Literature DB >> 21505520

Suppression of cryptic intragenic transcripts is required for embryonic stem cell self-renewal.

Chia-Hui Lin1, Jerry L Workman.   

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Year:  2011        PMID： 21505520      PMCID： PMC3102269          DOI： 10.1038/emboj.2011.99

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


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  11 in total

1.  The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation.

Authors:  Nevan J Krogan; Jim Dover; Adam Wood; Jessica Schneider; Jonathan Heidt; Marry Ann Boateng; Kimberly Dean; Owen W Ryan; Ashkan Golshani; Mark Johnston; Jack F Greenblatt; Ali Shilatifard
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

2.  Core transcriptional regulatory circuitry in human embryonic stem cells.

Authors:  Laurie A Boyer; Tong Ihn Lee; Megan F Cole; Sarah E Johnstone; Stuart S Levine; Jacob P Zucker; Matthew G Guenther; Roshan M Kumar; Heather L Murray; Richard G Jenner; David K Gifford; Douglas A Melton; Rudolf Jaenisch; Richard A Young
Journal:  Cell       Date:  2005-09-23       Impact factor: 41.582

Review 3.  The role of chromatin during transcription.

Authors:  Bing Li; Michael Carey; Jerry L Workman
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

4.  Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells.

Authors:  Yuin-Han Loh; Weiwei Zhang; Xi Chen; Joshy George; Huck-Hui Ng
Journal:  Genes Dev       Date:  2007-10-15       Impact factor: 11.361

5.  KDM5B regulates embryonic stem cell self-renewal and represses cryptic intragenic transcription.

Authors:  Liangqi Xie; Carl Pelz; Wensi Wang; Amir Bashar; Olga Varlamova; Sean Shadle; Soren Impey
Journal:  EMBO J       Date:  2011-03-29       Impact factor: 11.598

6.  Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors:  Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

7.  RBP2 is an MRG15 complex component and down-regulates intragenic histone H3 lysine 4 methylation.

Authors:  Tomohiro Hayakawa; Yasuko Ohtani; Noriyo Hayakawa; Kaori Shinmyozu; Motoki Saito; Fuyuki Ishikawa; Jun-ichi Nakayama
Journal:  Genes Cells       Date:  2007-06       Impact factor: 1.891

8.  The histone demethylase KDM5b/JARID1b plays a role in cell fate decisions by blocking terminal differentiation.

Authors:  Bijan K Dey; Leanne Stalker; Angelique Schnerch; Mickie Bhatia; Joyce Taylor-Papidimitriou; Christopher Wynder
Journal:  Mol Cell Biol       Date:  2008-06-30       Impact factor: 4.272

9.  Coordinated regulation of transcriptional repression by the RBP2 H3K4 demethylase and Polycomb-Repressive Complex 2.

Authors:  Diego Pasini; Klaus H Hansen; Jesper Christensen; Karl Agger; Paul A C Cloos; Kristian Helin
Journal:  Genes Dev       Date:  2008-05-15       Impact factor: 11.361

10.  The H3K4 demethylase lid associates with and inhibits histone deacetylase Rpd3.

Authors:  Nara Lee; Hediye Erdjument-Bromage; Paul Tempst; Richard S Jones; Yi Zhang
Journal:  Mol Cell Biol       Date:  2008-12-29       Impact factor: 4.272
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  3 in total

1.  On the origin and evolutionary consequences of gene body DNA methylation.

Authors:  Adam J Bewick; Lexiang Ji; Chad E Niederhuth; Eva-Maria Willing; Brigitte T Hofmeister; Xiuling Shi; Li Wang; Zefu Lu; Nicholas A Rohr; Benjamin Hartwig; Christiane Kiefer; Roger B Deal; Jeremy Schmutz; Jane Grimwood; Hume Stroud; Steven E Jacobsen; Korbinian Schneeberger; Xiaoyu Zhang; Robert J Schmitz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-25       Impact factor: 11.205

2.  Casein kinase 2 associates with the yeast chromatin reassembly factor Spt2/Sin1 to regulate its function in the repression of spurious transcription.

Authors:  Wajid Bhat; Geneviève Boutin; Anne Rufiange; Amine Nourani
Journal:  Mol Cell Biol       Date:  2013-08-26       Impact factor: 4.272

3.  Single-cell expression noise and gene-body methylation in Arabidopsis thaliana.

Authors:  Robert Horvath; Benjamin Laenen; Shohei Takuno; Tanja Slotte
Journal:  Heredity (Edinb)       Date:  2019-01-16       Impact factor: 3.821
  3 in total

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