Literature DB >> 21522284

Poly[[triaqua-(μ(3)-4-oxidopyridine-2,6-dicarboxyl-ato)terbium(III)] monohydrate].

Dong-Yu Lv, Zhu-Qing Gao, Jin-Zhong Gu.   

Abstract

In the title coordination polymer, {[n class="Chemical">Tb(C(7)H(2)NO(5))(H(2)O)(3)]·H(2)O}(n), the Tb(III) atom is eight-coordinated by a tridentate 4-oxidopyridine-2,6-dicarboxyl-ate trianion, two adjacent monodentate anions and three water mol-ecules, forming a distorted bicapped trigonal-prismatic TbNO(7) coordination environment. The anions bridge adjacent Tb(III) ions into double chains. Adjacent chains are further connected into sheets parallel to (10). O-H⋯O hydrogen bonds involving both coordinated and uncoordinated water mol-ecules generate a three-dimensional network.

Entities:  

Year:  2011        PMID: 21522284      PMCID: PMC3052142          DOI: 10.1107/S1600536811005447

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures and properties of luminescent lanthanide coordination compounds, see: Kustaryono et al. (2010 ▶); He et al. (2010 ▶); Li et al. (2008 ▶); Luo et al. (2008 ▶). For the use of multi-carboxyl­ate and n class="Chemical">heterocyclic acids in coordination chemistry, see: Li et al. (2008 ▶); Luo et al. (2008 ▶). For the dicarboxyl­ate ligand 4-oxido-pyridine-2,6-dicarboxyl­ate, see: Gao et al. (2008 ▶). For the isotypic structures of the Dy and Eu analogues, see: Gao et al. (2006 ▶) and Lv et al. (2010 ▶), respectively. For bond lengths and angles in other complexes with eight-coordinate TbIII, see: Chen et al. (2008 ▶); Ramya et al. (2010 ▶).

Experimental

Crystal data

[Tb(n class="CellLine">C7H2NO5)(H2O)3]·H2O M = 411.08 Monoclinic, a = 9.953 (2) Å b = 7.5454 (16) Å c = 15.461 (3) Å β = 105.126 (2)° V = 1120.9 (4) Å3 Z = 4 Mo Kα radiation μ = 6.35 mm−1 T = 293 K 0.30 × 0.25 × 0.22 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.162, T max = 0.247 7828 measured reflections 2080 independent reflections 1929 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.019 wR(F 2) = 0.051 S = 1.10 2080 reflections 196 parameters 12 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.34 e Å−3 Δρmin = −0.60 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and n class="Disease">DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005447/wm2449sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005447/wm2449Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Tb(C7H2NO5)(H2O)3]·H2OF(000) = 784
Mr = 411.08Dx = 2.436 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5700 reflections
a = 9.953 (2) Åθ = 2.2–28.3°
b = 7.5454 (16) ŵ = 6.35 mm1
c = 15.461 (3) ÅT = 293 K
β = 105.126 (2)°Block, colorless
V = 1120.9 (4) Å30.30 × 0.25 × 0.22 mm
Z = 4
Bruker APEXII CCD diffractometer2080 independent reflections
Radiation source: fine-focus sealed tube1929 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 25.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −12→11
Tmin = 0.162, Tmax = 0.247k = −9→8
7828 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.019H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.051w = 1/[σ2(Fo2) + (0.0227P)2 + 0.941P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
2080 reflectionsΔρmax = 1.34 e Å3
196 parametersΔρmin = −0.60 e Å3
12 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0244 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Tb10.499147 (11)0.823001 (18)0.253250 (7)0.01168 (10)
C10.5913 (3)0.8297 (4)0.06235 (18)0.0145 (6)
C20.4542 (3)0.7331 (4)0.03360 (17)0.0137 (6)
C30.3928 (3)0.6833 (4)−0.05345 (18)0.0157 (6)
H30.43670.7069−0.09840.019*
C40.2628 (3)0.5961 (4)−0.07393 (17)0.0150 (6)
C50.2059 (3)0.5615 (4)−0.00148 (17)0.0166 (6)
H50.12180.5012−0.01090.020*
C60.2739 (3)0.6163 (4)0.08284 (17)0.0149 (6)
C70.2160 (3)0.5940 (4)0.16200 (17)0.0176 (6)
H1W0.685 (3)0.519 (5)0.3081 (14)0.033 (10)*
H2W0.678 (4)0.555 (5)0.2179 (17)0.049 (12)*
H3W0.507 (4)0.547 (2)0.394 (2)0.049 (13)*
H4W0.477 (4)0.706 (4)0.433 (2)0.039 (12)*
H5W0.378 (3)1.090 (5)0.1149 (12)0.032 (10)*
H6W0.339 (4)1.121 (5)0.196 (2)0.051 (13)*
H7W0.348 (2)0.664 (5)0.544 (3)0.051 (14)*
H8W0.457 (5)0.756 (7)0.608 (3)0.11 (2)*
N10.3970 (3)0.7017 (3)0.10190 (15)0.0144 (5)
O10.6315 (2)0.8714 (3)0.14414 (12)0.0198 (5)
O20.6576 (2)0.8598 (3)0.00587 (13)0.0232 (5)
O30.2780 (2)0.6745 (3)0.23225 (14)0.0273 (6)
O40.1088 (2)0.5009 (3)0.15414 (12)0.0222 (5)
O50.1971 (2)0.5510 (3)−0.15625 (12)0.0191 (5)
O60.6360 (2)0.5619 (3)0.25964 (14)0.0286 (5)
O70.5014 (3)0.6624 (3)0.38879 (14)0.0254 (5)
O80.3974 (3)1.0761 (3)0.17129 (14)0.0294 (6)
O90.4360 (3)0.6777 (3)0.5670 (2)0.0376 (6)
U11U22U33U12U13U23
Tb10.00900 (13)0.01520 (14)0.01068 (12)−0.00006 (5)0.00229 (7)−0.00069 (4)
C10.0132 (15)0.0153 (15)0.0153 (13)0.0025 (11)0.0043 (11)0.0017 (10)
C20.0126 (15)0.0137 (14)0.0153 (12)0.0009 (12)0.0044 (11)0.0017 (11)
C30.0146 (16)0.0195 (16)0.0137 (13)0.0016 (11)0.0047 (11)0.0008 (10)
C40.0133 (15)0.0159 (15)0.0145 (12)0.0045 (12)0.0013 (10)−0.0021 (10)
C50.0121 (15)0.0184 (15)0.0186 (13)−0.0034 (12)0.0030 (11)−0.0012 (11)
C60.0113 (14)0.0165 (15)0.0168 (13)−0.0007 (12)0.0036 (11)0.0023 (11)
C70.0136 (15)0.0219 (16)0.0170 (13)0.0004 (13)0.0035 (11)0.0018 (11)
N10.0099 (13)0.0182 (13)0.0148 (11)−0.0016 (10)0.0027 (9)−0.0013 (9)
O10.0145 (11)0.0288 (12)0.0164 (10)−0.0054 (9)0.0048 (8)−0.0030 (8)
O20.0189 (12)0.0352 (13)0.0178 (10)−0.0049 (10)0.0087 (8)0.0022 (9)
O30.0229 (13)0.0446 (16)0.0165 (10)−0.0167 (10)0.0087 (9)−0.0084 (9)
O40.0184 (12)0.0307 (13)0.0178 (9)−0.0134 (10)0.0050 (8)−0.0016 (8)
O50.0155 (11)0.0272 (12)0.0126 (9)0.0033 (9)−0.0001 (8)−0.0052 (8)
O60.0329 (14)0.0328 (14)0.0226 (11)0.0189 (11)0.0118 (10)0.0066 (10)
O70.0338 (15)0.0226 (14)0.0218 (11)0.0025 (10)0.0107 (10)0.0009 (9)
O80.0394 (15)0.0339 (14)0.0198 (11)0.0178 (11)0.0163 (10)0.0098 (10)
O90.0222 (15)0.0273 (15)0.0595 (18)0.0038 (11)0.0041 (13)0.0031 (12)
Tb1—O5i2.3035 (19)C5—C61.367 (4)
Tb1—O82.368 (2)C5—H50.9300
Tb1—O62.383 (2)C6—N11.347 (4)
Tb1—O4ii2.4106 (19)C6—C71.492 (4)
Tb1—O32.415 (2)C7—O41.256 (3)
Tb1—O72.416 (2)C7—O31.257 (3)
Tb1—O12.424 (2)O4—Tb1iii2.4106 (19)
Tb1—N12.471 (2)O5—Tb1iv2.3035 (19)
C1—O21.245 (3)O6—H1W0.85 (4)
C1—O11.263 (3)O6—H2W0.86 (4)
C1—C21.508 (4)O7—H3W0.875 (16)
C2—N11.345 (4)O7—H4W0.85 (4)
C2—C31.377 (4)O8—H5W0.849 (16)
C3—C41.412 (4)O8—H6W0.85 (4)
C3—H30.9300O9—H7W0.86 (4)
C4—O51.315 (3)O9—H8W0.85 (4)
C4—C51.405 (4)
O5i—Tb1—O899.83 (8)C3—C2—C1123.8 (2)
O5i—Tb1—O685.81 (8)C2—C3—C4119.5 (3)
O8—Tb1—O6148.11 (7)C2—C3—H3120.2
O5i—Tb1—O4ii81.52 (7)C4—C3—H3120.2
O8—Tb1—O4ii70.97 (7)O5—C4—C5121.4 (3)
O6—Tb1—O4ii140.77 (7)O5—C4—C3122.2 (2)
O5i—Tb1—O3151.44 (7)C5—C4—C3116.4 (2)
O8—Tb1—O393.13 (9)C6—C5—C4120.1 (3)
O6—Tb1—O396.50 (8)C6—C5—H5120.0
O4ii—Tb1—O378.83 (7)C4—C5—H5120.0
O5i—Tb1—O782.37 (8)N1—C6—C5123.3 (3)
O8—Tb1—O7140.75 (8)N1—C6—C7113.5 (2)
O6—Tb1—O770.95 (8)C5—C6—C7123.2 (3)
O4ii—Tb1—O770.65 (7)O4—C7—O3124.5 (3)
O3—Tb1—O771.68 (8)O4—C7—C6118.9 (2)
O5i—Tb1—O180.00 (7)O3—C7—C6116.5 (3)
O8—Tb1—O174.95 (7)C2—N1—C6117.4 (2)
O6—Tb1—O175.22 (8)C2—N1—Tb1121.61 (19)
O4ii—Tb1—O1137.48 (7)C6—N1—Tb1120.69 (18)
O3—Tb1—O1128.19 (7)C1—O1—Tb1124.88 (18)
O7—Tb1—O1142.73 (8)C7—O3—Tb1124.41 (18)
O5i—Tb1—N1143.47 (8)C7—O4—Tb1iii138.84 (17)
O8—Tb1—N177.25 (8)C4—O5—Tb1iv127.69 (17)
O6—Tb1—N179.77 (8)Tb1—O6—H1W123 (2)
O4ii—Tb1—N1129.18 (8)Tb1—O6—H2W114 (3)
O3—Tb1—N164.24 (7)H1W—O6—H2W112 (3)
O7—Tb1—N1122.96 (8)Tb1—O7—H3W124 (2)
O1—Tb1—N163.95 (7)Tb1—O7—H4W125 (2)
O2—C1—O1124.7 (3)H3W—O7—H4W110 (3)
O2—C1—C2119.1 (2)Tb1—O8—H5W127 (2)
O1—C1—C2116.2 (2)Tb1—O8—H6W109 (3)
N1—C2—C3123.2 (3)H5W—O8—H6W115 (3)
N1—C2—C1112.9 (2)H7W—O9—H8W114 (3)
D—H···AD—HH···AD···AD—H···A
O6—H1W···O1v0.85 (4)2.10 (3)2.799 (3)139 (3)
O6—H2W···O5vi0.86 (4)1.93 (3)2.725 (3)154 (3)
O7—H3W···O9vii0.88 (2)1.84 (2)2.687 (3)162 (4)
O7—H4W···O90.85 (4)2.23 (3)2.995 (4)151 (3)
O8—H5W···O2viii0.85 (2)1.85 (2)2.693 (3)175 (4)
O8—H6W···O3ii0.85 (4)1.85 (4)2.680 (3)167 (4)
O9—H7W···O2ix0.86 (4)1.84 (2)2.699 (3)175 (4)
O9—H8W···O4i0.85 (4)2.37 (4)3.073 (4)141 (5)
Table 1

Selected bond lengths (Å)

Tb1—O5i2.3035 (19)
Tb1—O82.368 (2)
Tb1—O62.383 (2)
Tb1—O4ii2.4106 (19)
Tb1—O32.415 (2)
Tb1—O72.416 (2)
Tb1—O12.424 (2)
Tb1—N12.471 (2)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H1W⋯O1iii0.85 (4)2.10 (3)2.799 (3)139 (3)
O6—H2W⋯O5iv0.86 (4)1.93 (3)2.725 (3)154 (3)
O7—H3W⋯O9v0.88 (2)1.84 (2)2.687 (3)162 (4)
O7—H4W⋯O90.85 (4)2.23 (3)2.995 (4)151 (3)
O8—H5W⋯O2vi0.85 (2)1.85 (2)2.693 (3)175 (4)
O8—H6W⋯O3ii0.85 (4)1.85 (4)2.680 (3)167 (4)
O9—H7W⋯O2vii0.86 (4)1.84 (2)2.699 (3)175 (4)
O9—H8W⋯O4i0.85 (4)2.37 (4)3.073 (4)141 (5)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

  6 in total

1.  Control over interpenetration in lanthanide-organic frameworks: synthetic strategy and gas-adsorption properties.

Authors:  Haiyan He; Daqiang Yuan; Huiqing Ma; Daofeng Sun; Guoqing Zhang; Hong-Cai Zhou
Journal:  Inorg Chem       Date:  2010-09-06       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structures and magnetic properties of ferromagnetic coupling 2D Ln-M heterometallic coordination polymers (Ln = Ho, Er; M = Mn, Zn).

Authors:  Hong-Ling Gao; Bin Zhao; Xiao-Qing Zhao; You Song; Peng Cheng; Dai-Zheng Liao; Shi-Ping Yan
Journal:  Inorg Chem       Date:  2008-12-01       Impact factor: 5.165

4.  Synthesis and characterization of metal-organic frameworks based on 4-hydroxypyridine-2,6-dicarboxylic acid and pyridine-2,6-dicarboxylic acid ligands.

Authors:  Hong-Ling Gao; Long Yi; Bin Zhao; Xiao-Qing Zhao; Peng Cheng; Dai-Zheng Liao; Shi-Ping Yan
Journal:  Inorg Chem       Date:  2006-07-24       Impact factor: 5.165

5.  Synthesis, crystal structure, and photoluminescence of homodinuclear lanthanide 4-(dibenzylamino)benzoate complexes.

Authors:  A R Ramya; M L P Reddy; Alan H Cowley; Kalyan V Vasudevan
Journal:  Inorg Chem       Date:  2010-03-01       Impact factor: 5.165

6.  Poly[[triaqua-(μ(3)-4-oxidopyridine-2,6-dicarboxyl-ato)europium(III)] monohydrate].

Authors:  Dong-Yu Lv; Zhu-Qing Gao; Jin-Zhong Gu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-30
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.