Literature DB >> 21482528

[Analysis of expressed sequence tags (ESTs) in sika deer (Cervus nippon hortulorum) velvet tip tissue].

Li Hao1, He-Ping Li, Li Yan.   

Abstract

A total of 906 high quality ESTs were obtained through random sequencing from velvet tip tissue cDNA library of Sika Deer (Cervus nippon hortulorum). Clustering of 906 ESTs resulted in a set of 701 unigenes comprising of 86 contigs and 615 singletons. BLAST analysis revealed that 580 unigenes (82.7% of all 701 unigenes) were matched to the known genes or putative genes in public databases, which could be classified into molecular function, biological process or cellular component according to the Gene Ontology (GO) classifications. Thirty-nine unigenes were identified to be growth and development-related genes. This study provides the data available for NCBI public database of the deer genome.

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Year:  2011        PMID: 21482528     DOI: 10.3724/sp.j.1005.2011.00371

Source DB:  PubMed          Journal:  Yi Chuan        ISSN: 0253-9772


  2 in total

1.  Transcriptome analysis of sika deer in China.

Authors:  Bo-Yin Jia; Heng-Xing Ba; Gui-Wu Wang; Ying Yang; Xue-Zhe Cui; Ying-Hua Peng; Jun-Jun Zheng; Xiu-Mei Xing; Fu-He Yang
Journal:  Mol Genet Genomics       Date:  2016-07-16       Impact factor: 3.291

2.  Identification and Characterization of Alternative Splicing Variants and Positive Selection Genes Related to Distinct Growth Rates of Antlers Using Comparative Transcriptome Sequencing.

Authors:  Pengfei Hu; Zhen Wang; Jiping Li; Dongxu Wang; Yusu Wang; Quanmin Zhao; Chunyi Li
Journal:  Animals (Basel)       Date:  2022-08-26       Impact factor: 3.231

  2 in total

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