Literature DB >> 21522359

1-[(2R,4aR,8R,8aR)-8-Hy-droxy-4a,8-di-methyl-perhydronaphthalen-2-yl]ethan-1-one.

Mohamed Tebbaa, Ahmed Benharref, Moha Berraho, Jean-Claude Daran, Mohamed Akssira, Ahmed Elhakmaoui.   

Abstract

The title compound, C(14)H(24)O(2), was synthesized from ilicic acid, which was isolated from the aerial part of Inula Viscosa- (L) Aiton [or Dittrichia Viscosa- (L) Greuter]. The mol-ecule contains two fused six-membered rings, which both display a chair conformation. In the crystal, mol-ecules are linked into chains propagating along the b axis by inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21522359      PMCID: PMC3052061          DOI: 10.1107/S1600536811004454

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Barrero et al. (2009 ▶). For the medicinal inter­est in Inula Viscosa­ (L) Aiton [or Dittrichia Viscosa­ (L) Greuter], see: Shtacher & Kasshman, (1970 ▶); Bohlmann et al. (1977 ▶); Chiappini et al. (1982 ▶) and for the pharmacological inter­est, see: Azoulay et al. (1986 ▶); Bohlmann et al. (1977 ▶); Ceccherelli et al. (1988 ▶). For background to phytochemical studies of plants, see: Geissman & Toribio (1967 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C14H24O2 M = 224.33 Monoclinic, a = 6.4919 (7) Å b = 9.4057 (9) Å c = 10.3638 (11) Å β = 97.286 (10)° V = 627.71 (11) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 180 K 0.6 × 0.25 × 0.15 mm

Data collection

Agilent Eos Gemini Ultra diffractometer 6571 measured reflections 1362 independent reflections 1262 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.119 S = 1.09 1362 reflections 152 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXL97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811004454/fj2393sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811004454/fj2393Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H24O2F(000) = 248
Mr = 224.33Dx = 1.187 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 6571 reflections
a = 6.4919 (7) Åθ = 2.9–26.4°
b = 9.4057 (9) ŵ = 0.08 mm1
c = 10.3638 (11) ÅT = 180 K
β = 97.286 (10)°Prism, colourless
V = 627.71 (11) Å30.6 × 0.25 × 0.15 mm
Z = 2
Agilent Eos Gemini Ultra diffractometer1262 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.047
graphiteθmax = 26.4°, θmin = 2.9°
Detector resolution: 16.1978 pixels mm-1h = −8→8
φ and ω scansk = −11→11
6571 measured reflectionsl = −12→12
1362 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0935P)2 + 0.0033P] where P = (Fo2 + 2Fc2)/3
1362 reflections(Δ/σ)max < 0.001
152 parametersΔρmax = 0.28 e Å3
1 restraintΔρmin = −0.24 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H20.822 (5)0.709 (4)0.829 (3)0.039 (8)*
C10.8653 (3)0.9919 (2)0.80775 (19)0.0185 (4)
H10.99240.98510.86950.022*
C20.8777 (3)0.8642 (2)0.7154 (2)0.0214 (4)
C31.0704 (3)0.8816 (2)0.6454 (2)0.0261 (5)
H3A1.19340.86930.70810.031*
H3B1.07050.80720.58060.031*
C41.0826 (3)1.0251 (3)0.5791 (2)0.0296 (5)
H4A0.96841.03390.50950.036*
H4B1.21141.03110.54110.036*
C51.0729 (3)1.1462 (2)0.6757 (2)0.0269 (5)
H5A1.07661.23600.63000.032*
H5B1.19471.14200.74030.032*
C60.8776 (3)1.1420 (2)0.7452 (2)0.0220 (5)
C70.9014 (4)1.2512 (2)0.8558 (2)0.0262 (5)
H7A1.03481.23720.90790.031*
H7B0.90081.34590.81860.031*
C80.7305 (4)1.2420 (2)0.9442 (2)0.0267 (5)
H8A0.59731.26380.89450.032*
H8B0.75651.31121.01370.032*
C90.7245 (3)1.0926 (2)1.0020 (2)0.0225 (4)
H90.85961.07371.05270.027*
C100.6895 (3)0.9817 (2)0.89272 (19)0.0208 (4)
H10A0.68670.88710.92980.025*
H10B0.55720.99870.84020.025*
C110.6816 (3)0.8367 (3)0.6205 (2)0.0281 (5)
H11A0.56330.83420.66740.042*
H11B0.69420.74720.57760.042*
H11C0.66430.91140.55700.042*
C120.6859 (4)1.1824 (3)0.6488 (2)0.0291 (5)
H12A0.68901.13140.56880.044*
H12B0.68731.28270.63210.044*
H12C0.56191.15810.68540.044*
C130.5607 (4)1.0824 (2)1.0919 (2)0.0254 (5)
C140.6262 (4)1.0246 (3)1.2248 (2)0.0365 (6)
H14A0.50941.02391.27320.055*
H14B0.73411.08321.26880.055*
H14C0.67700.92931.21810.055*
O10.9229 (2)0.73764 (16)0.79125 (15)0.0258 (4)
O20.3823 (3)1.1216 (2)1.05879 (17)0.0368 (4)
U11U22U33U12U13U23
C10.0181 (9)0.0150 (9)0.0221 (10)0.0001 (7)0.0013 (7)0.0000 (7)
C20.0234 (11)0.0173 (9)0.0236 (10)0.0027 (8)0.0035 (8)0.0001 (8)
C30.0265 (11)0.0247 (11)0.0283 (11)0.0026 (8)0.0079 (8)−0.0005 (9)
C40.0300 (11)0.0311 (12)0.0299 (11)−0.0018 (9)0.0119 (9)0.0033 (9)
C50.0256 (11)0.0237 (11)0.0322 (11)−0.0027 (8)0.0065 (8)0.0053 (9)
C60.0200 (10)0.0188 (10)0.0269 (10)−0.0005 (7)0.0017 (7)0.0025 (8)
C70.0299 (11)0.0163 (10)0.0319 (11)−0.0033 (8)0.0016 (9)−0.0003 (8)
C80.0308 (11)0.0180 (10)0.0309 (11)0.0017 (9)0.0024 (9)−0.0025 (8)
C90.0258 (10)0.0185 (10)0.0229 (10)0.0003 (8)0.0026 (8)−0.0020 (7)
C100.0236 (10)0.0149 (9)0.0241 (10)0.0001 (8)0.0040 (7)−0.0014 (7)
C110.0253 (11)0.0266 (11)0.0321 (11)−0.0011 (8)0.0024 (9)−0.0068 (9)
C120.0298 (12)0.0263 (11)0.0304 (11)0.0037 (9)0.0003 (9)0.0055 (9)
C130.0325 (12)0.0149 (9)0.0296 (11)0.0006 (8)0.0070 (8)−0.0058 (8)
C140.0463 (14)0.0321 (13)0.0324 (12)−0.0030 (11)0.0097 (10)0.0025 (10)
O10.0279 (8)0.0172 (7)0.0341 (8)0.0036 (6)0.0103 (6)0.0028 (6)
O20.0336 (9)0.0360 (10)0.0429 (9)0.0095 (7)0.0132 (7)0.0005 (8)
C1—C101.530 (3)C8—C91.530 (3)
C1—C21.545 (3)C8—H8A0.9700
C1—C61.560 (3)C8—H8B0.9700
C1—H10.9800C9—C131.503 (3)
C2—O11.436 (3)C9—C101.535 (3)
C2—C111.529 (3)C9—H90.9800
C2—C31.532 (3)C10—H10A0.9700
C3—C41.521 (3)C10—H10B0.9700
C3—H3A0.9700C11—H11A0.9600
C3—H3B0.9700C11—H11B0.9600
C4—C51.524 (3)C11—H11C0.9600
C4—H4A0.9700C12—H12A0.9600
C4—H4B0.9700C12—H12B0.9600
C5—C61.536 (3)C12—H12C0.9600
C5—H5A0.9700C13—O21.222 (3)
C5—H5B0.9700C13—C141.493 (3)
C6—C71.533 (3)C14—H14A0.9600
C6—C121.541 (3)C14—H14B0.9600
C7—C81.528 (3)C14—H14C0.9600
C7—H7A0.9700O1—H20.85 (3)
C7—H7B0.9700
C10—C1—C2114.14 (16)H7A—C7—H7B107.7
C10—C1—C6112.18 (15)C7—C8—C9110.07 (17)
C2—C1—C6115.90 (15)C7—C8—H8A109.6
C10—C1—H1104.3C9—C8—H8A109.6
C2—C1—H1104.3C7—C8—H8B109.6
C6—C1—H1104.3C9—C8—H8B109.6
O1—C2—C11107.93 (18)H8A—C8—H8B108.2
O1—C2—C3103.02 (16)C13—C9—C8110.87 (17)
C11—C2—C3112.14 (17)C13—C9—C10111.32 (17)
O1—C2—C1109.18 (15)C8—C9—C10110.12 (16)
C11—C2—C1115.19 (16)C13—C9—H9108.1
C3—C2—C1108.64 (17)C8—C9—H9108.1
C4—C3—C2113.69 (17)C10—C9—H9108.1
C4—C3—H3A108.8C1—C10—C9109.28 (15)
C2—C3—H3A108.8C1—C10—H10A109.8
C4—C3—H3B108.8C9—C10—H10A109.8
C2—C3—H3B108.8C1—C10—H10B109.8
H3A—C3—H3B107.7C9—C10—H10B109.8
C3—C4—C5110.96 (17)H10A—C10—H10B108.3
C3—C4—H4A109.4C2—C11—H11A109.5
C5—C4—H4A109.4C2—C11—H11B109.5
C3—C4—H4B109.4H11A—C11—H11B109.5
C5—C4—H4B109.4C2—C11—H11C109.5
H4A—C4—H4B108.0H11A—C11—H11C109.5
C4—C5—C6113.21 (17)H11B—C11—H11C109.5
C4—C5—H5A108.9C6—C12—H12A109.5
C6—C5—H5A108.9C6—C12—H12B109.5
C4—C5—H5B108.9H12A—C12—H12B109.5
C6—C5—H5B108.9C6—C12—H12C109.5
H5A—C5—H5B107.7H12A—C12—H12C109.5
C7—C6—C5108.80 (16)H12B—C12—H12C109.5
C7—C6—C12108.44 (18)O2—C13—C14121.2 (2)
C5—C6—C12109.67 (17)O2—C13—C9121.8 (2)
C7—C6—C1107.52 (17)C14—C13—C9117.03 (19)
C5—C6—C1107.90 (16)C13—C14—H14A109.5
C12—C6—C1114.38 (18)C13—C14—H14B109.5
C8—C7—C6113.48 (17)H14A—C14—H14B109.5
C8—C7—H7A108.9C13—C14—H14C109.5
C6—C7—H7A108.9H14A—C14—H14C109.5
C8—C7—H7B108.9H14B—C14—H14C109.5
C6—C7—H7B108.9C2—O1—H2113 (2)
D—H···AD—HH···AD···AD—H···A
O1—H2···O2i0.84 (3)2.05 (3)2.883 (2)169 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H2⋯O2i0.84 (3)2.05 (3)2.883 (2)169 (3)

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure of Cyperanic Acid, a New Sesquiterpene from Dittrichia viscosa.

Authors:  P Ceccherelli; M Curini; M C Marcotullio; A Menghini
Journal:  J Nat Prod       Date:  1988-09       Impact factor: 4.050

3.  [Helenine and santonine, the 12-carboxy-eudesma-3,11(13) diene].

Authors:  P Azoulay; J P Reynier; G Balansard; M Gasquet; P Timon-David
Journal:  Pharm Acta Helv       Date:  1986

4.  Flavonoids from Dittrichia viscosa.

Authors:  I Chiappini; G Fardella; A Menghini; C Rossi
Journal:  Planta Med       Date:  1982-03       Impact factor: 3.352

5.  12-carboxyeudesma-3,11(13)-diene. A novel sesquiterpenic acid with a narrow antifungal spectrum.

Authors:  G Shtacher; Y Kashman
Journal:  J Med Chem       Date:  1970-11       Impact factor: 7.446

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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