Literature DB >> 21517635

Physical time scale in kinetic Monte Carlo simulations of continuous-time Markov chains.

Santiago A Serebrinsky1.   

Abstract

We rigorously establish a physical time scale for a general class of kinetic Monte Carlo algorithms for the simulation of continuous-time Markov chains. This class of algorithms encompasses rejection-free (or BKL) and rejection (or "standard") algorithms. For rejection algorithms, it was formerly considered that the availability of a physical time scale (instead of Monte Carlo steps) was empirical, at best. Use of Monte Carlo steps as a time unit now becomes completely unnecessary.

Entities:  

Mesh:

Year:  2011        PMID: 21517635     DOI: 10.1103/PhysRevE.83.037701

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Protein Phase Separation Provides Long-Term Memory of Transient Spatial Stimuli.

Authors:  Elliot Dine; Agnieszka A Gil; Giselle Uribe; Clifford P Brangwynne; Jared E Toettcher
Journal:  Cell Syst       Date:  2018-05-30       Impact factor: 10.304

2.  Dynamic Instability from Non-equilibrium Structural Transitions on the Energy Landscape of Microtubule.

Authors:  Shannon F Stewman; Kenneth K Tsui; Ao Ma
Journal:  Cell Syst       Date:  2020-10-20       Impact factor: 10.304

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.