Literature DB >> 21515716

Association of earthworm-denitrifier interactions with increased emission of nitrous oxide from soil mesocosms amended with crop residue.

Lucas D Nebert1, Jaap Bloem, Ingrid M Lubbers, Jan Willem van Groenigen.   

Abstract

Earthworm activity is known to increase emissions of nitrous oxide (N(2)O) from arable soils. Earthworm gut, casts, and burrows have exhibited higher denitrification activities than the bulk soil, implicating priming of denitrifying organisms as a possible mechanism for this effect. Furthermore, the earthworm feeding strategy may drive N(2)O emissions, as it determines access to fresh organic matter for denitrification. Here, we determined whether interactions between earthworm feeding strategy and the soil denitrifier community can predict N(2)O emissions from the soil. We set up a 90-day mesocosm experiment in which (15)N-labeled maize (Zea mays L.) was either mixed in or applied on top of the soil in the presence or absence of the epigeic earthworm Lumbricus rubellus and/or the endogeic earthworm Aporrectodea caliginosa. We measured N(2)O fluxes and tested the bulk soil for denitrification enzyme activity and the abundance of 16S rRNA and denitrifier genes nirS and nosZ through real-time quantitative PCR. Compared to the control, L. rubellus increased denitrification enzyme activity and N(2)O emissions on days 21 and 90 (day 21, P = 0.034 and P = 0.002, respectively; day 90, P = 0.001 and P = 0.007, respectively), as well as cumulative N(2)O emissions (76%; P = 0.014). A. caliginosa activity led to a transient increase of N(2)O emissions on days 8 to 18 of the experiment. Abundance of nosZ was significantly increased (100%) on day 90 in the treatment mixture containing L. rubellus alone. We conclude that L. rubellus increased cumulative N(2)O emissions by affecting denitrifier community activity via incorporation of fresh residue into the soil and supplying a steady, labile carbon source.

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Year:  2011        PMID: 21515716      PMCID: PMC3131621          DOI: 10.1128/AEM.00033-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  15 in total

1.  Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus.

Authors:  Michelle A Furlong; David R Singleton; David C Coleman; William B Whitman
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

2.  Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data.

Authors:  Christian Ramakers; Jan M Ruijter; Ronald H Lekanne Deprez; Antoon F M Moorman
Journal:  Neurosci Lett       Date:  2003-03-13       Impact factor: 3.046

3.  Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays.

Authors:  Noah Fierer; Jason A Jackson; Rytas Vilgalys; Robert B Jackson
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

4.  Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE.

Authors:  Ingela Noredal Throbäck; Karin Enwall; Asa Jarvis; Sara Hallin
Journal:  FEMS Microbiol Ecol       Date:  2004-09-01       Impact factor: 4.194

5.  N2O-producing microorganisms in the gut of the earthworm Aporrectodea caliginosa are indicative of ingested soil bacteria.

Authors:  Julian Ihssen; Marcus A Horn; Carola Matthies; Anita Gössner; Andreas Schramm; Harold L Drake
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

6.  Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils.

Authors:  S Henry; D Bru; B Stres; S Hallet; L Philippot
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

7.  Bacterial gene abundances as indicators of greenhouse gas emission in soils.

Authors:  Sergio E Morales; Theodore Cosart; William E Holben
Journal:  ISME J       Date:  2010-02-25       Impact factor: 10.302

8.  Effect of earthworm feeding guilds on ingested dissimilatory nitrate reducers and denitrifiers in the alimentary canal of the earthworm.

Authors:  Peter S Depkat-Jakob; Maik Hilgarth; Marcus A Horn; Harold L Drake
Journal:  Appl Environ Microbiol       Date:  2010-07-23       Impact factor: 4.792

9.  Changes in denitrifier abundance, denitrification gene mRNA levels, nitrous oxide emissions, and denitrification in anoxic soil microcosms amended with glucose and plant residues.

Authors:  Sherri L Henderson; Catherine E Dandie; Cheryl L Patten; Bernie J Zebarth; David L Burton; Jack T Trevors; Claudia Goyer
Journal:  Appl Environ Microbiol       Date:  2010-02-12       Impact factor: 4.792

10.  Carbon availability controls the growth of detritivores (Lumbricidae) and their effect on nitrogen mineralization.

Authors:  Alexei V Tiunov; Stefan Scheu
Journal:  Oecologia       Date:  2003-10-03       Impact factor: 3.225

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  4 in total

1.  Exploring the effects of earthworms on bacterial profiles during vermicomposting process of sewage sludge and cattle dung with high-throughput sequencing.

Authors:  Baoyi Lv; Meiyan Xing; Jian Yang
Journal:  Environ Sci Pollut Res Int       Date:  2018-02-20       Impact factor: 4.223

2.  Simultaneous Carbon and Nitrogen Removal from Domestic Wastewater using High Rate Vermifilter.

Authors:  Sanket Dey Chowdhury; Puspendu Bhunia
Journal:  Indian J Microbiol       Date:  2021-04-02

3.  Temporal Variation of Earthworm Impacts on Soil Organic Carbon under Different Tillage Systems.

Authors:  Yafei Guo; Xiaoping Zhang; Yan Zhang; Donghui Wu; Neil McLaughlin; Shixiu Zhang; Xuewen Chen; Shuxia Jia; Aizhen Liang
Journal:  Int J Environ Res Public Health       Date:  2019-05-30       Impact factor: 3.390

4.  Soil fauna diversity increases CO2 but suppresses N2 O emissions from soil.

Authors:  Ingrid M Lubbers; Matty P Berg; Gerlinde B De Deyn; Wim H van der Putten; Jan Willem van Groenigen
Journal:  Glob Chang Biol       Date:  2019-11-04       Impact factor: 10.863

  4 in total

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