Literature DB >> 21499228

Structural biochemistry of nuclear actin-related proteins 4 and 8 reveals their interaction with actin.

Sebastian Fenn1, Dennis Breitsprecher, Christian B Gerhold, Gregor Witte, Jan Faix, Karl-Peter Hopfner.   

Abstract

Nuclear actin and actin-related proteins (Arps) are integral components of various chromatin-remodelling complexes. Actin in such nuclear assemblies does not form filaments but associates in defined complexes, for instance with Arp4 and Arp8 in the INO80 remodeller. To understand the relationship between nuclear actin and its associated Arps and to test the possibility that Arp4 and Arp8 help maintain actin in defined states, we structurally analysed Arp4 and Arp8 from Saccharomyces cerevisiae and tested their biochemical effects on actin assembly and disassembly. The solution structures of isolated Arp4 and Arp8 indicate them to be monomeric and the crystal structure of ATP-Arp4 reveals several differences to actin that explain why Arp4 does not form filaments itself. Remarkably, Arp4, assisted by Arp8, influences actin polymerization in vitro and is able to depolymerize actin filaments. Arp4 likely forms a complex with monomeric actin via the barbed end. Our data thus help explaining how nuclear actin is held in a discrete complex within the INO80 chromatin remodeller.

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Year:  2011        PMID: 21499228      PMCID: PMC3117639          DOI: 10.1038/emboj.2011.118

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  50 in total

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Authors:  Vincent Dion; Kenji Shimada; Susan M Gasser
Journal:  Curr Opin Cell Biol       Date:  2010-03-18       Impact factor: 8.382

2.  Regulation of RNA-polymerase-II-dependent transcription by N-WASP and its nuclear-binding partners.

Authors:  Xiaoyang Wu; Youngdong Yoo; Nataly N Okuhama; Philip W Tucker; Gang Liu; Jun-Lin Guan
Journal:  Nat Cell Biol       Date:  2006-06-11       Impact factor: 28.824

3.  Crystal structures of expressed non-polymerizable monomeric actin in the ADP and ATP states.

Authors:  Mark A Rould; Qun Wan; Peteranne B Joel; Susan Lowey; Kathleen M Trybus
Journal:  J Biol Chem       Date:  2006-08-18       Impact factor: 5.157

4.  Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling.

Authors:  K Zhao; W Wang; O J Rando; Y Xue; K Swiderek; A Kuo; G R Crabtree
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5.  The role of profilin in actin polymerization and nucleotide exchange.

Authors:  E Korenbaum; P Nordberg; C Björkegren-Sjögren; C E Schutt; U Lindberg; R Karlsson
Journal:  Biochemistry       Date:  1998-06-30       Impact factor: 3.162

6.  Direct measurement of critical concentrations and assembly rate constants at the two ends of an actin filament.

Authors:  E M Bonder; D J Fishkind; M S Mooseker
Journal:  Cell       Date:  1983-09       Impact factor: 41.582

7.  Nuclear actin and protein 4.1: essential interactions during nuclear assembly in vitro.

Authors:  Sharon Wald Krauss; Cynthia Chen; Sheldon Penman; Rebecca Heald
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-05       Impact factor: 11.205

8.  An essential gene of Saccharomyces cerevisiae coding for an actin-related protein.

Authors:  M Harata; A Karwan; U Wintersberger
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-16       Impact factor: 11.205

9.  Cofactor requirements for nuclear export of Rev response element (RRE)- and constitutive transport element (CTE)-containing retroviral RNAs. An unexpected role for actin.

Authors:  W Hofmann; B Reichart; A Ewald; E Müller; I Schmitt; R H Stauber; F Lottspeich; B M Jockusch; U Scheer; J Hauber; M C Dabauvalle
Journal:  J Cell Biol       Date:  2001-03-05       Impact factor: 10.539

10.  Phaser crystallographic software.

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  45 in total

1.  Nuclear actin-related proteins take shape.

Authors:  Sebastian Fenn; Christian B Gerhold; Karl-Peter Hopfner
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Review 2.  Actin, actin-binding proteins, and actin-related proteins in the nucleus.

Authors:  Ildikó Kristó; Izabella Bajusz; Csaba Bajusz; Péter Borkúti; Péter Vilmos
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

Review 3.  To be or not to be assembled: progressing into nuclear actin filaments.

Authors:  Robert Grosse; Maria K Vartiainen
Journal:  Nat Rev Mol Cell Biol       Date:  2013-10-03       Impact factor: 94.444

4.  Arp you ready for actin in the nucleus?

Authors:  David J Kast; Roberto Dominguez
Journal:  EMBO J       Date:  2011-06-01       Impact factor: 11.598

5.  Nucleoskeletal regulation of transcription: Actin on MRTF.

Authors:  Ekaterina Sidorenko; Maria K Vartiainen
Journal:  Exp Biol Med (Maywood)       Date:  2019-05-29

Review 6.  Nuclear actin: ancient clue to evolution in eukaryotes?

Authors:  Csaba Bajusz; Péter Borkúti; Ildikó Kristó; Zoltán Kovács; Csilla Abonyi; Péter Vilmos
Journal:  Histochem Cell Biol       Date:  2018-07-17       Impact factor: 4.304

7.  Insertions within the actin core of actin-related protein 3 (Arp3) modulate branching nucleation by Arp2/3 complex.

Authors:  Su-Ling Liu; Jordan R May; Luke A Helgeson; Brad J Nolen
Journal:  J Biol Chem       Date:  2012-11-12       Impact factor: 5.157

8.  Structure of an actin-related subcomplex of the SWI/SNF chromatin remodeler.

Authors:  Heidi L Schubert; Jacqueline Wittmeyer; Margaret M Kasten; Kaede Hinata; David C Rawling; Annie Héroux; Bradley R Cairns; Christopher P Hill
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

9.  Monomeric actin required for INO80 remodeling.

Authors:  Blaine Bartholomew
Journal:  Nat Struct Mol Biol       Date:  2013-04       Impact factor: 15.369

10.  Crystal structure of a nuclear actin ternary complex.

Authors:  Tingting Cao; Lingfei Sun; Yuxiang Jiang; Shanjin Huang; Jiawei Wang; Zhucheng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-25       Impact factor: 11.205

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