Literature DB >> 21522362

Methanaminium 3,4,5,6-tetra-chloro-2-(meth-oxy-carbon-yl)benzoate.

Jian Li1.   

Abstract

In the crystal structure of the title compound, CH(6)N(+)·C(9)H(3)Cl(4)O(4) (-), the N atom of the methyl-amine mol-ecule is protonated and hydrogen bonded to the carboxyl group of the 3,4,5,6-tetra-chloro-2-(meth-oxy-carbon-yl)benzoate anion. The anions are linked by the cations via inter-molecular N-H⋯O inter-actions into chains extending along the c axis.

Entities:  

Year:  2011        PMID: 21522362      PMCID: PMC3052077          DOI: 10.1107/S1600536811004351

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Li (2011 ▶); Liang (2008 ▶).

Experimental

Crystal data

CH6NC9H3Cl4O4 M = 348.98 Monoclinic, a = 14.3138 (13) Å b = 14.2231 (14) Å c = 6.7648 (7) Å β = 91.021 (1)° V = 1377.0 (2) Å3 Z = 4 Mo Kα radiation μ = 0.87 mm−1 T = 298 K 0.45 × 0.40 × 0.38 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.697, T max = 0.734 6756 measured reflections 2413 independent reflections 1752 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.092 S = 1.06 2413 reflections 176 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.26 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811004351/nc2219sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811004351/nc2219Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
CH6N+·C9H3Cl4O4F(000) = 704
Mr = 348.98Dx = 1.683 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 14.3138 (13) ÅCell parameters from 2427 reflections
b = 14.2231 (14) Åθ = 2.9–27.9°
c = 6.7648 (7) ŵ = 0.87 mm1
β = 91.021 (1)°T = 298 K
V = 1377.0 (2) Å3Block, colorless
Z = 40.45 × 0.40 × 0.38 mm
Bruker SMART CCD area-detector diffractometer2413 independent reflections
Radiation source: fine-focus sealed tube1752 reflections with I > 2σ(I)
graphiteRint = 0.034
phi and ω scansθmax = 25.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −10→17
Tmin = 0.697, Tmax = 0.734k = −16→15
6756 measured reflectionsl = −8→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.092w = 1/[σ2(Fo2) + (0.036P)2 + 0.764P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2413 reflectionsΔρmax = 0.27 e Å3
176 parametersΔρmin = −0.26 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0169 (12)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.59548 (5)0.44954 (5)0.68418 (11)0.0403 (2)
Cl20.75122 (6)0.31368 (5)0.83762 (13)0.0504 (3)
Cl30.94431 (6)0.31160 (6)0.64018 (14)0.0560 (3)
Cl40.97935 (5)0.43587 (5)0.26682 (13)0.0498 (3)
N10.56810 (18)0.82381 (16)0.3492 (4)0.0405 (6)
H1A0.58780.86000.44890.061*
H1B0.59500.84220.23820.061*
H1C0.58320.76420.37430.061*
O10.82037 (15)0.65000 (13)0.1792 (3)0.0405 (5)
O20.8307 (2)0.52896 (16)−0.0279 (3)0.0647 (7)
O30.61656 (15)0.57063 (15)0.1743 (3)0.0481 (6)
O40.62782 (14)0.64439 (13)0.4641 (3)0.0408 (5)
C10.82003 (19)0.5598 (2)0.1337 (4)0.0345 (7)
C20.64751 (19)0.58072 (18)0.3451 (4)0.0303 (6)
C30.80417 (19)0.50129 (17)0.3163 (4)0.0282 (6)
C40.71960 (19)0.50884 (17)0.4148 (4)0.0269 (6)
C50.70398 (18)0.44908 (17)0.5740 (4)0.0274 (6)
C60.77229 (19)0.38691 (18)0.6410 (4)0.0303 (6)
C70.85805 (19)0.38385 (18)0.5494 (4)0.0325 (7)
C80.87294 (19)0.43961 (18)0.3837 (4)0.0327 (7)
C90.8303 (3)0.7137 (2)0.0141 (5)0.0592 (10)
H9A0.88730.7001−0.05280.089*
H9B0.83190.77730.06170.089*
H9C0.77830.7061−0.07600.089*
C100.4658 (2)0.8321 (2)0.3267 (5)0.0543 (9)
H10A0.43670.81270.44680.082*
H10B0.44440.79280.21970.082*
H10C0.44950.89630.29880.082*
U11U22U33U12U13U23
Cl10.0319 (4)0.0426 (4)0.0470 (5)0.0041 (3)0.0120 (3)0.0124 (3)
Cl20.0489 (5)0.0470 (5)0.0554 (5)0.0046 (4)0.0012 (4)0.0251 (4)
Cl30.0397 (5)0.0524 (5)0.0758 (6)0.0189 (4)−0.0053 (4)0.0093 (4)
Cl40.0323 (4)0.0515 (5)0.0660 (6)0.0021 (4)0.0166 (4)−0.0093 (4)
N10.0551 (17)0.0323 (13)0.0341 (14)0.0043 (12)−0.0040 (12)−0.0006 (11)
O10.0548 (14)0.0320 (11)0.0350 (11)−0.0030 (10)0.0087 (10)0.0036 (9)
O20.097 (2)0.0604 (15)0.0369 (14)−0.0146 (14)0.0208 (13)−0.0099 (11)
O30.0471 (13)0.0616 (14)0.0352 (12)0.0050 (11)−0.0105 (10)0.0095 (10)
O40.0451 (13)0.0313 (11)0.0462 (13)0.0112 (9)0.0059 (10)0.0040 (9)
C10.0297 (16)0.0423 (17)0.0317 (17)−0.0031 (13)0.0049 (13)−0.0011 (13)
C20.0264 (15)0.0295 (15)0.0352 (17)0.0005 (12)0.0043 (13)0.0089 (13)
C30.0310 (15)0.0240 (13)0.0295 (15)−0.0035 (12)0.0012 (12)−0.0042 (11)
C40.0284 (15)0.0263 (14)0.0261 (14)−0.0004 (12)−0.0011 (12)−0.0018 (11)
C50.0226 (14)0.0283 (14)0.0314 (15)−0.0005 (12)0.0022 (12)−0.0028 (12)
C60.0341 (16)0.0252 (14)0.0315 (15)−0.0017 (12)−0.0027 (13)0.0011 (11)
C70.0260 (15)0.0258 (14)0.0454 (17)0.0046 (12)−0.0043 (13)−0.0050 (12)
C80.0296 (15)0.0294 (14)0.0391 (17)−0.0011 (12)0.0060 (13)−0.0095 (13)
C90.074 (3)0.051 (2)0.054 (2)−0.0026 (19)0.0147 (19)0.0210 (17)
C100.055 (2)0.054 (2)0.053 (2)0.0031 (17)−0.0051 (18)0.0001 (16)
Cl1—C51.734 (3)C2—C41.521 (4)
Cl2—C61.720 (3)C3—C81.389 (4)
Cl3—C71.712 (3)C3—C41.396 (4)
Cl4—C81.729 (3)C4—C51.393 (4)
N1—C101.475 (4)C5—C61.388 (4)
N1—H1A0.8900C6—C71.386 (4)
N1—H1B0.8900C7—C81.393 (4)
N1—H1C0.8900C9—H9A0.9600
O1—C11.319 (3)C9—H9B0.9600
O1—C91.447 (3)C9—H9C0.9600
O2—C11.191 (3)C10—H10A0.9600
O3—C21.238 (3)C10—H10B0.9600
O4—C21.247 (3)C10—H10C0.9600
C1—C31.510 (4)
C10—N1—H1A109.5C7—C6—C5119.9 (2)
C10—N1—H1B109.5C7—C6—Cl2119.7 (2)
H1A—N1—H1B109.5C5—C6—Cl2120.4 (2)
C10—N1—H1C109.5C6—C7—C8119.5 (3)
H1A—N1—H1C109.5C6—C7—Cl3119.8 (2)
H1B—N1—H1C109.5C8—C7—Cl3120.7 (2)
C1—O1—C9115.4 (2)C3—C8—C7120.4 (2)
O2—C1—O1124.9 (3)C3—C8—Cl4119.6 (2)
O2—C1—C3124.9 (3)C7—C8—Cl4119.9 (2)
O1—C1—C3110.2 (2)O1—C9—H9A109.5
O3—C2—O4127.2 (3)O1—C9—H9B109.5
O3—C2—C4116.1 (2)H9A—C9—H9B109.5
O4—C2—C4116.6 (2)O1—C9—H9C109.5
C8—C3—C4120.5 (2)H9A—C9—H9C109.5
C8—C3—C1120.0 (2)H9B—C9—H9C109.5
C4—C3—C1119.5 (2)N1—C10—H10A109.5
C5—C4—C3118.3 (2)N1—C10—H10B109.5
C5—C4—C2122.1 (2)H10A—C10—H10B109.5
C3—C4—C2119.5 (2)N1—C10—H10C109.5
C6—C5—C4121.3 (2)H10A—C10—H10C109.5
C6—C5—Cl1119.5 (2)H10B—C10—H10C109.5
C4—C5—Cl1119.2 (2)
C9—O1—C1—O23.0 (5)C2—C4—C5—Cl15.4 (4)
C9—O1—C1—C3−177.0 (3)C4—C5—C6—C70.2 (4)
O2—C1—C3—C863.3 (4)Cl1—C5—C6—C7177.8 (2)
O1—C1—C3—C8−116.7 (3)C4—C5—C6—Cl2−179.9 (2)
O2—C1—C3—C4−115.9 (3)Cl1—C5—C6—Cl2−2.3 (3)
O1—C1—C3—C464.1 (3)C5—C6—C7—C8−3.6 (4)
C8—C3—C4—C5−3.9 (4)Cl2—C6—C7—C8176.5 (2)
C1—C3—C4—C5175.3 (2)C5—C6—C7—Cl3176.6 (2)
C8—C3—C4—C2176.6 (2)Cl2—C6—C7—Cl3−3.3 (3)
C1—C3—C4—C2−4.2 (4)C4—C3—C8—C70.6 (4)
O3—C2—C4—C5−118.0 (3)C1—C3—C8—C7−178.6 (2)
O4—C2—C4—C563.7 (3)C4—C3—C8—Cl4−176.7 (2)
O3—C2—C4—C361.5 (3)C1—C3—C8—Cl44.1 (3)
O4—C2—C4—C3−116.8 (3)C6—C7—C8—C33.2 (4)
C3—C4—C5—C63.5 (4)Cl3—C7—C8—C3−177.0 (2)
C2—C4—C5—C6−177.0 (2)C6—C7—C8—Cl4−179.5 (2)
C3—C4—C5—Cl1−174.1 (2)Cl3—C7—C8—Cl40.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O3i0.891.862.742 (3)173
N1—H1B···O4ii0.891.932.794 (3)163
N1—H1C···O40.891.922.797 (3)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O3i0.891.862.742 (3)173
N1—H1B⋯O4ii0.891.932.794 (3)163
N1—H1C⋯O40.891.922.797 (3)170

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Ethane-1,2-diaminium 3,4,5,6-tetra-bromo-2-(methoxy-carbon-yl)benzoate methanol solvate.

Authors:  Zu-Pei Liang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-22

3.  Ethanaminium 3,4,5,6-tetra-bromo-2-(meth-oxy-carbon-yl)benzoate methanol monosolvate.

Authors:  Jian Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18
  3 in total

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