Literature DB >> 21478353

Whole-genome sequences of four Mycobacterium bovis BCG vaccine strains.

Yuanlong Pan1, Xi Yang, Jia Duan, Na Lu, Andrea S Leung, Vanessa Tran, Yongfei Hu, Na Wu, Di Liu, Zhiming Wang, Xuping Yu, Chen Chen, Yuanyuan Zhang, Kanglin Wan, Jun Liu, Baoli Zhu.   

Abstract

Mycobacterium bovis Bacille Calmette-Guérin (BCG) is the only vaccine available against tuberculosis (TB). A number of BCG strains are in use, and they exhibit biochemical and genetic differences. We report the genome sequences of four BCG strains representing different lineages, which will help to design more effective TB vaccines.

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Year:  2011        PMID： 21478353      PMCID： PMC3133212          DOI： 10.1128/JB.00405-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

1.  The KEGG resource for deciphering the genome.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Yasushi Okuno; Masahiro Hattori
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  Tandem repeats finder: a program to analyze DNA sequences.

Authors:  G Benson
Journal:  Nucleic Acids Res       Date:  1999-01-15       Impact factor: 16.971

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Genome plasticity of BCG and impact on vaccine efficacy.

Authors:  Roland Brosch; Stephen V Gordon; Thierry Garnier; Karin Eiglmeier; Wafa Frigui; Philippe Valenti; Sandrine Dos Santos; Stéphanie Duthoy; Céline Lacroix; Carmen Garcia-Pelayo; Jacqueline K Inwald; Paul Golby; Javier Nuñez Garcia; R Glyn Hewinson; Marcel A Behr; Michael A Quail; Carol Churcher; Bart G Barrell; Julian Parkhill; Stewart T Cole
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

6.  Comparative genomics of BCG vaccines by whole-genome DNA microarray.

Authors:  M A Behr; M A Wilson; W P Gill; H Salamon; G K Schoolnik; S Rane; P M Small
Journal:  Science       Date:  1999-05-28       Impact factor: 47.728

7.  The complete genome sequence of Mycobacterium bovis.

Authors:  Thierry Garnier; Karin Eiglmeier; Jean-Christophe Camus; Nadine Medina; Huma Mansoor; Melinda Pryor; Stephanie Duthoy; Sophie Grondin; Celine Lacroix; Christel Monsempe; Sylvie Simon; Barbara Harris; Rebecca Atkin; Jon Doggett; Rebecca Mayes; Lisa Keating; Paul R Wheeler; Julian Parkhill; Bart G Barrell; Stewart T Cole; Stephen V Gordon; R Glyn Hewinson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-03       Impact factor: 11.205

Review 8.  The second Geneva Consensus: Recommendations for novel live TB vaccines.

Authors:  K B Walker; M J Brennan; M M Ho; J Eskola; G Thiry; J Sadoff; R Dobbelaer; L Grode; M A Liu; U Fruth; P H Lambert
Journal:  Vaccine       Date:  2010-01-20       Impact factor: 3.641

9.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

Authors:  S T Cole; R Brosch; J Parkhill; T Garnier; C Churcher; D Harris; S V Gordon; K Eiglmeier; S Gas; C E Barry; F Tekaia; K Badcock; D Basham; D Brown; T Chillingworth; R Connor; R Davies; K Devlin; T Feltwell; S Gentles; N Hamlin; S Holroyd; T Hornsby; K Jagels; A Krogh; J McLean; S Moule; L Murphy; K Oliver; J Osborne; M A Quail; M A Rajandream; J Rogers; S Rutter; K Seeger; J Skelton; R Squares; S Squares; J E Sulston; K Taylor; S Whitehead; B G Barrell
Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
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  9 in total

1.  Genome sequence of Mycobacterium bovis BCG Moreau, the Brazilian vaccine strain against tuberculosis.

Authors:  Leonardo H F Gomes; Thomas D Otto; Erico A Vasconcellos; Patrícia M Ferrão; Renata M Maia; Aline S Moreira; Marcelo A Ferreira; Luiz R R Castello-Branco; Wim M Degrave; Leila Mendonça-Lima
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

2.  Comparative Analysis of Human B Cell Epitopes Based on BCG Genomes.

Authors:  Machao Li; Haican Liu; Xiuqin Zhao; Kanglin Wan
Journal:  Biomed Res Int       Date:  2016-06-12       Impact factor: 3.411

3.  Comparative Proteomic Profiling of Mycobacterium tuberculosis and the Thai Vaccine Strain Mycobacterium bovis Bacille Calmette-Guerin Tokyo172: Diverse Biomarker Candidates for Species Differentiation.

Authors:  Songsri Kasempimolporn; Pornpimol Premchaiporn; Wichit Thaveekarn; Supatsorn Boonchang; Visith Sitprija
Journal:  J Glob Infect Dis       Date:  2018 Oct-Dec

4.  Identification and whole-genome sequencing analysis of Vibrio vulnificus strains causing pearl gentian grouper disease in China.

Authors:  Zun Wu; Yating Wu; Haofeng Gao; Xuexin He; Qiang Yao; Zhanglei Yang; Jinyi Zhou; Linting Ji; Jinwei Gao; Xuying Jia; Yong Dou; Xiaoyu Wang; Peng Shao
Journal:  BMC Microbiol       Date:  2022-08-16       Impact factor: 4.465

5.  Complete Genome Sequence of Mycobacterium bovis BCG Korea, the Korean Vaccine Strain for Substantial Production.

Authors:  Sun Myung Joung; Sung Joo Jeon; Young Ju Lim; Jong-Sung Lim; Beom-Soon Choi; Ik-Young Choi; Jeong Hee Yu; Kyung-In Na; En-Hi Cho; Sang-Sook Shin; Young Kil Park; Chang-Ki Kim; Hee-Jin Kim; Sung Weon Ryoo
Journal:  Genome Announc       Date:  2013-03-14

6.  Pre-clinical development of BCG.HIVA(CAT), an antibiotic-free selection strain, for HIV-TB pediatric vaccine vectored by lysine auxotroph of BCG.

Authors:  Narcís Saubi; Alice Mbewe-Mvula; Ester Gea-Mallorqui; Maximillian Rosario; Josep Maria Gatell; Tomáš Hanke; Joan Joseph
Journal:  PLoS One       Date:  2012-08-21       Impact factor: 3.240

7.  First Whole-Genome Sequence of a Clinical Isolate of Multidrug-Resistant Mycobacterium bovis BCG.

Authors:  A Renvoisé; S Pang; C Bernard; F Brossier; N Veziris; E Capton; V Jarlier; W Sougakoff
Journal:  Genome Announc       Date:  2014-07-10

8.  Variable Virulence and Efficacy of BCG Vaccine Strains in Mice and Correlation With Genome Polymorphisms.

Authors:  Lu Zhang; Huan-Wei Ru; Fu-Zeng Chen; Chun-Yan Jin; Rui-Feng Sun; Xiao-Yong Fan; Ming Guo; Jun-Tao Mai; Wen-Xi Xu; Qing-Xia Lin; Jun Liu
Journal:  Mol Ther       Date:  2015-12-08       Impact factor: 11.454

9.  First insight into the whole-genome sequence variations in Mycobacterium bovis BCG-1 (Russia) vaccine seed lots and their progeny clinical isolates from children with BCG-induced adverse events.

Authors:  Olga Narvskaya; Daria Starkova; Diana Levi; Natalia Alexandrova; Vladimir Molchanov; Ekaterina Chernyaeva; Anna Vyazovaya; Alexander Mushkin; Viacheslav Zhuravlev; Natalia Solovieva; Boris Vishnevskiy; Igor Mokrousov
Journal:  BMC Genomics       Date:  2020-08-18       Impact factor: 3.969
  9 in total

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