Literature DB >> 21513372

Diffusion amid random overlapping obstacles: similarities, invariants, approximations.

Igor L Novak1, Fei Gao, Pavel Kraikivski, Boris M Slepchenko.   

Abstract

Efficient and accurate numerical techniques are used to examine similarities of effective diffusion in a void between random overlapping obstacles: essential invariance of effective diffusion coefficients (D(eff)) with respect to obstacle shapes and applicability of a two-parameter power law over nearly entire range of excluded volume fractions (φ), except for a small vicinity of a percolation threshold. It is shown that while neither of the properties is exact, deviations from them are remarkably small. This allows for quick estimation of void percolation thresholds and approximate reconstruction of D(eff) (φ) for obstacles of any given shape. In 3D, the similarities of effective diffusion yield a simple multiplication "rule" that provides a fast means of estimating D(eff) for a mixture of overlapping obstacles of different shapes with comparable sizes.

Mesh:

Year:  2011        PMID: 21513372      PMCID: PMC3094463          DOI: 10.1063/1.3578684

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  18 in total

1.  Reconstructing complex materials via effective grain shapes.

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3.  Theory of diffusion in gels.

Authors:  M A LAUFFER
Journal:  Biophys J       Date:  1961-01       Impact factor: 4.033

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5.  Void percolation and conduction of overlapping ellipsoids.

Authors:  Y B Yi
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6.  Asymmetry in the percolation thresholds of fully penetrable disks with two different radii.

Authors:  John A Quintanilla; Robert M Ziff
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Journal:  J Chem Phys       Date:  2008-04-28       Impact factor: 3.488

8.  Excluded-volume explanation of Archie's law.

Authors: 
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9.  Percolation properties of random ellipses.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1988-09-01

10.  Universal conductivity curve for a plane containing random holes.

Authors: 
Journal:  Phys Rev A       Date:  1991-06-15       Impact factor: 3.140

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2.  Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology.

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