| Literature DB >> 21522312 |
Zeynep Keleşoğlu, Zeynep Gültekin, Orhan Büyükgüngör.
Abstract
In the title compound, C(16)H(17)NO(5), the six-membered N-containing ring has a half-boat form; the spiro C atom deviates by 0.34 (2) Å from the plane (r.m.s. deviation = 0.051 Å) defined by the N and four aromatic C atoms. Intra-molecular N-H⋯O hydrogen bonding generates an S(6) ring motif and the dihedral angle between the mean plane though the S(6) ring and that through the five-atom half-boat plane is 3.39 (2)°. In the crystal, weak inter-molecular C-H⋯O hydrogen bonds link mol-ecules into zigzag chains along [001] due to c-glide symmetry, and C-H⋯π inter-actions extend along [010].Entities:
Year: 2011 PMID: 21522312 PMCID: PMC3052105 DOI: 10.1107/S1600536811003564
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H17NO5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 14613 reflections |
| θ = 2.0–28.0° | |
| µ = 0.10 mm−1 | |
| β = 101.042 (3)° | Prism, brown |
| 0.74 × 0.43 × 0.23 mm | |
| Stoe IPDS 2 diffractometer | 3068 independent reflections |
| Radiation source: fine-focus sealed tube | 2221 reflections with |
| graphite | |
| rotation method scans | θmax = 26.5°, θmin = 2.2° |
| Absorption correction: integration ( | |
| 14613 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 14613 reflections | (Δ/σ)max < 0.001 |
| 205 parameters | Δρmax = 0.43 e Å−3 |
| 1 restraint | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4104 (2) | 0.37012 (12) | 0.3615 (2) | 0.0427 (5) | |
| C2 | 0.5203 (3) | 0.39441 (12) | 0.4782 (2) | 0.0458 (5) | |
| C3 | 0.4559 (3) | 0.39964 (14) | 0.5939 (2) | 0.0537 (6) | |
| H3 | 0.5267 | 0.4161 | 0.6702 | 0.064* | |
| C4 | 0.2911 (3) | 0.38117 (16) | 0.5987 (2) | 0.0582 (6) | |
| H4 | 0.2512 | 0.3853 | 0.6771 | 0.070* | |
| C5 | 0.1846 (3) | 0.35628 (15) | 0.4853 (2) | 0.0529 (6) | |
| H5 | 0.0732 | 0.3436 | 0.4887 | 0.064* | |
| C6 | 0.2403 (2) | 0.34998 (13) | 0.3675 (2) | 0.0436 (5) | |
| C7 | 0.6980 (3) | 0.41517 (14) | 0.4779 (2) | 0.0507 (6) | |
| C8 | 0.8065 (3) | 0.44802 (16) | 0.5984 (3) | 0.0618 (7) | |
| H8A | 0.8402 | 0.4104 | 0.6630 | 0.074* | |
| H8B | 0.7431 | 0.4850 | 0.6341 | 0.074* | |
| H8C | 0.9058 | 0.4697 | 0.5751 | 0.074* | |
| C9 | 0.1341 (2) | 0.32351 (13) | 0.2442 (2) | 0.0454 (5) | |
| C10 | 0.1863 (3) | 0.32944 (14) | 0.1302 (2) | 0.0491 (5) | |
| H10 | 0.1169 | 0.3113 | 0.0547 | 0.059* | |
| C11 | 0.3514 (3) | 0.36395 (13) | 0.1178 (2) | 0.0462 (5) | |
| C12 | −0.0356 (3) | 0.28883 (15) | 0.2385 (2) | 0.0521 (6) | |
| C13 | −0.2120 (3) | 0.21400 (18) | 0.3394 (3) | 0.0732 (8) | |
| H13A | −0.2844 | 0.2489 | 0.3708 | 0.088* | |
| H13B | −0.1979 | 0.1719 | 0.3960 | 0.088* | |
| H13C | −0.2625 | 0.1993 | 0.2515 | 0.088* | |
| C14 | 0.4362 (3) | 0.32316 (16) | 0.0183 (2) | 0.0572 (6) | |
| H14A | 0.5410 | 0.3470 | 0.0119 | 0.069* | |
| H14B | 0.3620 | 0.3234 | −0.0663 | 0.069* | |
| H14C | 0.4588 | 0.2735 | 0.0469 | 0.069* | |
| C15 | 0.3165 (3) | 0.44329 (14) | 0.0688 (2) | 0.0496 (6) | |
| C16 | 0.1661 (4) | 0.51590 (18) | −0.1039 (3) | 0.0788 (9) | |
| H16A | 0.1176 | 0.5463 | −0.0450 | 0.095* | |
| H16B | 0.0861 | 0.5102 | −0.1851 | 0.095* | |
| H16C | 0.2678 | 0.5384 | −0.1211 | 0.095* | |
| N1 | 0.4639 (2) | 0.36371 (12) | 0.24524 (18) | 0.0508 (5) | |
| O1 | 0.7624 (2) | 0.40668 (13) | 0.38037 (19) | 0.0708 (6) | |
| O2 | −0.1528 (2) | 0.29932 (15) | 0.1485 (2) | 0.0906 (8) | |
| O3 | −0.0469 (2) | 0.24724 (11) | 0.33918 (18) | 0.0657 (5) | |
| O4 | 0.3796 (3) | 0.49676 (12) | 0.1243 (2) | 0.0794 (6) | |
| O5 | 0.2062 (2) | 0.44499 (10) | −0.04465 (18) | 0.0641 (5) | |
| H1 | 0.566 (2) | 0.3785 (15) | 0.248 (3) | 0.065 (8)* |
| C1 | 0.0390 (10) | 0.0448 (12) | 0.0419 (11) | 0.0046 (9) | 0.0017 (8) | 0.0007 (9) |
| C2 | 0.0438 (11) | 0.0449 (12) | 0.0450 (12) | 0.0039 (9) | −0.0014 (9) | 0.0003 (10) |
| C3 | 0.0524 (12) | 0.0619 (16) | 0.0425 (12) | −0.0001 (11) | −0.0015 (10) | −0.0073 (11) |
| C4 | 0.0540 (13) | 0.0755 (18) | 0.0454 (13) | 0.0000 (12) | 0.0099 (10) | −0.0068 (12) |
| C5 | 0.0463 (11) | 0.0635 (15) | 0.0486 (13) | 0.0016 (10) | 0.0081 (10) | −0.0037 (11) |
| C6 | 0.0397 (10) | 0.0455 (12) | 0.0431 (12) | 0.0025 (8) | 0.0018 (8) | −0.0009 (9) |
| C7 | 0.0441 (11) | 0.0536 (14) | 0.0507 (14) | 0.0021 (10) | −0.0005 (10) | −0.0018 (11) |
| C8 | 0.0503 (12) | 0.0684 (17) | 0.0611 (16) | −0.0086 (11) | −0.0031 (11) | −0.0069 (13) |
| C9 | 0.0392 (10) | 0.0497 (13) | 0.0446 (12) | 0.0008 (9) | 0.0013 (9) | 0.0021 (10) |
| C10 | 0.0422 (10) | 0.0575 (14) | 0.0440 (12) | −0.0040 (10) | −0.0007 (9) | −0.0034 (10) |
| C11 | 0.0407 (10) | 0.0574 (14) | 0.0391 (11) | −0.0018 (9) | 0.0041 (8) | −0.0030 (10) |
| C12 | 0.0461 (12) | 0.0657 (16) | 0.0424 (12) | −0.0063 (10) | 0.0027 (10) | −0.0011 (11) |
| C13 | 0.0639 (15) | 0.086 (2) | 0.0689 (18) | −0.0292 (15) | 0.0113 (13) | 0.0083 (16) |
| C14 | 0.0509 (12) | 0.0676 (17) | 0.0534 (15) | 0.0019 (11) | 0.0108 (10) | −0.0106 (12) |
| C15 | 0.0463 (11) | 0.0599 (15) | 0.0428 (12) | −0.0056 (10) | 0.0095 (9) | −0.0046 (11) |
| C16 | 0.0801 (19) | 0.077 (2) | 0.074 (2) | 0.0029 (16) | 0.0012 (15) | 0.0221 (17) |
| N1 | 0.0375 (9) | 0.0726 (14) | 0.0405 (10) | −0.0042 (9) | 0.0032 (8) | −0.0029 (9) |
| O1 | 0.0446 (9) | 0.1052 (16) | 0.0605 (11) | −0.0100 (9) | 0.0051 (8) | −0.0129 (11) |
| O2 | 0.0528 (10) | 0.149 (2) | 0.0624 (12) | −0.0263 (11) | −0.0078 (9) | 0.0270 (13) |
| O3 | 0.0573 (9) | 0.0731 (13) | 0.0615 (11) | −0.0174 (8) | −0.0020 (8) | 0.0178 (10) |
| O4 | 0.1003 (15) | 0.0624 (12) | 0.0673 (13) | −0.0137 (11) | −0.0043 (11) | −0.0087 (10) |
| O5 | 0.0648 (10) | 0.0631 (12) | 0.0566 (11) | −0.0039 (8) | −0.0079 (8) | 0.0080 (9) |
| C1—N1 | 1.358 (3) | C10—H10 | 0.9300 |
| C1—C2 | 1.423 (3) | C11—N1 | 1.448 (3) |
| C1—C6 | 1.426 (3) | C11—C14 | 1.531 (3) |
| C2—C3 | 1.395 (3) | C11—C15 | 1.542 (3) |
| C2—C7 | 1.475 (3) | C12—O2 | 1.205 (3) |
| C3—C4 | 1.374 (3) | C12—O3 | 1.306 (3) |
| C3—H3 | 0.9300 | C13—O3 | 1.457 (3) |
| C4—C5 | 1.389 (3) | C13—H13A | 0.9600 |
| C4—H4 | 0.9300 | C13—H13B | 0.9600 |
| C5—C6 | 1.381 (3) | C13—H13C | 0.9600 |
| C5—H5 | 0.9300 | C14—H14A | 0.9600 |
| C6—C9 | 1.474 (3) | C14—H14B | 0.9600 |
| C7—O1 | 1.229 (3) | C14—H14C | 0.9600 |
| C7—C8 | 1.502 (3) | C15—O4 | 1.195 (3) |
| C8—H8A | 0.9600 | C15—O5 | 1.328 (3) |
| C8—H8B | 0.9600 | C16—O5 | 1.442 (3) |
| C8—H8C | 0.9600 | C16—H16A | 0.9600 |
| C9—C10 | 1.330 (3) | C16—H16B | 0.9600 |
| C9—C12 | 1.492 (3) | C16—H16C | 0.9600 |
| C10—C11 | 1.494 (3) | N1—H1 | 0.858 (17) |
| N1—C1—C2 | 121.97 (18) | N1—C11—C14 | 109.33 (18) |
| N1—C1—C6 | 118.91 (19) | C10—C11—C14 | 111.6 (2) |
| C2—C1—C6 | 119.11 (19) | N1—C11—C15 | 110.15 (19) |
| C3—C2—C1 | 118.56 (19) | C10—C11—C15 | 108.43 (18) |
| C3—C2—C7 | 120.1 (2) | C14—C11—C15 | 108.15 (19) |
| C1—C2—C7 | 121.3 (2) | O2—C12—O3 | 123.1 (2) |
| C4—C3—C2 | 122.1 (2) | O2—C12—C9 | 122.3 (2) |
| C4—C3—H3 | 118.9 | O3—C12—C9 | 114.68 (19) |
| C2—C3—H3 | 118.9 | O3—C13—H13A | 109.5 |
| C3—C4—C5 | 119.3 (2) | O3—C13—H13B | 109.5 |
| C3—C4—H4 | 120.3 | H13A—C13—H13B | 109.5 |
| C5—C4—H4 | 120.3 | O3—C13—H13C | 109.5 |
| C6—C5—C4 | 121.5 (2) | H13A—C13—H13C | 109.5 |
| C6—C5—H5 | 119.3 | H13B—C13—H13C | 109.5 |
| C4—C5—H5 | 119.3 | C11—C14—H14A | 109.5 |
| C5—C6—C1 | 119.4 (2) | C11—C14—H14B | 109.5 |
| C5—C6—C9 | 124.05 (19) | H14A—C14—H14B | 109.5 |
| C1—C6—C9 | 116.55 (19) | C11—C14—H14C | 109.5 |
| O1—C7—C2 | 121.9 (2) | H14A—C14—H14C | 109.5 |
| O1—C7—C8 | 117.6 (2) | H14B—C14—H14C | 109.5 |
| C2—C7—C8 | 120.5 (2) | O4—C15—O5 | 123.7 (2) |
| C7—C8—H8A | 109.5 | O4—C15—C11 | 125.1 (2) |
| C7—C8—H8B | 109.5 | O5—C15—C11 | 111.1 (2) |
| H8A—C8—H8B | 109.5 | O5—C16—H16A | 109.5 |
| C7—C8—H8C | 109.5 | O5—C16—H16B | 109.5 |
| H8A—C8—H8C | 109.5 | H16A—C16—H16B | 109.5 |
| H8B—C8—H8C | 109.5 | O5—C16—H16C | 109.5 |
| C10—C9—C6 | 120.85 (19) | H16A—C16—H16C | 109.5 |
| C10—C9—C12 | 116.1 (2) | H16B—C16—H16C | 109.5 |
| C6—C9—C12 | 123.04 (19) | C1—N1—C11 | 124.00 (17) |
| C9—C10—C11 | 123.1 (2) | C1—N1—H1 | 114.2 (19) |
| C9—C10—H10 | 118.5 | C11—N1—H1 | 116.7 (19) |
| C11—C10—H10 | 118.5 | C12—O3—C13 | 116.44 (19) |
| N1—C11—C10 | 109.17 (18) | C15—O5—C16 | 117.0 (2) |
| N1—C1—C2—C3 | 179.9 (2) | C12—C9—C10—C11 | 178.9 (2) |
| C6—C1—C2—C3 | −1.8 (3) | C9—C10—C11—N1 | 20.8 (3) |
| N1—C1—C2—C7 | 1.1 (3) | C9—C10—C11—C14 | 141.8 (2) |
| C6—C1—C2—C7 | 179.3 (2) | C9—C10—C11—C15 | −99.2 (3) |
| C1—C2—C3—C4 | 0.9 (4) | C10—C9—C12—O2 | −37.6 (4) |
| C7—C2—C3—C4 | 179.8 (2) | C6—C9—C12—O2 | 142.5 (3) |
| C2—C3—C4—C5 | 0.2 (4) | C10—C9—C12—O3 | 143.2 (2) |
| C3—C4—C5—C6 | −0.3 (4) | C6—C9—C12—O3 | −36.7 (3) |
| C4—C5—C6—C1 | −0.6 (4) | N1—C11—C15—O4 | 3.5 (3) |
| C4—C5—C6—C9 | 179.6 (2) | C10—C11—C15—O4 | 122.9 (3) |
| N1—C1—C6—C5 | 180.0 (2) | C14—C11—C15—O4 | −115.9 (3) |
| C2—C1—C6—C5 | 1.7 (3) | N1—C11—C15—O5 | −176.59 (17) |
| N1—C1—C6—C9 | −0.2 (3) | C10—C11—C15—O5 | −57.2 (2) |
| C2—C1—C6—C9 | −178.5 (2) | C14—C11—C15—O5 | 64.0 (2) |
| C3—C2—C7—O1 | 175.0 (3) | C2—C1—N1—C11 | −158.1 (2) |
| C1—C2—C7—O1 | −6.1 (4) | C6—C1—N1—C11 | 23.6 (3) |
| C3—C2—C7—C8 | −5.2 (4) | C10—C11—N1—C1 | −32.7 (3) |
| C1—C2—C7—C8 | 173.6 (2) | C14—C11—N1—C1 | −155.0 (2) |
| C5—C6—C9—C10 | 169.4 (2) | C15—C11—N1—C1 | 86.3 (3) |
| C1—C6—C9—C10 | −10.4 (3) | O2—C12—O3—C13 | −0.9 (4) |
| C5—C6—C9—C12 | −10.7 (4) | C9—C12—O3—C13 | 178.3 (2) |
| C1—C6—C9—C12 | 169.5 (2) | O4—C15—O5—C16 | 1.8 (4) |
| C6—C9—C10—C11 | −1.3 (4) | C11—C15—O5—C16 | −178.1 (2) |
| Cg1 is the centroid of the C1–C6 ring. |
| H··· | ||||
| N1—H1···O1 | 0.86 (2) | 1.95 (2) | 2.650 (2) | 138 (2) |
| C10—H10···O3i | 0.93 | 2.59 | 3.517 (3) | 174 |
| C14—H14C···Cg1i | 0.96 | 2.89 | 3.692 (3) | 142 |
| C8—H8B···Cg1ii | 0.96 | 2.85 | 3.501 (3) | 126 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1 | 0.86 (2) | 1.95 (2) | 2.650 (2) | 138 (2) |
| C10—H10⋯O3i | 0.93 | 2.59 | 3.517 (3) | 174 |
| C14—H14 | 0.96 | 2.89 | 3.692 (3) | 142 |
| C8—H8 | 0.96 | 2.85 | 3.501 (3) | 126 |
Symmetry codes: (i) ; (ii) .