Literature DB >> 21521150

On various metrics used for validation of predictive QSAR models with applications in virtual screening and focused library design.

Kunal Roy1, Indrani Mitra.   

Abstract

Quantitative structure-activity relationships (QSARs) have important applications in drug discovery research, environmental fate modeling, property prediction, etc. Validation has been recognized as a very important step for QSAR model development. As one of the important objectives of QSAR modeling is to predict activity/property/toxicity of new chemicals falling within the domain of applicability of the developed models and QSARs are being used for regulatory decisions, checking reliability of the models and confidence of their predictions is a very important aspect, which can be judged during the validation process. One prime application of a statistically significant QSAR model is virtual screening for molecules with improved potency based on the pharmacophoric features and the descriptors appearing in the QSAR model. Validated QSAR models may also be utilized for design of focused libraries which may be subsequently screened for the selection of hits. The present review focuses on various metrics used for validation of predictive QSAR models together with an overview of the application of QSAR models in the fields of virtual screening and focused library design for diverse series of compounds with citation of some recent examples.

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Year:  2011        PMID: 21521150     DOI: 10.2174/138620711795767893

Source DB:  PubMed          Journal:  Comb Chem High Throughput Screen        ISSN: 1386-2073            Impact factor:   1.339


  17 in total

1.  Discovery of novel urokinase plasminogen activator (uPA) inhibitors using ligand-based modeling and virtual screening followed by in vitro analysis.

Authors:  Mahmoud A Al-Sha'er; Mohammad A Khanfar; Mutasem O Taha
Journal:  J Mol Model       Date:  2014-01-28       Impact factor: 1.810

2.  Predictive QSAR modelling of algal toxicity of ionic liquids and its interspecies correlation with Daphnia toxicity.

Authors:  Kunal Roy; Rudra Narayan Das; Paul L A Popelier
Journal:  Environ Sci Pollut Res Int       Date:  2014-11-21       Impact factor: 4.223

3.  A novel approach for assessment of antitrypanosomal activity of sesquiterpene lactones through additive and non-additive molecular structure parameters.

Authors:  Mohammad Hossein Keshavarz; Zeinab Shirazi; Faezeh Sayehvand
Journal:  Mol Divers       Date:  2022-07-17       Impact factor: 3.364

4.  Ligand binding studies, preliminary structure-activity relationship and detailed mechanistic characterization of 1-phenyl-6,6-dimethyl-1,3,5-triazine-2,4-diamine derivatives as inhibitors of Escherichia coli dihydrofolate reductase.

Authors:  Bharath Srinivasan; Sam Tonddast-Navaei; Jeffrey Skolnick
Journal:  Eur J Med Chem       Date:  2015-09-05       Impact factor: 6.514

5.  Identification and characterization of agnuside, a natural proangiogenic small molecule.

Authors:  Piyush Pillarisetti; Kenneth A Myers
Journal:  Eur J Med Chem       Date:  2018-10-05       Impact factor: 6.514

6.  A Predictive HQSAR Model for a Series of Tricycle Core Containing MMP-12 Inhibitors with Dibenzofuran Ring.

Authors:  Jamal Shamsara; Ahmad Shahir-Sadr
Journal:  Int J Med Chem       Date:  2014-12-07

7.  In silico Guided Drug Repurposing: Discovery of New Competitive and Non-competitive Inhibitors of Falcipain-2.

Authors:  Lucas N Alberca; Sara R Chuguransky; Cora L Álvarez; Alan Talevi; Emir Salas-Sarduy
Journal:  Front Chem       Date:  2019-08-06       Impact factor: 5.221

Review 8.  Schistosomiasis Drug Discovery in the Era of Automation and Artificial Intelligence.

Authors:  José T Moreira-Filho; Arthur C Silva; Rafael F Dantas; Barbara F Gomes; Lauro R Souza Neto; Jose Brandao-Neto; Raymond J Owens; Nicholas Furnham; Bruno J Neves; Floriano P Silva-Junior; Carolina H Andrade
Journal:  Front Immunol       Date:  2021-05-31       Impact factor: 7.561

9.  QSAR, molecular docking and ADMET properties in silico studies of novel 4,5,6,7-tetrahydrobenzo[D]-thiazol-2-Yl derivatives derived from dimedone as potent anti-tumor agents through inhibition of C-Met receptor tyrosine kinase.

Authors:  Ossama Daoui; Souad Elkhattabi; Samir Chtita; Rachida Elkhalabi; Hsaine Zgou; Adil Touimi Benjelloun
Journal:  Heliyon       Date:  2021-07-03

10.  Thermal Conductivity Estimation of Diverse Liquid Aliphatic Oxygen-Containing Organic Compounds Using the Quantitative Structure-Property Relationship Method.

Authors:  Haixia Lu; Wanqiang Liu; Fan Yang; Hu Zhou; Fengping Liu; Hua Yuan; Guanfan Chen; Yinchun Jiao
Journal:  ACS Omega       Date:  2020-04-08
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