Literature DB >> 21514365

The Galβ-(syn)-gauche configuration is required for galectin-recognition disaccharides.

Jun Iwaki1, Hiroaki Tateno, Nozomu Nishi, Toshikazu Minamisawa, Sachiko Nakamura-Tsuruta, Yoko Itakura, Junko Kominami, Tadasu Urashima, Takanori Nakamura, Jun Hirabayashi.   

Abstract

BACKGROUND: Galectins form a large family of animal lectins, individual members having variously divergent carbohydrate-recognition domains (CRDs) responsible for extensive physiological phenomena. Sugar-binding affinities of galectins were previously investigated by us using frontal affinity chromatography (FAC) with a relatively small set (i.e., 41) of oligosaccharides. However, total understanding of a consensus rule for galectin-recognition saccharides is still hampered by the lack of fundamental knowledge about their sugar-binding specificity toward a much larger panel of oligosaccharides in terms of dissociation constant (K(d)).
METHODS: In the present study, we extended a FAC analysis from a more systematic viewpoint by using 142 fluorescent-labeled oligosaccharides, initially with focus on functional human galectins-1-9. Binding characteristics were further validated with 11 non-human galectins and 13 non-galectin Gal/GalNAc-binding lectins belonging to different families.
RESULTS: An empirical [Galβ-equatorial] rule for galectin-recognition disaccharides was first derived by our present research and previous works by others. However, this rule was not valid for a recently reported nematode disaccharide, "Galβ1-4-L-Fuc" [Butschi et al. PLoS Pathog, 2010; 6(1):e1000717], because this glycosidic linkage was directed to 'axial' 4-OH of L-Fuc. After careful reconsideration of the structural data, we reached an ultimate rule of galectin-recognition disaccharides, which all of the galectins so far identified fulfilled, i.e., under the re-defined configuration "Galβ-(syn)-gauche". The rule also worked perfectly for differentiation of galectins from other types of lectins. GENERAL SIGNIFICANCE: The present attempt should provide a basis to solve the riddle of the glyco-code as well as to develop therapeutic inhibitors mimicking galectin ligands. 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21514365     DOI: 10.1016/j.bbagen.2011.04.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  4 in total

1.  Structural and quantitative evidence for dynamic glycome shift on production of induced pluripotent stem cells.

Authors:  Kayo Hasehira; Hiroaki Tateno; Yasuko Onuma; Yuzuru Ito; Makoto Asashima; Jun Hirabayashi
Journal:  Mol Cell Proteomics       Date:  2012-09-27       Impact factor: 5.911

2.  Cooperative Interactions of Oligosaccharide and Peptide Moieties of a Glycopeptide Derived from IgE with Galectin-9.

Authors:  Shin-Ichi Nakakita; Aiko Itoh; Yukari Nakakita; Yasuhiro Nonaka; Takashi Ogawa; Takanori Nakamura; Nozomu Nishi
Journal:  J Biol Chem       Date:  2015-11-18       Impact factor: 5.157

Review 3.  Application of Lectin Microarrays for Biomarker Discovery.

Authors:  Kai Dang; Wenjuan Zhang; Shanfeng Jiang; Xiao Lin; Airong Qian
Journal:  ChemistryOpen       Date:  2020-03-02       Impact factor: 2.911

4.  Structural Characterization of Rat Galectin-5, an N-Tailed Monomeric Proto-Type-like Galectin.

Authors:  Federico M Ruiz; Francisco J Medrano; Anna-Kristin Ludwig; Herbert Kaltner; Nadezhda V Shilova; Nicolai V Bovin; Hans-Joachim Gabius; Antonio Romero
Journal:  Biomolecules       Date:  2021-12-09
  4 in total

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