Literature DB >> 21522320

3-(2,4-Difluoro-anilino)-9-nitro-dibenzo[b,e]oxepin-11(6H)-one.

Benjamin Baur, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the title compound, C(20)H(12)F(2)N(2)O(4), the two benzene rings of the tricyclic unit are oriented at a dihedral angle of 30.6 (1)°. The 2,4-difluoro-anilino residue is oriented at a dihedral angle of 68.2 (1)° with respect to the phen-oxy ring. In the crystal, N-H⋯O hydrogen bonds between the amino group and the carbonyl O atom of the oxepinone ring link the mol-ecules into infinte chains along the c axis.

Entities:  

Year:  2011        PMID: 21522320      PMCID: PMC3052073          DOI: 10.1107/S1600536811002881

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For palladium-catalysed amination reactions of n class="Chemical">aryl halides with anilines, see: Jensen et al. (2004 ▶). For p38 MAP kinase inhibitors based on dibenzo[b,e]oxepin-11(6H)-one, see: Laufer et al. (2006 ▶).

Experimental

Crystal data

C20H12F2N2O4 M = 382.32 Orthorhombic, a = 27.0813 (15) Å b = 13.0411 (8) Å c = 4.5998 (2) Å V = 1624.51 (15) Å3 Z = 4 Cu Kα radiation μ = 1.08 mm−1 T = 193 K 0.47 × 0.24 × 0.12 mm

Data collection

Enraf–Nonius n class="Gene">CAD-4 diffractometer Absorption correction: numerical (CORINC; Dräger & Gattow, 1971 ▶) T min = 0.721, T max = 0.882 3417 measured reflections 3010 independent reflections 2924 reflections with I > 2σ(I) R int = 0.051 3 standard reflections every 60 min intensity decay: 3%

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.127 S = 1.03 3010 reflections 253 parameters 1 restraint H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack, (1983 ▶), 1270 Friedel pairs Flack parameter: −0.22 (18) Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811002881/im2261sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002881/im2261Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H12F2N2O4F(000) = 784
Mr = 382.32Dx = 1.563 Mg m3
Orthorhombic, Pna21Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2c -2nCell parameters from 25 reflections
a = 27.0813 (15) Åθ = 65–69°
b = 13.0411 (8) ŵ = 1.08 mm1
c = 4.5998 (2) ÅT = 193 K
V = 1624.51 (15) Å3Needle, yellow
Z = 40.47 × 0.24 × 0.12 mm
Enraf–Nonius CAD-4 diffractometer2924 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.051
graphiteθmax = 69.8°, θmin = 3.3°
ω/2θ scansh = −33→33
Absorption correction: numerical (CORINC; Dräger & Gattow, 1971)k = −15→15
Tmin = 0.721, Tmax = 0.882l = −5→5
3417 measured reflections3 standard reflections every 60 min
3010 independent reflections intensity decay: 3%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.127w = 1/[σ2(Fo2) + (0.0989P)2 + 0.3414P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.023
3010 reflectionsΔρmax = 0.17 e Å3
253 parametersΔρmin = −0.20 e Å3
1 restraintAbsolute structure: Flack, (1983), 1270 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.22 (18)
Experimental. 1H NMR (200 MHz, DMSO-d~6~) δ in p.p.m. 5.32 (s, 2 H), 6.26 (m, 1 H), 6.65 (dd, J=8.65, 1.96 Hz, 1 H), 7.11 (m, 1 H), 7.39 (m, 2 H), 7.82 (m, 1 H), 8.02 (d, J=8.97 Hz, 1 H), 8.41 (dd, J=8.21, 2.53 Hz, 1 H), 8.52 (d, J=2.40 Hz, 1 H), 8.85 (s, NH,1 H).13C NMR (50 MHz, DMSO-d~6~) δ in p.p.m. 72.5, 102.1, 110.5, 116.5, 124.3, 127.0, 130.4, 134.1, 141.1, 142.9, 148.3, 152.9, 163.4, 185.1, C—F not detected.GC/MS, m/z (%) 382 (100, M+), 308 (12), 152 (9), 98 (7), 63 (1).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.58864 (5)0.24963 (11)0.3890 (3)0.0240 (3)
C20.56177 (7)0.30020 (15)0.5965 (4)0.0215 (4)
C30.51656 (8)0.25513 (16)0.6587 (5)0.0242 (4)
H30.50680.19470.55870.029*
C40.48548 (8)0.29789 (17)0.8665 (5)0.0245 (4)
C50.50161 (8)0.38484 (16)1.0212 (5)0.0242 (4)
H50.48180.41231.17280.029*
C60.54556 (8)0.42947 (15)0.9536 (5)0.0234 (4)
H60.55560.48821.06050.028*
C70.57698 (7)0.39218 (15)0.7306 (4)0.0216 (4)
C80.61655 (7)0.46277 (15)0.6377 (4)0.0222 (4)
C90.65513 (7)0.43587 (15)0.4150 (5)0.0215 (4)
C100.68194 (8)0.51865 (17)0.3032 (5)0.0248 (4)
H100.67520.58650.36700.030*
C110.71823 (7)0.50081 (16)0.0997 (5)0.0262 (5)
C120.73012 (8)0.40368 (18)0.0000 (5)0.0275 (5)
H120.75510.3936−0.14230.033*
C130.70420 (7)0.32175 (17)0.1161 (5)0.0253 (5)
H130.71200.25410.05500.030*
C140.66696 (7)0.33663 (16)0.3204 (5)0.0223 (4)
C150.64067 (7)0.24498 (15)0.4420 (5)0.0253 (5)
H15A0.65420.18200.35250.030*
H15B0.64660.24120.65410.030*
N160.43947 (7)0.25975 (16)0.9317 (5)0.0341 (5)
H160.41910.30401.04350.041*
C170.41597 (8)0.18098 (18)0.7713 (5)0.0287 (5)
C180.37502 (8)0.20134 (19)0.5998 (6)0.0352 (5)
H180.36310.26970.58600.042*
C190.35112 (10)0.1240 (2)0.4481 (7)0.0434 (6)
H190.32260.13810.33450.052*
C200.36991 (10)0.0266 (2)0.4670 (6)0.0407 (6)
C210.41046 (10)0.00166 (19)0.6308 (7)0.0409 (6)
H210.4229−0.06640.63840.049*
C220.43238 (9)0.0805 (2)0.7842 (6)0.0355 (6)
F230.34769 (7)−0.04940 (15)0.3148 (5)0.0629 (6)
F240.47133 (6)0.05902 (13)0.9539 (5)0.0558 (5)
O250.61751 (6)0.55042 (11)0.7364 (4)0.0302 (4)
N260.74461 (7)0.58919 (15)−0.0221 (5)0.0315 (4)
O270.73855 (7)0.67347 (14)0.0898 (5)0.0476 (5)
O280.77170 (7)0.57374 (15)−0.2321 (5)0.0434 (5)
U11U22U33U12U13U23
O10.0251 (7)0.0263 (7)0.0205 (8)−0.0019 (5)0.0021 (6)−0.0047 (6)
C20.0275 (9)0.0227 (10)0.0143 (9)0.0030 (7)−0.0011 (8)0.0020 (8)
C30.0306 (10)0.0249 (10)0.0171 (10)−0.0024 (8)−0.0015 (9)−0.0011 (8)
C40.0270 (10)0.0287 (10)0.0179 (11)−0.0006 (8)0.0009 (8)0.0029 (8)
C50.0303 (10)0.0286 (11)0.0137 (10)0.0044 (8)0.0011 (8)0.0012 (8)
C60.0327 (10)0.0243 (9)0.0132 (10)0.0013 (8)−0.0043 (8)0.0005 (8)
C70.0253 (9)0.0251 (10)0.0142 (10)0.0013 (8)−0.0036 (8)0.0021 (8)
C80.0271 (9)0.0210 (9)0.0184 (10)0.0019 (7)−0.0060 (8)0.0015 (8)
C90.0230 (9)0.0245 (9)0.0170 (10)−0.0001 (8)−0.0063 (8)0.0033 (8)
C100.0283 (10)0.0227 (9)0.0234 (11)−0.0015 (8)−0.0083 (9)0.0037 (8)
C110.0246 (9)0.0300 (11)0.0239 (11)−0.0059 (8)−0.0052 (8)0.0067 (9)
C120.0252 (9)0.0333 (11)0.0239 (11)−0.0003 (8)−0.0023 (9)0.0038 (9)
C130.0256 (9)0.0261 (10)0.0241 (11)0.0017 (8)−0.0032 (9)0.0014 (8)
C140.0218 (9)0.0249 (10)0.0201 (10)0.0013 (7)−0.0055 (8)0.0019 (8)
C150.0266 (10)0.0220 (10)0.0275 (11)0.0005 (7)0.0022 (9)0.0028 (9)
N160.0318 (9)0.0404 (11)0.0301 (11)−0.0050 (8)0.0088 (9)−0.0101 (9)
C170.0274 (10)0.0336 (11)0.0250 (12)−0.0039 (8)0.0078 (9)−0.0015 (9)
C180.0338 (11)0.0355 (13)0.0363 (14)0.0036 (9)0.0046 (10)−0.0016 (11)
C190.0371 (12)0.0532 (15)0.0400 (16)−0.0028 (11)−0.0025 (12)−0.0075 (13)
C200.0447 (14)0.0424 (13)0.0349 (15)−0.0147 (11)0.0132 (11)−0.0110 (11)
C210.0444 (12)0.0287 (12)0.0495 (16)−0.0035 (10)0.0142 (12)0.0015 (12)
C220.0309 (11)0.0381 (12)0.0373 (14)−0.0009 (9)0.0052 (11)0.0077 (11)
F230.0677 (11)0.0604 (11)0.0606 (12)−0.0257 (9)0.0120 (10)−0.0305 (10)
F240.0483 (9)0.0541 (10)0.0649 (12)0.0051 (7)−0.0134 (9)0.0171 (9)
O250.0352 (8)0.0244 (8)0.0311 (9)−0.0034 (6)0.0017 (7)−0.0047 (7)
N260.0312 (9)0.0318 (10)0.0314 (11)−0.0070 (8)−0.0010 (9)0.0060 (9)
O270.0584 (11)0.0300 (9)0.0545 (13)−0.0103 (8)0.0147 (10)0.0022 (8)
O280.0460 (9)0.0441 (10)0.0402 (11)−0.0120 (8)0.0137 (9)0.0031 (9)
O1—C21.370 (2)C12—H120.9500
O1—C151.431 (3)C13—C141.392 (3)
C2—C31.388 (3)C13—H130.9500
C2—C71.410 (3)C14—C151.499 (3)
C3—C41.390 (3)C15—H15A0.9900
C3—H30.9500C15—H15B0.9900
C4—N161.375 (3)N16—C171.416 (3)
C4—C51.408 (3)N16—H160.9504
C5—C61.361 (3)C17—C181.387 (3)
C5—H50.9500C17—C221.385 (3)
C6—C71.419 (3)C18—C191.387 (4)
C6—H60.9500C18—H180.9500
C7—C81.476 (3)C19—C201.371 (4)
C8—O251.230 (3)C19—H190.9500
C8—C91.504 (3)C20—F231.355 (3)
C9—C101.399 (3)C20—C211.371 (4)
C9—C141.403 (3)C21—C221.381 (4)
C10—C111.377 (3)C21—H210.9500
C10—H100.9500C22—F241.341 (3)
C11—C121.385 (3)N26—O271.225 (3)
C11—N261.467 (3)N26—O281.230 (3)
C12—C131.385 (3)
C2—O1—C15115.13 (16)C12—C13—H13119.3
O1—C2—C3114.11 (19)C14—C13—H13119.3
O1—C2—C7123.99 (18)C13—C14—C9120.24 (19)
C3—C2—C7121.85 (19)C13—C14—C15119.00 (19)
C2—C3—C4120.4 (2)C9—C14—C15120.75 (19)
C2—C3—H3119.8O1—C15—C14111.72 (16)
C4—C3—H3119.8O1—C15—H15A109.3
N16—C4—C3123.6 (2)C14—C15—H15A109.3
N16—C4—C5117.53 (19)O1—C15—H15B109.3
C3—C4—C5118.85 (19)C14—C15—H15B109.3
C6—C5—C4120.02 (19)H15A—C15—H15B107.9
C6—C5—H5120.0C4—N16—C17123.8 (2)
C4—C5—H5120.0C4—N16—H16115.2
C5—C6—C7122.89 (19)C17—N16—H16117.5
C5—C6—H6118.6C18—C17—C22117.5 (2)
C7—C6—H6118.6C18—C17—N16121.1 (2)
C2—C7—C6115.63 (18)C22—C17—N16121.3 (2)
C2—C7—C8128.01 (18)C17—C18—C19121.4 (2)
C6—C7—C8115.54 (18)C17—C18—H18119.3
O25—C8—C7119.20 (19)C19—C18—H18119.3
O25—C8—C9116.95 (18)C20—C19—C18117.9 (2)
C7—C8—C9123.78 (18)C20—C19—H19121.0
C10—C9—C14118.6 (2)C18—C19—H19121.0
C10—C9—C8115.52 (18)F23—C20—C19118.7 (3)
C14—C9—C8125.81 (18)F23—C20—C21117.8 (3)
C11—C10—C9119.3 (2)C19—C20—C21123.5 (2)
C11—C10—H10120.3C20—C21—C22116.6 (2)
C9—C10—H10120.3C20—C21—H21121.7
C10—C11—C12123.1 (2)C22—C21—H21121.7
C10—C11—N26118.3 (2)F24—C22—C21118.7 (2)
C12—C11—N26118.6 (2)F24—C22—C17118.3 (2)
C11—C12—C13117.4 (2)C21—C22—C17123.0 (2)
C11—C12—H12121.3O27—N26—O28123.8 (2)
C13—C12—H12121.3O27—N26—C11118.7 (2)
C12—C13—C14121.3 (2)O28—N26—C11117.5 (2)
C15—O1—C2—C3−140.97 (18)C12—C13—C14—C9−0.5 (3)
C15—O1—C2—C741.3 (3)C12—C13—C14—C15−179.1 (2)
O1—C2—C3—C4179.62 (18)C10—C9—C14—C13−0.9 (3)
C7—C2—C3—C4−2.6 (3)C8—C9—C14—C13−178.83 (19)
C2—C3—C4—N16177.5 (2)C10—C9—C14—C15177.64 (19)
C2—C3—C4—C5−2.8 (3)C8—C9—C14—C15−0.3 (3)
N16—C4—C5—C6−176.1 (2)C2—O1—C15—C14−88.1 (2)
C3—C4—C5—C64.2 (3)C13—C14—C15—O1−121.5 (2)
C4—C5—C6—C7−0.2 (3)C9—C14—C15—O159.9 (3)
O1—C2—C7—C6−176.19 (18)C3—C4—N16—C17−8.2 (4)
C3—C2—C7—C66.3 (3)C5—C4—N16—C17172.1 (2)
O1—C2—C7—C814.7 (3)C4—N16—C17—C18−110.1 (3)
C3—C2—C7—C8−162.8 (2)C4—N16—C17—C2271.2 (3)
C5—C6—C7—C2−4.9 (3)C22—C17—C18—C190.4 (4)
C5—C6—C7—C8165.57 (19)N16—C17—C18—C19−178.4 (2)
C2—C7—C8—O25162.9 (2)C17—C18—C19—C20−1.5 (4)
C6—C7—C8—O25−6.2 (3)C18—C19—C20—F23−178.5 (2)
C2—C7—C8—C9−14.0 (3)C18—C19—C20—C211.0 (4)
C6—C7—C8—C9176.95 (17)F23—C20—C21—C22−179.9 (2)
O25—C8—C9—C10−11.8 (3)C19—C20—C21—C220.6 (4)
C7—C8—C9—C10165.16 (18)C20—C21—C22—F24178.1 (2)
O25—C8—C9—C14166.2 (2)C20—C21—C22—C17−1.8 (4)
C7—C8—C9—C14−16.9 (3)C18—C17—C22—F24−178.6 (2)
C14—C9—C10—C111.4 (3)N16—C17—C22—F240.1 (3)
C8—C9—C10—C11179.54 (17)C18—C17—C22—C211.3 (4)
C9—C10—C11—C12−0.6 (3)N16—C17—C22—C21−179.9 (2)
C9—C10—C11—N26177.82 (18)C10—C11—N26—O2710.3 (3)
C10—C11—C12—C13−0.8 (3)C12—C11—N26—O27−171.3 (2)
N26—C11—C12—C13−179.2 (2)C10—C11—N26—O28−169.8 (2)
C11—C12—C13—C141.3 (3)C12—C11—N26—O288.7 (3)
D—H···AD—HH···AD···AD—H···A
N16—H16···O25i0.952.323.236 (3)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N16—H16⋯O25i0.952.323.236 (3)162

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Design, synthesis, and biological evaluation of phenylamino-substituted 6,11-dihydro-dibenzo[b,e]oxepin-11-ones and dibenzo[a,d]cycloheptan-5-ones: novel p38 MAP kinase inhibitors.

Authors:  Stefan A Laufer; Gabriele M Ahrens; Solveigh C Karcher; Jörg S Hering; Raimund Niess
Journal:  J Med Chem       Date:  2006-12-28       Impact factor: 7.446

3.  Rapid and efficient microwave-assisted synthesis of aryl aminobenzophenones using Pd-catalyzed amination.

Authors:  Thomas A Jensen; Xifu Liang; David Tanner; Niels Skjaerbaek
Journal:  J Org Chem       Date:  2004-07-23       Impact factor: 4.354

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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