Literature DB >> 21515775

Genome sequence of Rhizobium etli CNPAF512, a nitrogen-fixing symbiont isolated from bean root nodules in Brazil.

Maarten Fauvart1, Aminael Sánchez-Rodríguez, Serge Beullens, Kathleen Marchal, Jan Michiels.   

Abstract

Rhizobium etli is a Gram-negative soil-dwelling alphaproteobacterium that carries out symbiotic biological nitrogen fixation in close association with legume hosts. R. etli strains exhibit high sequence divergence and are geographically structured, with a potentially dramatic influence on the outcome of symbiosis. Here, we present the genome sequence of R. etli CNPAF512, a Brazilian isolate from bean nodules. We anticipate that the availability of genome sequences of R. etli strains from distinctly different areas will provide valuable new insights into the geographic mosaic of the R. etli pangenome and the evolutionary dynamics that shape it.

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Year:  2011        PMID: 21515775      PMCID: PMC3133211          DOI: 10.1128/JB.00310-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  14 in total

1.  Characteristics of the rhizobia associated with Dalea spp. in the Ordway, Kellogg-Weaver Dunes, and Hayden prairies.

Authors:  B Tlusty; P van Berkum; P H Graham
Journal:  Can J Microbiol       Date:  2005-01       Impact factor: 2.419

Review 2.  Rhizobial secreted proteins as determinants of host specificity in the rhizobium-legume symbiosis.

Authors:  Maarten Fauvart; Jan Michiels
Journal:  FEMS Microbiol Lett       Date:  2008-08       Impact factor: 2.742

3.  Mapping short DNA sequencing reads and calling variants using mapping quality scores.

Authors:  Heng Li; Jue Ruan; Richard Durbin
Journal:  Genome Res       Date:  2008-08-19       Impact factor: 9.043

Review 4.  Molecular determinants of a symbiotic chronic infection.

Authors:  Katherine E Gibson; Hajime Kobayashi; Graham C Walker
Journal:  Annu Rev Genet       Date:  2008       Impact factor: 16.830

5.  Evolutionary dynamics of insertion sequences in relation to the evolutionary histories of the chromosome and symbiotic plasmid genes of Rhizobium etli populations.

Authors:  Luis Lozano; Ismael Hernández-González; Patricia Bustos; Rosa I Santamaría; Valeria Souza; J Peter W Young; Guillermo Dávila; Víctor González
Journal:  Appl Environ Microbiol       Date:  2010-07-30       Impact factor: 4.792

6.  The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.

Authors:  Víctor González; Rosa I Santamaría; Patricia Bustos; Ismael Hernández-González; Arturo Medrano-Soto; Gabriel Moreno-Hagelsieb; Sarath Chandra Janga; Miguel A Ramírez; Verónica Jiménez-Jacinto; Julio Collado-Vides; Guillermo Dávila
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

7.  Rhizobium etli bv. mimosae, a novel biovar isolated from Mimosa affinis.

Authors:  E T Wang; M A Rogel; A García-de los Santos; J Martínez-Romero; M A Cevallos; E Martínez-Romero
Journal:  Int J Syst Bacteriol       Date:  1999-10

8.  The Rhizobium etli rpoN locus: DNA sequence analysis and phenotypical characterization of rpoN, ptsN, and ptsA mutants.

Authors:  J Michiels; T Van Soom; I D'hooghe; B Dombrecht; T Benhassine; P de Wilde; J Vanderleyden
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

9.  Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov.

Authors:  L Segovia; J P Young; E Martínez-Romero
Journal:  Int J Syst Bacteriol       Date:  1993-04

10.  Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L.

Authors:  I Hernandez-Lucas; L Segovia; E Martinez-Romero; S G Pueppke
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

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