Literature DB >> 21474317

The dynamic state of protein turnover: It's about time.

Izumi V Hinkson1, Joshua E Elias.   

Abstract

The continual destruction and renewal of proteins that maintain cellular homeostasis has been rigorously studied since the late 1930s. Experimental techniques for measuring protein turnover have evolved to measure the dynamic regulation of key proteins and now, entire proteomes. In the past decade, the proteomics field has aimed to discover how cells adjust their proteomes to execute numerous regulatory programs in response to specific cellular and environmental cues. By combining classical biochemical techniques with modern, high-throughput technologies, researchers have begun to reveal the synthesis and degradation mechanisms that shape protein turnover on a global scale. This review examines several recent developments in protein turnover research, emphasizing the combination of metabolic labeling and mass spectrometry.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21474317     DOI: 10.1016/j.tcb.2011.02.002

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  52 in total

1.  Prolonged α-amanitin treatment of cells for studying mutated polymerases causes degradation of DSIF160 and other proteins.

Authors:  David C Tsao; Noh Jin Park; Anita Nag; Harold G Martinson
Journal:  RNA       Date:  2011-12-22       Impact factor: 4.942

2.  How are tonoplast proteins degraded?

Authors:  Marie Maîtrejean; Alessandro Vitale
Journal:  Plant Signal Behav       Date:  2011-11-01

3.  Stage-Specific Gene Profiling of Germinal Cells Helps Delineate the Mitosis/Meiosis Transition.

Authors:  Ting-Lu Yuan; Wei-Jie Huang; Juan He; Dong Zhang; Wei-Hua Tang
Journal:  Plant Physiol       Date:  2017-11-29       Impact factor: 8.340

4.  Kinetically distinct processing pathways diversify the CD8+ T cell response to a single viral epitope.

Authors:  Gabriela L Cosma; Jenna L Lobby; Elizabeth J Fay; Nicholas A Siciliano; Ryan A Langlois; Laurence C Eisenlohr
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-27       Impact factor: 11.205

5.  Degradation of protein translation machinery by amino acid starvation-induced macroautophagy.

Authors:  Christine Gretzmeier; Sven Eiselein; Gregory R Johnson; Rudolf Engelke; Heike Nowag; Mostafa Zarei; Victoria Küttner; Andrea C Becker; Kristoffer T G Rigbolt; Maria Høyer-Hansen; Jens S Andersen; Christian Münz; Robert F Murphy; Jörn Dengjel
Journal:  Autophagy       Date:  2017-04-28       Impact factor: 16.016

6.  Time-resolved Analysis of Proteome Dynamics by Tandem Mass Tags and Stable Isotope Labeling in Cell Culture (TMT-SILAC) Hyperplexing.

Authors:  Kevin A Welle; Tian Zhang; Jennifer R Hryhorenko; Shichen Shen; Jun Qu; Sina Ghaemmaghami
Journal:  Mol Cell Proteomics       Date:  2016-10-20       Impact factor: 5.911

7.  Linking post-translational modifications and variation of phenotypic traits.

Authors:  Warren Albertin; Philippe Marullo; Marina Bely; Michel Aigle; Aurélie Bourgais; Olivier Langella; Thierry Balliau; Didier Chevret; Benoît Valot; Telma da Silva; Christine Dillmann; Dominique de Vienne; Delphine Sicard
Journal:  Mol Cell Proteomics       Date:  2012-12-27       Impact factor: 5.911

8.  Measuring the dynamics of E. coli ribosome biogenesis using pulse-labeling and quantitative mass spectrometry.

Authors:  Stephen S Chen; Edit Sperling; Josh M Silverman; Joseph H Davis; James R Williamson
Journal:  Mol Biosyst       Date:  2012-10-30

9.  Simultaneous Quantitation of Glycoprotein Degradation and Synthesis Rates by Integrating Isotope Labeling, Chemical Enrichment, and Multiplexed Proteomics.

Authors:  Haopeng Xiao; Ronghu Wu
Journal:  Anal Chem       Date:  2017-09-13       Impact factor: 6.986

10.  Reconstitution Of β-catenin degradation in Xenopus egg extract.

Authors:  Tony W Chen; Matthew R Broadus; Stacey S Huppert; Ethan Lee
Journal:  J Vis Exp       Date:  2014-06-17       Impact factor: 1.355

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