| Literature DB >> 21522345 |
Sanghun Cheon1, Tae Ho Kim, Ki-Min Park, Jineun Kim.
Abstract
In the title compound, C(7)H(14)NO(5)P, theEntities:
Year: 2011 PMID: 21522345 PMCID: PMC3051939 DOI: 10.1107/S1600536811003898
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H14NO5P | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 9925 reflections |
| θ = 2.4–28.3° | |
| µ = 0.25 mm−1 | |
| β = 115.377 (1)° | Block, colourless |
| 0.35 × 0.35 × 0.25 mm | |
| Bruker APEXII CCD diffractometer | 2673 independent reflections |
| Radiation source: fine-focus sealed tube | 2411 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 17626 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2673 reflections | (Δ/σ)max < 0.001 |
| 155 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.38 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| P1 | 0.72597 (4) | 0.12670 (3) | 0.30753 (4) | 0.02990 (14) | |
| O1 | 0.87089 (17) | 0.17794 (17) | 0.35222 (16) | 0.0442 (4) | 0.833 (2) |
| O2 | 0.60357 (16) | 0.22189 (12) | 0.25429 (17) | 0.0421 (4) | 0.833 (2) |
| O3 | 0.69477 (16) | 0.05711 (13) | 0.41970 (14) | 0.0404 (4) | 0.833 (2) |
| O1' | 0.8042 (9) | 0.2366 (7) | 0.2975 (8) | 0.0385 (17) | 0.167 (2) |
| O2' | 0.5877 (7) | 0.1471 (7) | 0.3323 (7) | 0.0414 (18) | 0.167 (2) |
| O3' | 0.8319 (8) | 0.0599 (7) | 0.4465 (7) | 0.0446 (19) | 0.167 (2) |
| O4 | 0.68546 (12) | 0.03323 (9) | 0.18490 (11) | 0.0319 (2) | |
| O5 | 0.75176 (15) | 0.08602 (13) | −0.19560 (13) | 0.0486 (3) | |
| N1 | 0.55391 (16) | 0.20368 (14) | −0.26018 (15) | 0.0423 (3) | |
| H1N | 0.4883 | 0.2357 | −0.2360 | 0.051* | |
| C1 | 0.44938 (19) | 0.19657 (18) | 0.2069 (2) | 0.0494 (4) | |
| H1A | 0.3929 | 0.2700 | 0.1787 | 0.074* | 0.833 (2) |
| H1B | 0.4335 | 0.1597 | 0.2840 | 0.074* | 0.833 (2) |
| H1C | 0.4168 | 0.1428 | 0.1259 | 0.074* | 0.833 (2) |
| H1D | 0.3692 | 0.2054 | 0.2359 | 0.074* | 0.167 (2) |
| H1E | 0.4189 | 0.1421 | 0.1267 | 0.074* | 0.167 (2) |
| H1F | 0.4726 | 0.2735 | 0.1790 | 0.074* | 0.167 (2) |
| C2 | 0.7899 (3) | −0.0384 (2) | 0.4980 (2) | 0.0655 (6) | |
| H2A | 0.7542 | −0.0715 | 0.5641 | 0.098* | 0.833 (2) |
| H2B | 0.8904 | −0.0087 | 0.5510 | 0.098* | 0.833 (2) |
| H2C | 0.7898 | −0.0998 | 0.4321 | 0.098* | 0.833 (2) |
| H2D | 0.8730 | −0.0660 | 0.5840 | 0.098* | 0.167 (2) |
| H2E | 0.7597 | −0.1009 | 0.4265 | 0.098* | 0.167 (2) |
| H2F | 0.7073 | −0.0181 | 0.5201 | 0.098* | 0.167 (2) |
| C3 | 0.72637 (16) | 0.04930 (12) | 0.07257 (14) | 0.0284 (3) | |
| C4 | 0.86253 (19) | −0.01539 (16) | 0.09550 (19) | 0.0442 (4) | |
| H4A | 0.8863 | −0.0020 | 0.0151 | 0.066* | |
| H4B | 0.8477 | −0.0998 | 0.1041 | 0.066* | |
| H4C | 0.9438 | 0.0128 | 0.1825 | 0.066* | |
| C5 | 0.63716 (16) | 0.11200 (13) | −0.03706 (15) | 0.0298 (3) | |
| H5A | 0.5546 | 0.1478 | −0.0310 | 0.036* | |
| C6 | 0.65555 (17) | 0.13105 (13) | −0.16923 (16) | 0.0324 (3) | |
| C7 | 0.5494 (3) | 0.2307 (3) | −0.3968 (2) | 0.0675 (7) | |
| H7A | 0.4682 | 0.2854 | −0.4472 | 0.101* | |
| H7B | 0.5341 | 0.1580 | −0.4518 | 0.101* | |
| H7C | 0.6427 | 0.2670 | −0.3841 | 0.101* |
| P1 | 0.0279 (2) | 0.0352 (2) | 0.0273 (2) | −0.00341 (13) | 0.01246 (16) | −0.00360 (13) |
| O1 | 0.0347 (8) | 0.0594 (11) | 0.0381 (8) | −0.0165 (8) | 0.0151 (6) | −0.0108 (7) |
| O2 | 0.0392 (8) | 0.0322 (7) | 0.0528 (8) | 0.0013 (5) | 0.0176 (6) | −0.0072 (6) |
| O3 | 0.0375 (8) | 0.0562 (9) | 0.0320 (7) | 0.0005 (6) | 0.0194 (6) | 0.0036 (6) |
| O1' | 0.045 (4) | 0.034 (4) | 0.044 (4) | −0.014 (3) | 0.027 (4) | −0.011 (3) |
| O2' | 0.027 (3) | 0.062 (4) | 0.039 (4) | 0.006 (3) | 0.019 (3) | −0.006 (3) |
| O3' | 0.038 (4) | 0.053 (4) | 0.031 (3) | −0.004 (3) | 0.004 (3) | 0.005 (3) |
| O4 | 0.0373 (6) | 0.0325 (5) | 0.0290 (5) | −0.0056 (4) | 0.0172 (4) | −0.0023 (4) |
| O5 | 0.0465 (7) | 0.0676 (8) | 0.0418 (7) | 0.0217 (6) | 0.0284 (6) | 0.0121 (6) |
| N1 | 0.0413 (7) | 0.0568 (8) | 0.0342 (7) | 0.0167 (6) | 0.0214 (6) | 0.0118 (6) |
| C1 | 0.0347 (8) | 0.0538 (10) | 0.0550 (11) | 0.0079 (7) | 0.0149 (7) | −0.0083 (8) |
| C2 | 0.0593 (13) | 0.0810 (15) | 0.0554 (12) | 0.0133 (11) | 0.0237 (10) | 0.0319 (11) |
| C3 | 0.0318 (7) | 0.0271 (6) | 0.0287 (6) | −0.0031 (5) | 0.0152 (5) | −0.0037 (5) |
| C4 | 0.0429 (9) | 0.0498 (9) | 0.0429 (9) | 0.0172 (7) | 0.0214 (7) | 0.0102 (7) |
| C5 | 0.0287 (7) | 0.0333 (7) | 0.0305 (7) | 0.0020 (5) | 0.0156 (6) | −0.0014 (5) |
| C6 | 0.0318 (7) | 0.0369 (7) | 0.0298 (7) | 0.0020 (5) | 0.0147 (6) | 0.0005 (5) |
| C7 | 0.0618 (13) | 0.1063 (19) | 0.0439 (10) | 0.0368 (13) | 0.0317 (10) | 0.0331 (11) |
| P1—O1 | 1.4472 (14) | C1—H1D | 0.9800 |
| P1—O1' | 1.501 (7) | C1—H1E | 0.9800 |
| P1—O2' | 1.536 (6) | C1—H1F | 0.9800 |
| P1—O2 | 1.5503 (14) | C2—H2A | 0.9800 |
| P1—O3 | 1.5536 (13) | C2—H2B | 0.9800 |
| P1—O4 | 1.5775 (11) | C2—H2C | 0.9800 |
| P1—O3' | 1.580 (7) | C2—H2D | 0.9800 |
| O2—C1 | 1.439 (2) | C2—H2E | 0.9800 |
| O3—C2 | 1.446 (2) | C2—H2F | 0.9800 |
| O2'—C1 | 1.551 (7) | C3—C5 | 1.321 (2) |
| O3'—C2 | 1.382 (8) | C3—C4 | 1.479 (2) |
| O4—C3 | 1.4130 (16) | C4—H4A | 0.9800 |
| O5—C6 | 1.2250 (19) | C4—H4B | 0.9800 |
| N1—C6 | 1.340 (2) | C4—H4C | 0.9800 |
| N1—C7 | 1.442 (2) | C5—C6 | 1.487 (2) |
| N1—H1N | 0.8800 | C5—H5A | 0.9500 |
| C1—H1A | 0.9800 | C7—H7A | 0.9800 |
| C1—H1B | 0.9800 | C7—H7B | 0.9800 |
| C1—H1C | 0.9800 | C7—H7C | 0.9800 |
| O1—P1—O1' | 37.3 (3) | H1B—C1—H1F | 140.3 |
| O1—P1—O2' | 138.0 (3) | H1C—C1—H1F | 109.3 |
| O1'—P1—O2' | 115.2 (4) | H1D—C1—H1F | 109.5 |
| O1—P1—O2 | 111.70 (10) | H1E—C1—H1F | 109.5 |
| O1'—P1—O2 | 75.8 (3) | O3'—C2—O3 | 54.0 (3) |
| O2'—P1—O2 | 47.1 (3) | O3'—C2—H2A | 148.2 |
| O1—P1—O3 | 117.47 (9) | O3—C2—H2A | 109.5 |
| O1'—P1—O3 | 139.1 (3) | O3'—C2—H2B | 61.9 |
| O2'—P1—O3 | 57.3 (3) | O3—C2—H2B | 109.5 |
| O2—P1—O3 | 103.86 (8) | H2A—C2—H2B | 109.5 |
| O1—P1—O4 | 113.96 (8) | O3'—C2—H2C | 102.0 |
| O1'—P1—O4 | 117.5 (3) | O3—C2—H2C | 109.5 |
| O2'—P1—O4 | 107.5 (3) | H2A—C2—H2C | 109.5 |
| O2—P1—O4 | 106.74 (7) | H2B—C2—H2C | 109.5 |
| O3—P1—O4 | 101.93 (7) | O3'—C2—H2D | 109.5 |
| O1—P1—O3' | 73.0 (3) | O3—C2—H2D | 148.9 |
| O1'—P1—O3' | 107.2 (4) | H2A—C2—H2D | 69.9 |
| O2'—P1—O3' | 102.6 (4) | H2B—C2—H2D | 47.5 |
| O2—P1—O3' | 141.6 (3) | H2C—C2—H2D | 99.4 |
| O3—P1—O3' | 48.4 (3) | O3'—C2—H2E | 109.5 |
| O4—P1—O3' | 105.2 (3) | O3—C2—H2E | 101.3 |
| C1—O2—P1 | 123.79 (13) | H2A—C2—H2E | 100.0 |
| C2—O3—P1 | 120.71 (13) | H2B—C2—H2E | 126.0 |
| P1—O2'—C1 | 117.4 (5) | H2C—C2—H2E | 16.6 |
| C2—O3'—P1 | 123.3 (5) | H2D—C2—H2E | 109.5 |
| C3—O4—P1 | 121.57 (9) | O3'—C2—H2F | 109.5 |
| C6—N1—C7 | 121.65 (15) | O3—C2—H2F | 62.3 |
| C6—N1—H1N | 119.2 | H2A—C2—H2F | 47.2 |
| C7—N1—H1N | 119.2 | H2B—C2—H2F | 123.9 |
| O2—C1—O2' | 48.6 (3) | H2C—C2—H2F | 126.0 |
| O2—C1—H1A | 109.5 | H2D—C2—H2F | 109.5 |
| O2'—C1—H1A | 139.2 | H2E—C2—H2F | 109.5 |
| O2—C1—H1B | 109.5 | C5—C3—O4 | 117.41 (13) |
| O2'—C1—H1B | 63.5 | C5—C3—C4 | 130.16 (14) |
| H1A—C1—H1B | 109.5 | O4—C3—C4 | 112.32 (12) |
| O2—C1—H1C | 109.5 | C3—C4—H4A | 109.5 |
| O2'—C1—H1C | 110.6 | C3—C4—H4B | 109.5 |
| H1A—C1—H1C | 109.5 | H4A—C4—H4B | 109.5 |
| H1B—C1—H1C | 109.5 | C3—C4—H4C | 109.5 |
| O2—C1—H1D | 141.2 | H4A—C4—H4C | 109.5 |
| O2'—C1—H1D | 109.5 | H4B—C4—H4C | 109.5 |
| H1A—C1—H1D | 63.8 | C3—C5—C6 | 125.23 (13) |
| H1B—C1—H1D | 49.0 | C3—C5—H5A | 117.4 |
| H1C—C1—H1D | 108.5 | C6—C5—H5A | 117.4 |
| O2—C1—H1E | 108.4 | O5—C6—N1 | 122.15 (15) |
| O2'—C1—H1E | 109.5 | O5—C6—C5 | 124.98 (14) |
| H1A—C1—H1E | 110.5 | N1—C6—C5 | 112.87 (13) |
| H1B—C1—H1E | 109.5 | N1—C7—H7A | 109.5 |
| H1C—C1—H1E | 1.2 | N1—C7—H7B | 109.5 |
| H1D—C1—H1E | 109.5 | H7A—C7—H7B | 109.5 |
| O2—C1—H1F | 64.3 | N1—C7—H7C | 109.5 |
| O2'—C1—H1F | 109.5 | H7A—C7—H7C | 109.5 |
| H1A—C1—H1F | 48.2 | H7B—C7—H7C | 109.5 |
| O1—P1—O2—C1 | −178.29 (15) | O2—P1—O3'—C2 | 84.0 (7) |
| O1'—P1—O2—C1 | 171.5 (3) | O3—P1—O3'—C2 | 31.1 (4) |
| O2'—P1—O2—C1 | −42.1 (4) | O4—P1—O3'—C2 | −61.4 (6) |
| O3—P1—O2—C1 | −50.73 (17) | O1—P1—O4—C3 | −38.76 (15) |
| O4—P1—O2—C1 | 56.53 (16) | O1'—P1—O4—C3 | 2.6 (4) |
| O3'—P1—O2—C1 | −88.6 (5) | O2'—P1—O4—C3 | 134.5 (3) |
| O1—P1—O3—C2 | −54.1 (2) | O2—P1—O4—C3 | 85.04 (12) |
| O1'—P1—O3—C2 | −93.8 (5) | O3—P1—O4—C3 | −166.34 (11) |
| O2'—P1—O3—C2 | 174.5 (4) | O3'—P1—O4—C3 | −116.6 (3) |
| O2—P1—O3—C2 | −178.02 (16) | P1—O2—C1—O2' | 40.5 (4) |
| O4—P1—O3—C2 | 71.16 (17) | P1—O2'—C1—O2 | −37.8 (3) |
| O3'—P1—O3—C2 | −28.7 (4) | P1—O3'—C2—O3 | −30.9 (4) |
| O1—P1—O2'—C1 | 109.6 (5) | P1—O3—C2—O3' | 30.5 (4) |
| O1'—P1—O2'—C1 | 71.9 (6) | P1—O4—C3—C5 | −85.84 (15) |
| O2—P1—O2'—C1 | 35.6 (3) | P1—O4—C3—C4 | 97.63 (14) |
| O3—P1—O2'—C1 | −154.4 (7) | O4—C3—C5—C6 | −175.23 (13) |
| O4—P1—O2'—C1 | −61.2 (6) | C4—C3—C5—C6 | 0.6 (3) |
| O3'—P1—O2'—C1 | −171.9 (5) | C7—N1—C6—O5 | 1.7 (3) |
| O1—P1—O3'—C2 | −172.4 (7) | C7—N1—C6—C5 | −177.96 (19) |
| O1'—P1—O3'—C2 | 172.7 (6) | C3—C5—C6—O5 | 3.9 (3) |
| O2'—P1—O3'—C2 | 51.0 (7) | C3—C5—C6—N1 | −176.46 (15) |
| H··· | ||||
| N1—H1N···O1i | 0.88 | 2.03 | 2.902 (2) | 169 |
| C4—H4B···O2ii | 0.98 | 2.43 | 3.319 (2) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.88 | 2.03 | 2.902 (2) | 169 |
| C4—H4 | 0.98 | 2.43 | 3.319 (2) | 151 |
Symmetry codes: (i) ; (ii) .