Literature DB >> 21522287

Poly[bis-[μ(2)-(dimethyl-aza-nium-yl)methyl-enediphospho-nato]magnesium].

Qiao-Sheng Hu1, Xiao-Yu Deng, Yu-Hui Sun, Zi-Yi Du.   

Abstract

The title compound, [Mg(C(3)H(10)NO(6)P(2))(2)](n), synthesized by a hydro-thermal method, adopts a one-dimensional polymeric chain structure and is isotypic with the previously reported Cd complex based on the ligand N,N-dimethyl-amino-methane-1,1-diphospho-nic acid (H(4)L). The asymmetric unit contains one half Mg(2+) ion and one H(3)L(-) anion. The unique Mg(2+) ion lies on an inversion center and is octa-hedrally coordinated by O atoms from six phospho-nate groups of four different H(3)L(-) anions. Each H(3)L(-) anion, with one protonated N atom and two phospho-nate OH groups, serves as a tridentate ligand. Two of its six phospho-nate O atoms chelate to a Mg(2+) cation in a bidentate fashion, while a third O atom bridges to a neighbouring Mg(2+) ion. The inter-connection of Mg(2+) ions by the H(3)L(-)anions leads to the formation of a polymer chain along the a axis in which the adjacent Mg(2+) ions are doubly bridged by two equivalent H(3)L(-) anions. These discrete chains are further assembled into a three-dimensional supra-molecular network via O-H⋯O and N-H⋯O hydrogen bonds involving the non-coordin-ated phospho-nate O atoms and the protonated N atoms.

Entities:  

Year:  2011        PMID: 21522287      PMCID: PMC3052111          DOI: 10.1107/S1600536811005976

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For other metal n class="Chemical">complexes based on the N,N-dimethyl­amino­methane-1,1- diphospho­nate ligand, see: Du et al. (2009 ▶, 2010a ▶,b ▶). For bond-length data, see: Lutz & Muller (1995 ▶); Distler et al. (1999 ▶); Stock & Bein (2004 ▶).

Experimental

Crystal data

[Mg(C3H10NO6P2)2] M = 460.43 Monoclinin class="Chemical">c, a = 5.4507 (3) Å b = 11.2166 (6) Å c = 12.5770 (7) Å β = 94.984 (1)° V = 766.03 (7) Å3 Z = 2 Mo Kα radiation μ = 0.61 mm−1 T = 296 K 0.40 × 0.30 × 0.24 mm

Data collection

Bruker SMART APEX Cn class="Chemical">CD area-detector diffractometer Absorption corren class="Chemical">ction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.675, T max = 0.746 4801 measured reflections 1492 independent reflections 1447 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.066 S = 1.09 1492 reflections 115 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.33 e Å−3 Data collection: SMART (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal strun class="Chemical">cture: contains datablocks I, global. DOI: 10.1107/S1600536811005976/sj5102sup1.cif Structure fan class="Chemical">ctors: contains datablocks I. DOI: 10.1107/S1600536811005976/sj5102Isup2.hkl Additional supplementary materials: crystallographin class="Chemical">c information; 3D view; checkCIF report
[Mg(C3H10NO6P2)2]F(000) = 476
Mr = 460.43Dx = 1.996 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4647 reflections
a = 5.4507 (3) Åθ = 2.4–29.4°
b = 11.2166 (6) ŵ = 0.61 mm1
c = 12.5770 (7) ÅT = 296 K
β = 94.984 (1)°Block, colourless
V = 766.03 (7) Å30.40 × 0.30 × 0.24 mm
Z = 2
Bruker SMART APEX CCD area-detector diffractometer1492 independent reflections
Radiation source: fine-focus sealed tube1447 reflections with I > 2σ(I)
graphiteRint = 0.014
φ and ω scansθmax = 26.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −6→6
Tmin = 0.675, Tmax = 0.746k = −13→13
4801 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.066H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0347P)2 + 0.6187P] where P = (Fo2 + 2Fc2)/3
1492 reflections(Δ/σ)max = 0.001
115 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.33 e Å3
Experimental. IR data (KBr, ν, cm-1): 3437 (m), 3137 (s), 3071 (m), 2986 (m), 2826 (m), 2280 (m), 1815 (m), 1473 (m), 1457 (m), 1421 (m), 1388 (m), 1256 (s), 1225 (s), 1200 (versus), 1155 (s), 1128 (s), 1088 (s), 1036 (s), 995 (s), 950 (s), 928 (s), 854 (m), 827 (m), 725 (m), 615 (m), 573 (s), 517 (m), 476 (m).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mg10.00000.50000.50000.01237 (17)
P10.52519 (7)0.34374 (3)0.59421 (3)0.01109 (12)
P20.34788 (7)0.55738 (3)0.72234 (3)0.01225 (13)
N10.5807 (3)0.35032 (12)0.81729 (11)0.0161 (3)
H1B0.63070.27570.80070.019*
C10.4187 (3)0.39596 (14)0.72149 (12)0.0126 (3)
H1A0.25960.35650.72620.015*
C20.4447 (4)0.33952 (16)0.91574 (13)0.0217 (4)
H2A0.55450.31020.97370.032*
H2B0.30960.28510.90240.032*
H2C0.38310.41630.93410.032*
C30.8076 (3)0.42374 (19)0.84083 (15)0.0264 (4)
H3A0.90270.39180.90210.040*
H3B0.76200.50450.85500.040*
H3C0.90410.42210.78050.040*
O10.7774 (2)0.38860 (10)0.57970 (9)0.0168 (3)
O20.3180 (2)0.38023 (10)0.51279 (9)0.0160 (2)
O30.5417 (2)0.20563 (10)0.60652 (10)0.0182 (3)
H3D0.41140.18000.62530.027*
O40.5780 (2)0.62560 (11)0.68532 (9)0.0177 (3)
H4A0.58460.61610.62100.027*
O50.1277 (2)0.57125 (10)0.64393 (9)0.0167 (3)
O60.3209 (2)0.59441 (11)0.83501 (9)0.0187 (3)
U11U22U33U12U13U23
Mg10.0099 (4)0.0144 (4)0.0127 (4)−0.0013 (3)0.0006 (3)0.0007 (3)
P10.0111 (2)0.0108 (2)0.0117 (2)−0.00042 (14)0.00234 (15)0.00033 (14)
P20.0116 (2)0.0127 (2)0.0124 (2)0.00185 (14)0.00060 (15)−0.00118 (14)
N10.0179 (7)0.0157 (7)0.0144 (6)0.0044 (5)−0.0008 (5)0.0006 (5)
C10.0116 (7)0.0146 (7)0.0114 (7)0.0011 (6)0.0004 (6)0.0000 (6)
C20.0286 (10)0.0216 (9)0.0150 (8)0.0014 (7)0.0029 (7)0.0032 (6)
C30.0153 (9)0.0371 (10)0.0257 (9)−0.0014 (8)−0.0047 (7)0.0022 (8)
O10.0137 (6)0.0172 (6)0.0200 (6)−0.0027 (4)0.0041 (4)0.0022 (5)
O20.0142 (6)0.0197 (6)0.0141 (5)0.0016 (4)0.0008 (4)0.0009 (4)
O30.0178 (6)0.0122 (6)0.0253 (6)−0.0009 (4)0.0067 (5)0.0010 (5)
O40.0171 (6)0.0191 (6)0.0171 (5)−0.0036 (5)0.0022 (5)−0.0025 (5)
O50.0147 (6)0.0173 (6)0.0174 (6)0.0022 (4)−0.0018 (5)−0.0004 (4)
O60.0196 (6)0.0217 (6)0.0148 (6)0.0060 (5)0.0015 (5)−0.0033 (5)
Mg1—O5i2.0448 (11)N1—C31.494 (2)
Mg1—O52.0448 (11)N1—C21.502 (2)
Mg1—O1ii2.0615 (11)N1—C11.5196 (19)
Mg1—O1iii2.0616 (11)N1—H1B0.9100
Mg1—O22.1879 (11)C1—H1A0.9800
Mg1—O2i2.1879 (11)C2—H2A0.9600
P1—O11.4898 (12)C2—H2B0.9600
P1—O21.5134 (12)C2—H2C0.9600
P1—O31.5587 (12)C3—H3A0.9600
P1—C11.8451 (15)C3—H3B0.9600
P2—O51.4938 (12)C3—H3C0.9600
P2—O61.4961 (12)O1—Mg1iv2.0615 (11)
P2—O41.5737 (12)O3—H3D0.8200
P2—C11.8515 (16)O4—H4A0.8200
O5i—Mg1—O5179.999 (1)C3—N1—C1112.68 (13)
O5i—Mg1—O1ii88.62 (5)C2—N1—C1112.71 (13)
O5—Mg1—O1ii91.38 (5)C3—N1—H1B107.1
O5i—Mg1—O1iii91.38 (5)C2—N1—H1B107.1
O5—Mg1—O1iii88.62 (5)C1—N1—H1B107.1
O1ii—Mg1—O1iii180.0N1—C1—P1112.08 (10)
O5i—Mg1—O291.82 (4)N1—C1—P2115.59 (10)
O5—Mg1—O288.18 (4)P1—C1—P2113.39 (8)
O1ii—Mg1—O284.94 (4)N1—C1—H1A104.8
O1iii—Mg1—O295.06 (4)P1—C1—H1A104.8
O5i—Mg1—O2i88.19 (4)P2—C1—H1A104.8
O5—Mg1—O2i91.82 (4)N1—C2—H2A109.5
O1ii—Mg1—O2i95.06 (4)N1—C2—H2B109.5
O1iii—Mg1—O2i84.94 (4)H2A—C2—H2B109.5
O2—Mg1—O2i180.00 (6)N1—C2—H2C109.5
O1—P1—O2117.90 (7)H2A—C2—H2C109.5
O1—P1—O3107.58 (7)H2B—C2—H2C109.5
O2—P1—O3111.67 (7)N1—C3—H3A109.5
O1—P1—C1111.24 (7)N1—C3—H3B109.5
O2—P1—C1103.22 (7)H3A—C3—H3B109.5
O3—P1—C1104.42 (7)N1—C3—H3C109.5
O5—P2—O6117.19 (7)H3A—C3—H3C109.5
O5—P2—O4111.67 (7)H3B—C3—H3C109.5
O6—P2—O4106.96 (7)P1—O1—Mg1iv148.50 (8)
O5—P2—C1104.71 (7)P1—O2—Mg1139.08 (7)
O6—P2—C1108.34 (7)P1—O3—H3D109.5
O4—P2—C1107.57 (7)P2—O4—H4A109.5
C3—N1—C2109.91 (14)P2—O5—Mg1137.38 (7)
D—H···AD—HH···AD···AD—H···A
N1—H1B···O30.912.573.0997 (18)118
N1—H1B···O4v0.912.313.1346 (18)151
O3—H3D···O6vi0.821.702.5011 (16)166
O4—H4A···O2ii0.821.812.6037 (16)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯O30.912.573.0997 (18)118
N1—H1B⋯O4i0.912.313.1346 (18)151
O3—H3D⋯O6ii0.821.702.5011 (16)166
O4—H4A⋯O2iii0.821.812.6037 (16)163

Symmetry codes: (i) ; (ii) ; (iii) .

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