Literature DB >> 21521047

Online variational inference for state-space models with point-process observations.

Andrew Zammit Mangion1, Ke Yuan, Visakan Kadirkamanathan, Mahesan Niranjan, Guido Sanguinetti.   

Abstract

We present a variational Bayesian (VB) approach for the state and parameter inference of a state-space model with point-process observations, a physiologically plausible model for signal processing of spike data. We also give the derivation of a variational smoother, as well as an efficient online filtering algorithm, which can also be used to track changes in physiological parameters. The methods are assessed on simulated data, and results are compared to expectation-maximization, as well as Monte Carlo estimation techniques, in order to evaluate the accuracy of the proposed approach. The VB filter is further assessed on a data set of taste-response neural cells, showing that the proposed approach can effectively capture dynamical changes in neural responses in real time.

Mesh:

Year:  2011        PMID: 21521047     DOI: 10.1162/NECO_a_00156

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  2 in total

1.  Point process modelling of the Afghan War Diary.

Authors:  Andrew Zammit-Mangion; Michael Dewar; Visakan Kadirkamanathan; Guido Sanguinetti
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-16       Impact factor: 11.205

2.  A latent low-dimensional common input drives a pool of motor neurons: a probabilistic latent state-space model.

Authors:  Daniel F Feeney; François G Meyer; Nicholas Noone; Roger M Enoka
Journal:  J Neurophysiol       Date:  2017-08-02       Impact factor: 2.714

  2 in total

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