| Literature DB >> 21522375 |
Rajshekhar Karpoormath, Patrick Govender, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire.
Abstract
The structure of the title compound, C(25)H(27)NO, is a mono-ketone penta-cyclo-undecane (PCU) mol-ecule bearing a tertiary amine group. One of the methyl-ene groups in the PCU is disordered over two orientations with site-occupancy factors of 0.621 (7) and 0.379 (7).Entities:
Year: 2011 PMID: 21522375 PMCID: PMC3051940 DOI: 10.1107/S160053681100479X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H21NO | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 3299 reflections |
| θ = 5.2–69.2° | |
| µ = 0.59 mm−1 | |
| β = 97.100 (2)° | Needle, colourless |
| 0.43 × 0.33 × 0.25 mm | |
| Bruker Kappa DUO APEXII diffractometer | 3303 independent reflections |
| Radiation source: fine-focus sealed tube | 3240 reflections with |
| graphite | |
| 1.2° φ scans and ω | θmax = 69.2°, θmin = 3.7° |
| Absorption correction: multi-scan ( | |
| 24662 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3303 reflections | Δρmax = 0.48 e Å−3 |
| 255 parameters | Δρmin = −0.46 e Å−3 |
| 24 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0020 (4) |
| Experimental. Half sphere of data collected using |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| O1 | 0.1742 (2) | 0.13889 (10) | 0.19402 (10) | 0.0394 (4) | |
| N1 | −0.2672 (3) | 0.05165 (10) | 0.14408 (10) | 0.0271 (4) | |
| C2 | −0.4175 (5) | 0.27147 (16) | 0.1215 (3) | 0.0763 (12) | |
| C3 | −0.3558 (3) | 0.19546 (14) | 0.17218 (17) | 0.0423 (6) | |
| H3 | −0.4438 | 0.1857 | 0.2145 | 0.051* | |
| C4 | −0.3624 (3) | 0.12730 (13) | 0.11264 (14) | 0.0347 (5) | |
| H4 | −0.5077 | 0.1160 | 0.0920 | 0.042* | |
| C5 | −0.2577 (4) | 0.16781 (17) | 0.04842 (17) | 0.0493 (7) | |
| H5 | −0.2759 | 0.1387 | −0.0029 | 0.059* | |
| C6 | −0.3393 (6) | 0.25559 (17) | 0.04539 (18) | 0.0652 (10) | |
| C7 | −0.1306 (5) | 0.30438 (16) | 0.16140 (19) | 0.0612 (9) | |
| C8 | −0.1293 (3) | 0.22060 (14) | 0.20361 (17) | 0.0422 (6) | |
| H8 | −0.0991 | 0.2233 | 0.2619 | 0.051* | |
| C9 | 0.0227 (3) | 0.17342 (14) | 0.16393 (15) | 0.0361 (5) | |
| C10 | −0.0309 (4) | 0.19225 (18) | 0.07827 (17) | 0.0497 (7) | |
| H10 | 0.0730 | 0.1760 | 0.0437 | 0.060* | |
| C11 | −0.0792 (5) | 0.2836 (2) | 0.0801 (2) | 0.0775 (12) | |
| C12 | −0.3867 (3) | 0.01601 (13) | 0.20230 (13) | 0.0311 (5) | |
| H12A | −0.3795 | −0.0440 | 0.1982 | 0.037* | |
| H12B | −0.5311 | 0.0318 | 0.1884 | 0.037* | |
| C13 | −0.3230 (3) | 0.03943 (13) | 0.28639 (13) | 0.0307 (5) | |
| C14 | −0.4688 (4) | 0.04214 (14) | 0.33779 (14) | 0.0372 (5) | |
| H14 | −0.6085 | 0.0347 | 0.3185 | 0.045* | |
| C15 | −0.4127 (4) | 0.05563 (15) | 0.41683 (15) | 0.0436 (6) | |
| H15 | −0.5139 | 0.0568 | 0.4514 | 0.052* | |
| C16 | −0.2108 (4) | 0.06739 (16) | 0.44562 (15) | 0.0467 (6) | |
| H16 | −0.1722 | 0.0761 | 0.4999 | 0.056* | |
| C17 | −0.0654 (4) | 0.06631 (17) | 0.39452 (15) | 0.0452 (6) | |
| H17 | 0.0736 | 0.0755 | 0.4138 | 0.054* | |
| C18 | −0.1200 (4) | 0.05196 (15) | 0.31545 (14) | 0.0384 (6) | |
| H18 | −0.0184 | 0.0507 | 0.2810 | 0.046* | |
| C19 | −0.2474 (4) | −0.00746 (14) | 0.08166 (13) | 0.0349 (5) | |
| H19A | −0.1791 | 0.0190 | 0.0403 | 0.042* | |
| H19B | −0.3851 | −0.0244 | 0.0580 | 0.042* | |
| C20 | −0.1277 (3) | −0.08185 (13) | 0.11058 (12) | 0.0312 (5) | |
| C21 | 0.0737 (3) | −0.07388 (14) | 0.14401 (14) | 0.0381 (5) | |
| H21 | 0.1342 | −0.0214 | 0.1496 | 0.046* | |
| C22 | 0.1864 (4) | −0.14184 (16) | 0.16920 (16) | 0.0434 (6) | |
| H22 | 0.3238 | −0.1357 | 0.1921 | 0.052* | |
| C23 | 0.1013 (4) | −0.21862 (15) | 0.16137 (15) | 0.0416 (6) | |
| H23 | 0.1796 | −0.2652 | 0.1785 | 0.050* | |
| C24 | −0.0992 (4) | −0.22698 (15) | 0.12834 (15) | 0.0413 (6) | |
| H24 | −0.1593 | −0.2795 | 0.1228 | 0.050* | |
| C25 | −0.2121 (4) | −0.15900 (14) | 0.10333 (14) | 0.0363 (5) | |
| H25 | −0.3498 | −0.1653 | 0.0808 | 0.044* | |
| C1A | −0.3205 (6) | 0.3417 (2) | 0.1498 (2) | 0.0414 (11) | 0.621 (7) |
| H1A | −0.3673 | 0.3612 | 0.1989 | 0.050* | 0.621 (7) |
| H1B | −0.3281 | 0.3860 | 0.1106 | 0.050* | 0.621 (7) |
| C1B | −0.2299 (8) | 0.3246 (3) | 0.0321 (4) | 0.0458 (19) | 0.379 (7) |
| H1D | −0.2791 | 0.3753 | 0.0546 | 0.055* | 0.379 (7) |
| H1C | −0.2020 | 0.3321 | −0.0225 | 0.055* | 0.379 (7) |
| O1 | 0.0224 (8) | 0.0389 (9) | 0.0564 (10) | 0.0003 (6) | 0.0031 (7) | 0.0051 (7) |
| N1 | 0.0261 (9) | 0.0239 (9) | 0.0310 (9) | 0.0000 (7) | 0.0019 (7) | 0.0019 (7) |
| C2 | 0.0606 (19) | 0.0306 (14) | 0.148 (3) | 0.0175 (13) | 0.055 (2) | 0.0285 (18) |
| C3 | 0.0238 (11) | 0.0256 (12) | 0.0770 (18) | 0.0021 (9) | 0.0049 (11) | −0.0047 (11) |
| C4 | 0.0248 (10) | 0.0278 (11) | 0.0495 (13) | 0.0006 (8) | −0.0037 (9) | 0.0082 (10) |
| C5 | 0.0439 (14) | 0.0489 (16) | 0.0522 (15) | −0.0049 (12) | −0.0061 (12) | 0.0247 (12) |
| C6 | 0.092 (2) | 0.0341 (14) | 0.0589 (17) | −0.0159 (15) | −0.0342 (16) | 0.0170 (13) |
| C7 | 0.0715 (19) | 0.0268 (13) | 0.075 (2) | 0.0005 (12) | −0.0338 (16) | −0.0049 (13) |
| C8 | 0.0278 (12) | 0.0284 (12) | 0.0699 (17) | −0.0016 (9) | 0.0041 (11) | −0.0090 (11) |
| C9 | 0.0243 (11) | 0.0292 (11) | 0.0549 (14) | −0.0052 (9) | 0.0055 (10) | 0.0056 (10) |
| C10 | 0.0382 (13) | 0.0525 (16) | 0.0595 (16) | −0.0045 (11) | 0.0098 (12) | 0.0249 (13) |
| C11 | 0.066 (2) | 0.059 (2) | 0.117 (3) | 0.0220 (16) | 0.050 (2) | 0.052 (2) |
| C12 | 0.0262 (10) | 0.0269 (11) | 0.0404 (12) | −0.0041 (8) | 0.0055 (9) | 0.0009 (9) |
| C13 | 0.0311 (11) | 0.0240 (10) | 0.0378 (12) | 0.0013 (8) | 0.0069 (9) | 0.0060 (9) |
| C14 | 0.0361 (12) | 0.0309 (12) | 0.0464 (13) | 0.0036 (9) | 0.0124 (10) | 0.0049 (10) |
| C15 | 0.0570 (16) | 0.0351 (13) | 0.0423 (13) | 0.0077 (11) | 0.0206 (12) | 0.0067 (10) |
| C16 | 0.0684 (18) | 0.0373 (13) | 0.0338 (12) | 0.0072 (12) | 0.0040 (12) | 0.0047 (10) |
| C17 | 0.0445 (14) | 0.0483 (15) | 0.0405 (13) | 0.0008 (11) | −0.0041 (11) | 0.0043 (11) |
| C18 | 0.0327 (12) | 0.0435 (14) | 0.0391 (13) | 0.0013 (10) | 0.0053 (10) | 0.0051 (10) |
| C19 | 0.0376 (12) | 0.0351 (12) | 0.0301 (11) | 0.0035 (9) | −0.0027 (9) | −0.0024 (9) |
| C20 | 0.0345 (11) | 0.0303 (11) | 0.0287 (10) | 0.0012 (9) | 0.0032 (9) | −0.0043 (9) |
| C21 | 0.0333 (12) | 0.0302 (12) | 0.0498 (14) | −0.0017 (9) | 0.0011 (10) | −0.0011 (10) |
| C22 | 0.0316 (12) | 0.0429 (14) | 0.0542 (15) | 0.0035 (10) | −0.0005 (11) | 0.0025 (11) |
| C23 | 0.0460 (14) | 0.0342 (13) | 0.0459 (14) | 0.0110 (10) | 0.0104 (11) | 0.0051 (10) |
| C24 | 0.0497 (14) | 0.0287 (12) | 0.0467 (14) | −0.0026 (10) | 0.0111 (11) | −0.0053 (10) |
| C25 | 0.0351 (12) | 0.0348 (12) | 0.0384 (12) | −0.0025 (9) | 0.0020 (9) | −0.0085 (10) |
| C1A | 0.052 (2) | 0.0290 (19) | 0.043 (2) | 0.0039 (16) | 0.0042 (17) | 0.0013 (15) |
| C1B | 0.062 (4) | 0.031 (3) | 0.046 (3) | 0.002 (3) | 0.013 (3) | 0.005 (3) |
| O1—C9 | 1.211 (3) | C13—C14 | 1.388 (3) |
| N1—C4 | 1.467 (3) | C14—C15 | 1.385 (4) |
| N1—C19 | 1.467 (3) | C14—H14 | 0.9500 |
| N1—C12 | 1.473 (3) | C15—C16 | 1.379 (4) |
| C2—C1A | 1.380 (4) | C15—H15 | 0.9500 |
| C2—C6 | 1.491 (5) | C16—C17 | 1.382 (4) |
| C2—C3 | 1.550 (4) | C16—H16 | 0.9500 |
| C3—C4 | 1.516 (3) | C17—C18 | 1.386 (4) |
| C3—C8 | 1.583 (3) | C17—H17 | 0.9500 |
| C3—H3 | 1.0000 | C18—H18 | 0.9500 |
| C4—C5 | 1.529 (3) | C19—C20 | 1.507 (3) |
| C4—H4 | 1.0000 | C19—H19A | 0.9900 |
| C5—C6 | 1.539 (4) | C19—H19B | 0.9900 |
| C5—C10 | 1.576 (4) | C20—C25 | 1.385 (3) |
| C5—H5 | 1.0000 | C20—C21 | 1.390 (3) |
| C6—C1B | 1.379 (4) | C21—C22 | 1.383 (3) |
| C7—C1A | 1.389 (4) | C21—H21 | 0.9500 |
| C7—C11 | 1.522 (5) | C22—C23 | 1.381 (4) |
| C7—C8 | 1.557 (4) | C22—H22 | 0.9500 |
| C8—C9 | 1.500 (3) | C23—C24 | 1.383 (4) |
| C8—H8 | 1.0000 | C23—H23 | 0.9500 |
| C9—C10 | 1.507 (4) | C24—C25 | 1.383 (3) |
| C10—C11 | 1.536 (4) | C24—H24 | 0.9500 |
| C10—H10 | 1.0000 | C25—H25 | 0.9500 |
| C11—C1B | 1.387 (4) | C1A—H1A | 0.9900 |
| C12—C13 | 1.508 (3) | C1A—H1B | 0.9900 |
| C12—H12A | 0.9900 | C1B—H1D | 0.9900 |
| C12—H12B | 0.9900 | C1B—H1C | 0.9900 |
| C13—C18 | 1.388 (3) | ||
| C4—N1—C19 | 111.32 (17) | C18—C13—C14 | 118.8 (2) |
| C4—N1—C12 | 110.30 (16) | C18—C13—C12 | 121.8 (2) |
| C19—N1—C12 | 109.88 (17) | C14—C13—C12 | 119.2 (2) |
| C1A—C2—C6 | 105.1 (3) | C15—C14—C13 | 120.7 (2) |
| C1A—C2—C3 | 113.4 (3) | C15—C14—H14 | 119.7 |
| C6—C2—C3 | 105.0 (2) | C13—C14—H14 | 119.7 |
| C4—C3—C2 | 103.3 (2) | C16—C15—C14 | 120.4 (2) |
| C4—C3—C8 | 111.81 (19) | C16—C15—H15 | 119.8 |
| C2—C3—C8 | 98.9 (2) | C14—C15—H15 | 119.8 |
| C4—C3—H3 | 113.8 | C15—C16—C17 | 119.2 (2) |
| C2—C3—H3 | 113.8 | C15—C16—H16 | 120.4 |
| C8—C3—H3 | 113.8 | C17—C16—H16 | 120.4 |
| N1—C4—C3 | 113.65 (19) | C16—C17—C18 | 120.8 (2) |
| N1—C4—C5 | 115.1 (2) | C16—C17—H17 | 119.6 |
| C3—C4—C5 | 101.0 (2) | C18—C17—H17 | 119.6 |
| N1—C4—H4 | 108.9 | C17—C18—C13 | 120.2 (2) |
| C3—C4—H4 | 108.9 | C17—C18—H18 | 119.9 |
| C5—C4—H4 | 108.9 | C13—C18—H18 | 119.9 |
| C4—C5—C6 | 104.2 (2) | N1—C19—C20 | 112.67 (17) |
| C4—C5—C10 | 111.9 (2) | N1—C19—H19A | 109.1 |
| C6—C5—C10 | 95.0 (2) | C20—C19—H19A | 109.1 |
| C4—C5—H5 | 114.6 | N1—C19—H19B | 109.1 |
| C6—C5—H5 | 114.6 | C20—C19—H19B | 109.1 |
| C10—C5—H5 | 114.6 | H19A—C19—H19B | 107.8 |
| C1B—C6—C2 | 104.3 (4) | C25—C20—C21 | 118.6 (2) |
| C1B—C6—C5 | 126.0 (4) | C25—C20—C19 | 121.6 (2) |
| C2—C6—C5 | 107.0 (2) | C21—C20—C19 | 119.8 (2) |
| C1A—C7—C11 | 105.5 (3) | C22—C21—C20 | 120.4 (2) |
| C1A—C7—C8 | 114.2 (3) | C22—C21—H21 | 119.8 |
| C11—C7—C8 | 104.1 (2) | C20—C21—H21 | 119.8 |
| C9—C8—C7 | 102.1 (2) | C23—C22—C21 | 120.6 (2) |
| C9—C8—C3 | 111.6 (2) | C23—C22—H22 | 119.7 |
| C7—C8—C3 | 96.9 (2) | C21—C22—H22 | 119.7 |
| C9—C8—H8 | 114.7 | C22—C23—C24 | 119.3 (2) |
| C7—C8—H8 | 114.7 | C22—C23—H23 | 120.4 |
| C3—C8—H8 | 114.7 | C24—C23—H23 | 120.4 |
| O1—C9—C8 | 127.8 (2) | C25—C24—C23 | 120.1 (2) |
| O1—C9—C10 | 126.7 (2) | C25—C24—H24 | 120.0 |
| C8—C9—C10 | 104.5 (2) | C23—C24—H24 | 120.0 |
| C9—C10—C11 | 101.8 (3) | C24—C25—C20 | 121.0 (2) |
| C9—C10—C5 | 111.5 (2) | C24—C25—H25 | 119.5 |
| C11—C10—C5 | 93.7 (2) | C20—C25—H25 | 119.5 |
| C9—C10—H10 | 115.7 | C2—C1A—C7 | 93.1 (3) |
| C11—C10—H10 | 115.7 | C2—C1A—H1A | 113.1 |
| C5—C10—H10 | 115.7 | C7—C1A—H1A | 113.1 |
| C1B—C11—C7 | 102.3 (4) | C2—C1A—H1B | 113.1 |
| C1B—C11—C10 | 126.7 (4) | C7—C1A—H1B | 113.1 |
| C7—C11—C10 | 108.0 (2) | H1A—C1A—H1B | 110.5 |
| N1—C12—C13 | 116.31 (17) | C6—C1B—C11 | 81.7 (3) |
| N1—C12—H12A | 108.2 | C6—C1B—H1D | 115.0 |
| C13—C12—H12A | 108.2 | C11—C1B—H1D | 115.0 |
| N1—C12—H12B | 108.2 | C6—C1B—H1C | 115.0 |
| C13—C12—H12B | 108.2 | C11—C1B—H1C | 115.0 |
| H12A—C12—H12B | 107.4 | H1D—C1B—H1C | 112.1 |
| C1A—C2—C3—C4 | −145.8 (3) | C4—C5—C10—C11 | −107.2 (3) |
| C6—C2—C3—C4 | −31.6 (3) | C6—C5—C10—C11 | 0.3 (3) |
| C1A—C2—C3—C8 | −30.7 (3) | C1A—C7—C11—C1B | 10.1 (3) |
| C6—C2—C3—C8 | 83.4 (3) | C8—C7—C11—C1B | 130.7 (3) |
| C19—N1—C4—C3 | −170.57 (19) | C1A—C7—C11—C10 | −125.5 (3) |
| C12—N1—C4—C3 | 67.2 (2) | C8—C7—C11—C10 | −4.9 (3) |
| C19—N1—C4—C5 | −54.8 (3) | C9—C10—C11—C1B | −142.8 (4) |
| C12—N1—C4—C5 | −177.03 (19) | C5—C10—C11—C1B | −29.9 (5) |
| C2—C3—C4—N1 | 167.47 (19) | C9—C10—C11—C7 | −21.3 (3) |
| C8—C3—C4—N1 | 62.0 (3) | C5—C10—C11—C7 | 91.6 (3) |
| C2—C3—C4—C5 | 43.6 (2) | C4—N1—C12—C13 | −92.8 (2) |
| C8—C3—C4—C5 | −61.8 (2) | C19—N1—C12—C13 | 144.12 (18) |
| N1—C4—C5—C6 | −162.24 (19) | N1—C12—C13—C18 | −35.2 (3) |
| C3—C4—C5—C6 | −39.4 (2) | N1—C12—C13—C14 | 150.2 (2) |
| N1—C4—C5—C10 | −60.8 (3) | C18—C13—C14—C15 | −1.1 (3) |
| C3—C4—C5—C10 | 62.1 (3) | C12—C13—C14—C15 | 173.7 (2) |
| C1A—C2—C6—C1B | −8.8 (3) | C13—C14—C15—C16 | 0.6 (4) |
| C3—C2—C6—C1B | −128.7 (3) | C14—C15—C16—C17 | 0.6 (4) |
| C1A—C2—C6—C5 | 126.6 (3) | C15—C16—C17—C18 | −1.3 (4) |
| C3—C2—C6—C5 | 6.7 (3) | C16—C17—C18—C13 | 0.8 (4) |
| C4—C5—C6—C1B | 143.1 (4) | C14—C13—C18—C17 | 0.4 (4) |
| C10—C5—C6—C1B | 29.1 (5) | C12—C13—C18—C17 | −174.3 (2) |
| C4—C5—C6—C2 | 20.3 (3) | C4—N1—C19—C20 | 173.10 (18) |
| C10—C5—C6—C2 | −93.7 (3) | C12—N1—C19—C20 | −64.4 (2) |
| C1A—C7—C8—C9 | 144.0 (3) | N1—C19—C20—C25 | 120.5 (2) |
| C11—C7—C8—C9 | 29.5 (3) | N1—C19—C20—C21 | −60.8 (3) |
| C1A—C7—C8—C3 | 30.1 (3) | C25—C20—C21—C22 | 0.1 (4) |
| C11—C7—C8—C3 | −84.4 (2) | C19—C20—C21—C22 | −178.6 (2) |
| C4—C3—C8—C9 | 2.7 (3) | C20—C21—C22—C23 | 0.2 (4) |
| C2—C3—C8—C9 | −105.6 (3) | C21—C22—C23—C24 | −0.4 (4) |
| C4—C3—C8—C7 | 108.6 (2) | C22—C23—C24—C25 | 0.2 (4) |
| C2—C3—C8—C7 | 0.3 (3) | C23—C24—C25—C20 | 0.1 (4) |
| C7—C8—C9—O1 | 124.9 (3) | C21—C20—C25—C24 | −0.3 (3) |
| C3—C8—C9—O1 | −132.5 (3) | C19—C20—C25—C24 | 178.4 (2) |
| C7—C8—C9—C10 | −44.2 (2) | C6—C2—C1A—C7 | −67.4 (3) |
| C3—C8—C9—C10 | 58.4 (3) | C3—C2—C1A—C7 | 46.7 (4) |
| O1—C9—C10—C11 | −128.6 (3) | C11—C7—C1A—C2 | 66.7 (3) |
| C8—C9—C10—C11 | 40.7 (2) | C8—C7—C1A—C2 | −46.9 (4) |
| O1—C9—C10—C5 | 132.6 (3) | C2—C6—C1B—C11 | 83.9 (4) |
| C8—C9—C10—C5 | −58.1 (3) | C5—C6—C1B—C11 | −40.0 (5) |
| C4—C5—C10—C9 | −2.9 (3) | C7—C11—C1B—C6 | −82.9 (4) |
| C6—C5—C10—C9 | 104.5 (3) | C10—C11—C1B—C6 | 40.9 (5) |