold L Rheingold, Alex Yanovsky.   

Abstract

The title compound, C(14)H(13)BrN(2)O, was obtained by reaction of indan-1-yl methane-sulfonate with 2-amino-5-bromo-pyridin-3-ol in the presence of caesium carbonate. The indane ring system is approximately planar [all but one of the C atoms are coplanar within 0.03 Å, the latter atom being displaced by 0.206 (2) Å from the mean plane through the remaining atoms] and forms a dihedral angle of 58.41 (4)° with the pyridine ring. In the crystal, centrosymmetrically related mol-ecules are linked into dimers by N-H⋯N hydrogen bonds.

Entities:  

Year:  2011        PMID: 21522402      PMCID: PMC3052095          DOI: 10.1107/S1600536811005332

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures with an indane group linked to a pyridine derivative through a C—O—C bridge, see: Dinçer et al. (2004 ▶); Lifshits et al. (2008 ▶).

Experimental

Crystal data

C14H13BrN2O M = 305.17 Monoclinic, a = 11.3944 (18) Å b = 9.4515 (15) Å c = 12.438 (2) Å β = 110.678 (2)° V = 1253.2 (3) Å3 Z = 4 Mo Kα radiation μ = 3.27 mm−1 T = 100 K 0.21 × 0.16 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.547, T max = 0.780 23669 measured reflections 2942 independent reflections 2595 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.054 S = 1.03 2942 reflections 163 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811005332/rz2555sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005332/rz2555Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13BrN2OF(000) = 616
Mr = 305.17Dx = 1.617 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9797 reflections
a = 11.3944 (18) Åθ = 2.8–27.7°
b = 9.4515 (15) ŵ = 3.27 mm1
c = 12.438 (2) ÅT = 100 K
β = 110.678 (2)°Block, colorless
V = 1253.2 (3) Å30.21 × 0.16 × 0.08 mm
Z = 4
Bruker APEXII CCD diffractometer2942 independent reflections
Radiation source: fine-focus sealed tube2595 reflections with I > 2σ(I)
graphiteRint = 0.046
φ and ω scansθmax = 28.3°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −15→14
Tmin = 0.547, Tmax = 0.780k = −12→12
23669 measured reflectionsl = −16→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.023Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.054H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0191P)2 + 0.7815P] where P = (Fo2 + 2Fc2)/3
2942 reflections(Δ/σ)max = 0.001
163 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br11.235622 (16)1.080477 (17)1.070416 (15)0.02063 (6)
O10.95752 (11)0.77404 (12)0.71352 (10)0.0192 (3)
N11.06647 (13)0.68706 (14)1.01301 (12)0.0179 (3)
N20.95112 (15)0.56292 (15)0.84811 (13)0.0227 (3)
H2NA0.94770.48940.89030.027*
H2NB0.91500.55910.77290.027*
C11.01219 (16)0.68247 (17)0.89913 (14)0.0163 (3)
C21.01793 (15)0.79884 (17)0.82822 (14)0.0165 (3)
C31.08206 (16)0.91835 (17)0.87805 (15)0.0171 (3)
H31.08680.99790.83310.020*
C41.14048 (16)0.91900 (16)0.99797 (15)0.0161 (3)
C51.13089 (16)0.80499 (17)1.06228 (15)0.0180 (3)
H51.17040.80861.14350.022*
C60.95743 (16)0.88611 (17)0.63483 (14)0.0168 (3)
H61.04310.92830.65590.020*
C70.85977 (17)1.00246 (18)0.62819 (15)0.0209 (4)
H7A0.80030.96960.66470.025*
H7B0.90191.08920.66810.025*
C80.78992 (16)1.03247 (17)0.49914 (15)0.0184 (3)
H8A0.69831.03850.48150.022*
H8B0.81931.12200.47590.022*
C90.82218 (16)0.90756 (16)0.43914 (15)0.0164 (3)
C100.91601 (15)0.82524 (17)0.51553 (14)0.0163 (3)
C110.96492 (16)0.70772 (17)0.47841 (15)0.0200 (4)
H111.02840.65170.53160.024*
C120.91930 (17)0.67388 (18)0.36230 (16)0.0225 (4)
H120.95230.59470.33530.027*
C130.82497 (17)0.75614 (19)0.28514 (15)0.0224 (4)
H130.79420.73220.20590.027*
C140.77560 (17)0.87233 (18)0.32274 (15)0.0204 (4)
H140.71090.92720.26990.025*
U11U22U33U12U13U23
Br10.02147 (10)0.01833 (9)0.01970 (10)−0.00397 (7)0.00432 (7)−0.00082 (6)
O10.0247 (7)0.0182 (6)0.0125 (6)−0.0039 (5)0.0038 (5)0.0033 (4)
N10.0195 (7)0.0179 (7)0.0156 (7)−0.0011 (6)0.0055 (6)0.0024 (5)
N20.0298 (9)0.0198 (7)0.0140 (7)−0.0074 (6)0.0021 (6)0.0035 (6)
C10.0150 (8)0.0174 (7)0.0168 (8)0.0007 (6)0.0058 (7)0.0029 (6)
C20.0149 (8)0.0209 (8)0.0137 (8)0.0019 (6)0.0052 (6)0.0030 (6)
C30.0178 (8)0.0168 (8)0.0172 (9)0.0013 (6)0.0070 (7)0.0039 (6)
C40.0141 (8)0.0155 (7)0.0184 (8)−0.0002 (6)0.0053 (7)−0.0013 (6)
C50.0187 (9)0.0201 (8)0.0145 (8)0.0009 (7)0.0049 (7)0.0003 (6)
C60.0195 (9)0.0169 (7)0.0140 (8)−0.0022 (6)0.0057 (7)0.0033 (6)
C70.0257 (10)0.0202 (8)0.0161 (9)0.0025 (7)0.0067 (7)0.0009 (7)
C80.0184 (9)0.0171 (8)0.0180 (9)0.0002 (6)0.0045 (7)0.0020 (6)
C90.0170 (8)0.0158 (7)0.0166 (8)−0.0037 (6)0.0062 (7)0.0018 (6)
C100.0159 (8)0.0177 (8)0.0158 (8)−0.0032 (6)0.0061 (7)0.0012 (6)
C110.0179 (9)0.0193 (8)0.0225 (9)−0.0002 (7)0.0067 (7)0.0013 (7)
C120.0233 (9)0.0200 (8)0.0262 (10)−0.0048 (7)0.0113 (8)−0.0068 (7)
C130.0256 (10)0.0258 (9)0.0154 (9)−0.0086 (7)0.0066 (7)−0.0050 (7)
C140.0213 (9)0.0199 (8)0.0169 (9)−0.0040 (7)0.0028 (7)0.0029 (7)
Br1—C41.9044 (16)C7—C81.545 (2)
O1—C21.368 (2)C7—H7A0.9900
O1—C61.4419 (19)C7—H7B0.9900
N1—C11.331 (2)C8—C91.510 (2)
N1—C51.356 (2)C8—H8A0.9900
N2—C11.361 (2)C8—H8B0.9900
N2—H2NA0.8800C9—C101.391 (2)
N2—H2NB0.8800C9—C141.395 (2)
C1—C21.426 (2)C10—C111.393 (2)
C2—C31.369 (2)C11—C121.388 (3)
C3—C41.402 (2)C11—H110.9500
C3—H30.9500C12—C131.397 (3)
C4—C51.369 (2)C12—H120.9500
C5—H50.9500C13—C141.388 (3)
C6—C101.504 (2)C13—H130.9500
C6—C71.546 (2)C14—H140.9500
C6—H61.0000
C2—O1—C6117.49 (13)C6—C7—H7A110.4
C1—N1—C5118.79 (14)C8—C7—H7B110.4
C1—N2—H2NA120.0C6—C7—H7B110.4
C1—N2—H2NB120.0H7A—C7—H7B108.6
H2NA—N2—H2NB120.0C9—C8—C7104.11 (13)
N1—C1—N2119.49 (15)C9—C8—H8A110.9
N1—C1—C2121.84 (15)C7—C8—H8A110.9
N2—C1—C2118.66 (15)C9—C8—H8B110.9
O1—C2—C3127.25 (15)C7—C8—H8B110.9
O1—C2—C1113.39 (14)H8A—C8—H8B109.0
C3—C2—C1119.35 (15)C10—C9—C14119.63 (16)
C2—C3—C4117.53 (15)C10—C9—C8111.25 (15)
C2—C3—H3121.2C14—C9—C8129.04 (16)
C4—C3—H3121.2C9—C10—C11121.40 (16)
C5—C4—C3120.80 (15)C9—C10—C6110.97 (14)
C5—C4—Br1120.25 (13)C11—C10—C6127.55 (15)
C3—C4—Br1118.94 (12)C12—C11—C10118.81 (16)
N1—C5—C4121.67 (16)C12—C11—H11120.6
N1—C5—H5119.2C10—C11—H11120.6
C4—C5—H5119.2C11—C12—C13120.06 (16)
O1—C6—C10108.27 (13)C11—C12—H12120.0
O1—C6—C7112.76 (14)C13—C12—H12120.0
C10—C6—C7104.49 (14)C14—C13—C12120.92 (16)
O1—C6—H6110.4C14—C13—H13119.5
C10—C6—H6110.4C12—C13—H13119.5
C7—C6—H6110.4C13—C14—C9119.18 (16)
C8—C7—C6106.45 (14)C13—C14—H14120.4
C8—C7—H7A110.4C9—C14—H14120.4
D—H···AD—HH···AD···AD—H···A
N2—H2NA···N1i0.882.102.975 (2)178
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2NA⋯N1i0.882.102.975 (2)178

Symmetry code: (i) .

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