Literature DB >> 21511457

Alternative splicing takes shape during neuronal development.

Paula Grabowski1.   

Abstract

The spatial and temporal control of alternative splicing is a major mechanism used to generate proteomic diversity in the brain. Microarray and Next Generation Sequencing approaches reveal mechanistic insights about networks of tissue-specific RNA binding proteins and micro RNAs that coordinate suites of alternative splicing patterns during neuronal differentiation. In the context of large-scale changes, one alternative splicing switch during embryonic brain development is crucial for neuronal migration and the laminar organization of the cerebral cortex. A major challenge to understand alternative splicing at the systems level is now being approached by the design of integrative modeling approaches that predict the combinatorial control of brain-specific exons.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21511457     DOI: 10.1016/j.gde.2011.03.005

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  43 in total

Review 1.  Long non-coding RNAs in corticogenesis: deciphering the non-coding code of the brain.

Authors:  Julieta Aprea; Federico Calegari
Journal:  EMBO J       Date:  2015-10-29       Impact factor: 11.598

2.  Detection of alternative splicing during epithelial-mesenchymal transition.

Authors:  Huilin Huang; Yilin Xu; Chonghui Cheng
Journal:  J Vis Exp       Date:  2014-10-09       Impact factor: 1.355

Review 3.  Evolutionary conservation and expression of human RNA-binding proteins and their role in human genetic disease.

Authors:  Stefanie Gerstberger; Markus Hafner; Manuel Ascano; Thomas Tuschl
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

4.  Reovirus-mediated induction of ADAR1 (p150) minimally alters RNA editing patterns in discrete brain regions.

Authors:  Jennifer L Hood; Michael V Morabito; Charles R Martinez; James A Gilbert; Elizabeth A Ferrick; Gregory D Ayers; James D Chappell; Terence S Dermody; Ronald B Emeson
Journal:  Mol Cell Neurosci       Date:  2014-06-04       Impact factor: 4.314

Review 5.  Alternative splicing: functional diversity among voltage-gated calcium channels and behavioral consequences.

Authors:  Diane Lipscombe; Arturo Andrade; Summer E Allen
Journal:  Biochim Biophys Acta       Date:  2012-09-26

Review 6.  Functional consequences of developmentally regulated alternative splicing.

Authors:  Auinash Kalsotra; Thomas A Cooper
Journal:  Nat Rev Genet       Date:  2011-09-16       Impact factor: 53.242

7.  Identification of novel splice variants and exons of human endothelial cell-specific chemotaxic regulator (ECSCR) by bioinformatics analysis.

Authors:  Jia Lu; Chaokun Li; Chunwei Shi; James Balducci; Hanju Huang; Hong-Long Ji; Yongchang Chang; Yao Huang
Journal:  Comput Biol Chem       Date:  2012-10-23       Impact factor: 2.877

8.  Multifunctional RNA processing protein SRm160 induces apoptosis and regulates eye and genital development in Drosophila.

Authors:  Yu-Jie Fan; Aryn H Gittis; François Juge; Chen Qiu; Yong-Zhen Xu; Leonard Rabinow
Journal:  Genetics       Date:  2014-06-06       Impact factor: 4.562

9.  Conditional control of alternative splicing through light-triggered splice-switching oligonucleotides.

Authors:  James Hemphill; Qingyang Liu; Rajendra Uprety; Subhas Samanta; Michael Tsang; Rudolph L Juliano; Alexander Deiters
Journal:  J Am Chem Soc       Date:  2015-03-03       Impact factor: 15.419

Review 10.  Roles for RNA-binding proteins in development and disease.

Authors:  Amy E Brinegar; Thomas A Cooper
Journal:  Brain Res       Date:  2016-03-10       Impact factor: 3.252

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