Literature DB >> 21522269

Piperazinediium tetra-chloridocadmate monohydrate.

Meher El Glaoui, Imen Ben Gharbia, Valeria Ferretti, Cherif Ben Nasr.   

Abstract

In the title compound, (C(4)H(12)N(2))[n class="Chemical">CdCl(4)]·H(2)O, the [CdCl(4)](2-) anions adopt a slightly distorted tetra-hedral configuration. In the crystal, O-H⋯Cl hydrogen bonds link the anions and water mol-ecules into corrugated inorganic chains along the b axis which are inter-connected via piperazinediiumN-H⋯O and N-H⋯Cl inter-actions into a three-dimensional framework structure.

Entities:  

Year:  2011        PMID: 21522269      PMCID: PMC3051944          DOI: 10.1107/S1600536811005095

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For common applications of organic–inorganic hybrid mat­erials, see: Kobel & Hanack (1986 ▶); Pierpont & Jung (1994 ▶). For a related structure and discussion of geometrical features, see: Sutherland & Harrison (2009 ▶). For the coordination around the CdII cation, see: El Glaoui et al. (2009 ▶).

Experimental

Crystal data

(C4H12N2)[CdCl4H2O M = 360.38 Monoclinic, a = 6.6204 (2) Å b = 12.8772 (3) Å c = 14.0961 (4) Å β = 92.1710 (12)° V = 1200.86 (6) Å3 Z = 4 Mo Kα radiation μ = 2.67 mm−1 T = 295 K 0.52 × 0.48 × 0.30 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.374, T max = 0.444 8531 measured reflections 3461 independent reflections 2903 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.081 S = 1.09 3461 reflections 126 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.78 e Å−3 Δρmin = −1.75 e Å−3 Data collection: Kappa-CCD Server Software (Nonius, 1997 ▶); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶); software used to prepare material for publication: SHELXL97 and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811005095/zs2095sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005095/zs2095Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C4H12N2)[CdCl4]·H2OF(000) = 704
Mr = 360.38Dx = 1.993 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 8531 reflections
a = 6.6204 (2) Åθ = 2.0–30.0°
b = 12.8772 (3) ŵ = 2.67 mm1
c = 14.0961 (4) ÅT = 295 K
β = 92.1710 (12)°Prismatic, colourless
V = 1200.86 (6) Å30.52 × 0.48 × 0.30 mm
Z = 4
Nonius KappaCCD diffractometer3461 independent reflections
Radiation source: fine-focus sealed tube2903 reflections with I > 2σ(I)
graphiteRint = 0.037
φ scans and ω scansθmax = 30.0°, θmin = 3.1°
Absorption correction: multi-scan (SORTAV; Blessing, 1995)h = −9→9
Tmin = 0.374, Tmax = 0.444k = −17→17
8531 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.081w = 1/[σ2(Fo2) + (0.0389P)2 + 0.4362P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
3461 reflectionsΔρmax = 0.78 e Å3
126 parametersΔρmin = −1.75 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0778 (19)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.02921 (3)−0.001890 (11)0.235463 (13)0.03178 (9)
Cl10.07520 (10)−0.19208 (5)0.22725 (4)0.03972 (16)
Cl2−0.34472 (9)0.01950 (5)0.22883 (5)0.03628 (15)
Cl30.17473 (9)0.05843 (5)0.38740 (5)0.03822 (15)
Cl40.13421 (9)0.09489 (5)0.09660 (5)0.03906 (16)
N10.5582 (3)0.20385 (16)0.38723 (15)0.0312 (4)
N20.7142 (3)0.28658 (16)0.56419 (15)0.0321 (4)
C10.4546 (4)0.29108 (19)0.43473 (18)0.0358 (5)
H50.35090.26360.47460.043*
H60.38970.33550.38710.043*
C20.6036 (4)0.35402 (17)0.49466 (17)0.0343 (5)
H70.69910.38750.45400.041*
H80.53220.40770.52810.041*
C30.8195 (4)0.20021 (19)0.51588 (18)0.0345 (5)
H90.88790.15640.56290.041*
H100.92030.22850.47490.041*
C40.6703 (4)0.13687 (17)0.45821 (17)0.0318 (5)
H110.57520.10460.49980.038*
H120.74060.08220.42550.038*
O1W0.4133 (3)0.2110 (2)0.68116 (18)0.0644 (7)
H10.646 (5)0.232 (2)0.344 (2)0.038 (8)*
H20.461 (5)0.168 (3)0.357 (2)0.053 (9)*
H30.632 (5)0.255 (2)0.604 (2)0.040 (8)*
H40.803 (5)0.319 (2)0.592 (2)0.041 (8)*
H1W0.38880.14920.69620.080*
H2W0.31140.25060.67520.080*
U11U22U33U12U13U23
Cd10.03183 (12)0.03025 (13)0.03330 (13)0.00147 (6)0.00181 (8)0.00206 (6)
Cl10.0483 (4)0.0303 (3)0.0411 (3)0.0064 (2)0.0091 (3)−0.0011 (2)
Cl20.0298 (3)0.0379 (3)0.0412 (3)0.0020 (2)0.0026 (2)−0.0031 (2)
Cl30.0358 (3)0.0386 (3)0.0400 (3)−0.0045 (2)−0.0036 (2)−0.0027 (2)
Cl40.0327 (3)0.0419 (3)0.0433 (3)0.0050 (2)0.0105 (2)0.0109 (3)
N10.0336 (11)0.0330 (10)0.0270 (10)−0.0009 (8)0.0001 (8)−0.0034 (8)
N20.0328 (11)0.0316 (10)0.0320 (10)−0.0065 (8)0.0030 (8)−0.0065 (8)
C10.0362 (13)0.0354 (12)0.0361 (13)0.0073 (10)0.0022 (10)0.0015 (10)
C20.0417 (14)0.0238 (10)0.0381 (13)−0.0017 (9)0.0097 (10)−0.0025 (9)
C30.0304 (12)0.0330 (11)0.0397 (13)0.0019 (9)−0.0031 (10)−0.0061 (10)
C40.0366 (12)0.0252 (10)0.0333 (12)0.0016 (9)−0.0009 (9)−0.0026 (9)
O1W0.0435 (13)0.0692 (14)0.0818 (18)0.0050 (11)0.0183 (12)0.0334 (13)
Cd1—Cl32.4418 (6)C1—C21.510 (4)
Cd1—Cl42.4435 (6)C1—H50.9700
Cd1—Cl12.4712 (6)C1—H60.9700
Cd1—Cl22.4891 (7)C2—H70.9700
N1—C11.488 (3)C2—H80.9700
N1—C41.497 (3)C3—C41.497 (3)
N1—H10.93 (3)C3—H90.9700
N1—H20.89 (3)C3—H100.9700
N2—C21.482 (3)C4—H110.9700
N2—C31.491 (3)C4—H120.9700
N2—H30.89 (3)O1W—H1W0.84
N2—H40.81 (3)O1W—H2W0.85
Cl3—Cd1—Cl4115.19 (2)C2—C1—H6109.5
Cl3—Cd1—Cl1108.13 (2)H5—C1—H6108.1
Cl4—Cd1—Cl1115.38 (2)N2—C2—C1110.57 (19)
Cl3—Cd1—Cl2110.89 (2)N2—C2—H7109.5
Cl4—Cd1—Cl2103.07 (2)C1—C2—H7109.5
Cl1—Cd1—Cl2103.42 (2)N2—C2—H8109.5
C1—N1—C4111.06 (18)C1—C2—H8109.5
C1—N1—H2106 (2)H7—C2—H8108.1
C4—N1—H2111 (2)N2—C3—C4110.14 (19)
C1—N1—H1107.8 (18)N2—C3—H9109.6
C4—N1—H1111.2 (19)C4—C3—H9109.6
H1—N1—H2110 (3)N2—C3—H10109.6
C2—N2—C3111.28 (19)C4—C3—H10109.6
C2—N2—H3113 (2)H9—C3—H10108.1
C3—N2—H3104.5 (18)C3—C4—N1110.45 (19)
C2—N2—H4110 (2)C3—C4—H11109.6
C3—N2—H4106 (2)N1—C4—H11109.6
H3—N2—H4112 (3)C3—C4—H12109.6
N1—C1—C2110.8 (2)N1—C4—H12109.6
N1—C1—H5109.5H11—C4—H12108.1
C2—C1—H5109.5H1W—O1W—H2W116
N1—C1—H6109.5
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl1i0.93 (3)2.35 (3)3.254 (2)164 (3)
N1—H2···Cl30.89 (3)2.41 (4)3.155 (2)141 (3)
N2—H3···O1W0.89 (3)1.93 (3)2.808 (3)167 (3)
N2—H4···Cl4ii0.81 (3)2.46 (3)3.190 (2)151 (3)
O1W—H1W···Cl2iii0.842.443.267 (3)168
O1W—H2W···Cl4iv0.852.543.304 (2)150
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Cl1i0.93 (3)2.35 (3)3.254 (2)164 (3)
N1—H2⋯Cl30.89 (3)2.41 (4)3.155 (2)141 (3)
N2—H3⋯O1W0.89 (3)1.93 (3)2.808 (3)167 (3)
N2—H4⋯Cl4ii0.81 (3)2.46 (3)3.190 (2)151 (3)
O1W—H1W⋯Cl2iii0.842.443.267 (3)168
O1W—H2W⋯Cl4iv0.852.543.304 (2)150

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Piperazinediium tetra-chloridozincate(II).

Authors:  Pamela A Sutherland; William T A Harrison
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-25
  3 in total

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