Literature DB >> 21496032

Environmental metabolomics links genotype to phenotype and predicts genotype abundance in wild plant populations.

Katie J Field1, Janice A Lake.   

Abstract

'The Holy Grail' of plant ecology is to uncover rules that associate species and traits with environmental constraints, community composition and subsequent ecosystem functioning. These aims have been crystallized in recent years within the context of global climate change and environmental pollution, increasing the urgency of the need to predict how vegetation will respond across spatial scales. We investigated whether genetic diversity is associated with the way in which phenotypic plasticity within plant populations is realized and whether this is related to genotype abundance. We used environmental metabolomics to demonstrate biochemical variation between co-occurring genotypes of Carex caryophyllea L. A novel combined metabolomic/functional trait analysis was used to test the functionality of this variation in governing plasticity to variation in edaphic conditions, with particular reference to metabolic pathways that play important roles in growth-related traits. We show that genetic diversity within a wild C. caryophyllea population relates to differences in metabolic composition and functional traits in response to soil nutrient variation, influencing genotype abundance within a community. Our findings highlight the vital role genetic diversity plays within a population in facilitating plant phenotypic plasticity and the potential usefulness of environmental metabolomics to future ecological studies.
Copyright © Physiologia Plantarum 2011.

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Year:  2011        PMID: 21496032     DOI: 10.1111/j.1399-3054.2011.01480.x

Source DB:  PubMed          Journal:  Physiol Plant        ISSN: 0031-9317            Impact factor:   4.500


  10 in total

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Journal:  Plant Physiol       Date:  2015-02-10       Impact factor: 8.340

2.  Application of 1H-NMR metabolomic profiling for reef-building corals.

Authors:  Emilia M Sogin; Paul Anderson; Philip Williams; Chii-Shiarng Chen; Ruth D Gates
Journal:  PLoS One       Date:  2014-10-29       Impact factor: 3.240

3.  The chemical signatures underlying host plant discrimination by aphids.

Authors:  David P Hopkins; Duncan D Cameron; Roger K Butlin
Journal:  Sci Rep       Date:  2017-08-17       Impact factor: 4.379

Review 4.  Current Challenges in Plant Eco-Metabolomics.

Authors:  Kristian Peters; Anja Worrich; Alexander Weinhold; Oliver Alka; Gerd Balcke; Claudia Birkemeyer; Helge Bruelheide; Onno W Calf; Sophie Dietz; Kai Dührkop; Emmanuel Gaquerel; Uwe Heinig; Marlen Kücklich; Mirka Macel; Caroline Müller; Yvonne Poeschl; Georg Pohnert; Christian Ristok; Victor Manuel Rodríguez; Christoph Ruttkies; Meredith Schuman; Rabea Schweiger; Nir Shahaf; Christoph Steinbeck; Maria Tortosa; Hendrik Treutler; Nico Ueberschaar; Pablo Velasco; Brigitte M Weiß; Anja Widdig; Steffen Neumann; Nicole M van Dam
Journal:  Int J Mol Sci       Date:  2018-05-06       Impact factor: 5.923

5.  Genetic and metabolomic architecture of variation in diet restriction-mediated lifespan extension in Drosophila.

Authors:  Kelly Jin; Kenneth A Wilson; Jennifer N Beck; Christopher S Nelson; George W Brownridge; Benjamin R Harrison; Danijel Djukovic; Daniel Raftery; Rachel B Brem; Shiqing Yu; Mathias Drton; Ali Shojaie; Pankaj Kapahi; Daniel Promislow
Journal:  PLoS Genet       Date:  2020-07-09       Impact factor: 5.917

6.  Computational workflow to study the seasonal variation of secondary metabolites in nine different bryophytes.

Authors:  Kristian Peters; Karin Gorzolka; Helge Bruelheide; Steffen Neumann
Journal:  Sci Data       Date:  2018-08-28       Impact factor: 6.444

7.  Antibacterial, antioxidant and tyrosinase-inhibition activities of pomegranate fruit peel methanolic extract.

Authors:  Olaniyi A Fawole; Nokwanda P Makunga; Umezuruike Linus Opara
Journal:  BMC Complement Altern Med       Date:  2012-10-30       Impact factor: 3.659

8.  Integrated 'Omics', Targeted Metabolite and Single-cell Analyses of Arctic Snow Algae Functionality and Adaptability.

Authors:  Stefanie Lutz; Alexandre M Anesio; Katie Field; Liane G Benning
Journal:  Front Microbiol       Date:  2015-11-25       Impact factor: 5.640

9.  Fusarium inhibition by wild populations of the medicinal plant Salvia africana-lutea L. linked to metabolomic profiling.

Authors:  Mpumelelo M Nkomo; David D R Katerere; Hester H F Vismer; Thomas T Cruz; Stephane S Balayssac; Myriam M Malet-Martino; Nokwanda N P Makunga
Journal:  BMC Complement Altern Med       Date:  2014-03-13       Impact factor: 3.659

10.  Metabolomics Analysis of the Deterioration Mechanism and Storage Time Limit of Tender Coconut Water during Storage.

Authors:  Yunwu Zhang; Wenxue Chen; Haiming Chen; Qiuping Zhong; Yonghuan Yun; Weijun Chen
Journal:  Foods       Date:  2020-01-03
  10 in total

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