Literature DB >> 21490301

p66Alpha-MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2-NuRD complex.

Merlin Nithya Gnanapragasam1, J Neel Scarsdale, Maria L Amaya, Heather D Webb, Megha A Desai, Ninad M Walavalkar, Shou Zhen Wang, Sheng Zu Zhu, Gordon D Ginder, David C Williams.   

Abstract

Nucleosome remodeling complexes comprise several large families of chromatin modifiers that integrate multiple epigenetic control signals to play key roles in cell type-specific transcription regulation. We previously isolated a methyl-binding domain protein 2 (MBD2)-containing nucleosome remodeling and deacetylation (NuRD) complex from primary erythroid cells and showed that MBD2 contributes to DNA methylation-dependent embryonic and fetal β-type globin gene silencing during development in vivo. Here we present structural and biophysical details of the coiled-coil interaction between MBD2 and p66α, a critical component of the MBD2-NuRD complex. We show that enforced expression of the isolated p66α coiled-coil domain relieves MBD2-mediated globin gene silencing and that the expressed peptide interacts only with a subset of components of the MBD2-NuRD complex that does not include native p66α or Mi-2. These results demonstrate the central importance of the coiled-coil interaction and suggest that MBD2-dependent DNA methylation-driven gene silencing can be disrupted by selectively targeting this coiled-coil complex.

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Year:  2011        PMID: 21490301      PMCID: PMC3088629          DOI: 10.1073/pnas.1015341108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation.

Authors:  Y Zhang; H H Ng; H Erdjument-Bromage; P Tempst; A Bird; D Reinberg
Journal:  Genes Dev       Date:  1999-08-01       Impact factor: 11.361

2.  Vector geometry mapping. A method to characterize the conformation of helix-loop-helix calcium-binding proteins.

Authors:  Kyoko L Yap; James B Ames; Mark B Swindells; Mitsuhiko Ikura
Journal:  Methods Mol Biol       Date:  2002

3.  The Xplor-NIH NMR molecular structure determination package.

Authors:  Charles D Schwieters; John J Kuszewski; Nico Tjandra; G Marius Clore
Journal:  J Magn Reson       Date:  2003-01       Impact factor: 2.229

Review 4.  The role of the epigenetic signal, DNA methylation, in gene regulation during erythroid development.

Authors:  Gordon D Ginder; Merlin N Gnanapragasam; Omar Y Mian
Journal:  Curr Top Dev Biol       Date:  2008       Impact factor: 4.897

Review 5.  The human Mi-2/NuRD complex and gene regulation.

Authors:  S A Denslow; P A Wade
Journal:  Oncogene       Date:  2007-08-13       Impact factor: 9.867

6.  Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs.

Authors:  R R Meehan; J D Lewis; S McKay; E L Kleiner; A P Bird
Journal:  Cell       Date:  1989-08-11       Impact factor: 41.582

7.  {gamma}-Globin gene expression in chemical inducer of dimerization (CID)-dependent multipotential cells established from human {beta}-globin locus yeast artificial chromosome ({beta}-YAC) transgenic mice.

Authors:  C Anthony Blau; Carlos F Barbas; Anna L Bomhoff; Renee Neades; James Yan; Patrick A Navas; Kenneth R Peterson
Journal:  J Biol Chem       Date:  2005-08-30       Impact factor: 5.157

Review 8.  The epigenomics of cancer.

Authors:  Peter A Jones; Stephen B Baylin
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 9.  Cancer as a manifestation of aberrant chromatin structure.

Authors:  Malcolm V Brock; James G Herman; Stephen B Baylin
Journal:  Cancer J       Date:  2007 Jan-Feb       Impact factor: 3.360

10.  p66alpha and p66beta of the Mi-2/NuRD complex mediate MBD2 and histone interaction.

Authors:  Marc Brackertz; Zihua Gong; Jörg Leers; Rainer Renkawitz
Journal:  Nucleic Acids Res       Date:  2006-01-13       Impact factor: 16.971

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  53 in total

1.  Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci.

Authors:  John F Fullard; Claudia Giambartolomei; Mads E Hauberg; Ke Xu; Georgios Voloudakis; Zhiping Shao; Christopher Bare; Joel T Dudley; Manuel Mattheisen; Nikolaos K Robakis; Vahram Haroutunian; Panos Roussos
Journal:  Hum Mol Genet       Date:  2017-05-15       Impact factor: 6.150

Review 2.  Mi-2/NuRD chromatin remodeling complexes regulate B and T-lymphocyte development and function.

Authors:  Carissa Dege; James Hagman
Journal:  Immunol Rev       Date:  2014-09       Impact factor: 12.988

3.  Original Research: Stable expression of miR-34a mediates fetal hemoglobin induction in K562 cells.

Authors:  Christina M Ward; Biaoru Li; Betty S Pace
Journal:  Exp Biol Med (Maywood)       Date:  2016-03-02

4.  An intrinsically disordered region of methyl-CpG binding domain protein 2 (MBD2) recruits the histone deacetylase core of the NuRD complex.

Authors:  Megha A Desai; Heather D Webb; Leander M Sinanan; J Neel Scarsdale; Ninad M Walavalkar; Gordon D Ginder; David C Williams
Journal:  Nucleic Acids Res       Date:  2015-03-09       Impact factor: 16.971

5.  Dissecting the behavior and function of MBD3 in DNA methylation homeostasis by single-molecule spectroscopy and microscopy.

Authors:  Yi Cui; Joseph Irudayaraj
Journal:  Nucleic Acids Res       Date:  2015-03-09       Impact factor: 16.971

6.  Intrinsically disordered linkers control tethered kinases via effective concentration.

Authors:  Mateusz Dyla; Magnus Kjaergaard
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-18       Impact factor: 11.205

7.  Mi2β-mediated silencing of the fetal γ-globin gene in adult erythroid cells.

Authors:  Maria Amaya; Megha Desai; Merlin Nithya Gnanapragasam; Shou Zhen Wang; Sheng Zu Zhu; David C Williams; Gordon D Ginder
Journal:  Blood       Date:  2013-02-26       Impact factor: 22.113

8.  MBD2 and multiple domains of CHD4 are required for transcriptional repression by Mi-2/NuRD complexes.

Authors:  Julita Ramírez; Carissa Dege; Tatiana G Kutateladze; James Hagman
Journal:  Mol Cell Biol       Date:  2012-10-15       Impact factor: 4.272

Review 9.  Hemoglobin genetics: recent contributions of GWAS and gene editing.

Authors:  Elenoe C Smith; Stuart H Orkin
Journal:  Hum Mol Genet       Date:  2016-06-23       Impact factor: 6.150

Review 10.  The NuRD architecture.

Authors:  Hillary F Allen; Paul A Wade; Tatiana G Kutateladze
Journal:  Cell Mol Life Sci       Date:  2013-01-23       Impact factor: 9.261

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