Literature DB >> 21470681

Global gene expression and Ingenuity biological functions analysis on PCBs 153 and 138 induced human PBMC in vitro reveals differential mode(s) of action in developing toxicities.

Somiranjan Ghosh1, Shizhu Zang, Partha S Mitra, Svetlana Ghimbovschi, Eric P Hoffman, Sisir K Dutta.   

Abstract

Several reports have indicated that low level of polychlorinated biphenyl (PCB) exposure can adversely affect a multitude of physiological disorders and diseases in in vitro, in vivo, and as reported in epidemiological studies. This investigation is focused on the possible contribution of two most prevalent PCB congeners in vitro in developing toxicities. We used PCBs 138 and 153 at the human equivalence level as model agents to test their specificity in developing toxicities. We chose a global approach using oligonucleotide microarray technology to investigate modulated gene expression for biological effects, upon exposure of PCBs, followed by Ingenuity Pathway Analysis (IPA), to understand the underlying consequence in developing disease and disorders. We performed in vitro studies with human peripheral blood mononuclear cells (PBMC), where PBMC cells were exposed to respective PCBs for 48 h. Overall, our observation on gene expression indicated that PCB produces a unique signature affecting different pathways, specific for each congener. While analyzing these data through IPA, the prominent and interesting disease and disorders were neurological disease, cancer, cardiovascular disease, respiratory disease, as well as endocrine system disorders, genetic disorders, and reproductive system disease. They showed strong resemblances with in vitro, in vivo, and in the epidemiological studies. A distinct difference was observed in renal and urological diseases, organisimal injury and abnormalities, dental disease, ophthalmic disease, and psychological disorders, which are only revealed by PCB 138 exposure, but not in PCB 153. The present study emphasizes the challenges of global gene expression in vitro and was correlated with the results of exposed human population. The microarray results give a molecular mechanistic insight and functional effects, following PCB exposure. The extent of changes in genes related to several possible mode(s) of action highlights the changes in cellular functions and signaling pathways that play major roles. In addition to understanding the pathways related to mode of action for chemicals, these data could lead to the identification of genomic signatures that could be used for screening of chemicals for their potential to cause disease and developmental disorders.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21470681      PMCID: PMC3097535          DOI: 10.1016/j.envint.2011.02.010

Source DB:  PubMed          Journal:  Environ Int        ISSN: 0160-4120            Impact factor:   9.621


  85 in total

1.  Adipose tissue concentrations of persistent organic pollutants and the risk of prostate cancer.

Authors:  Lennart Hardell; Swen-Olof Andersson; Michael Carlberg; Louise Bohr; Bert van Bavel; Gunilla Lindström; Helen Björnfoth; Claes Ginman
Journal:  J Occup Environ Med       Date:  2006-07       Impact factor: 2.162

2.  Agreement between reported fish consumption obtained by two interviews and its impact on the results in a reproduction study.

Authors:  L Rylander; U Strömberg; L Hagmar
Journal:  Eur J Epidemiol       Date:  1998-01       Impact factor: 8.082

3.  Breast adipose tissue concentrations of polychlorinated biphenyls and other organochlorines and breast cancer risk.

Authors:  K J Aronson; A B Miller; C G Woolcott; E E Sterns; D R McCready; L A Lickley; E B Fish; G Y Hiraki; C Holloway; T Ross; W M Hanna; S K SenGupta; J P Weber
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2000-01       Impact factor: 4.254

4.  Limited effect of selected organic pollutants on cytokine production by peripheral blood leukocytes.

Authors:  Sabrina Devos; Rosette Van Den Heuvel; Robert Hooghe; Elisabeth L Hooghe-Peters
Journal:  Eur Cytokine Netw       Date:  2004 Apr-Jun       Impact factor: 2.737

5.  Prenatal polychlorinated biphenyl exposures in eastern Slovakia modify effects of social factors on birthweight.

Authors:  Dean Sonneborn; Hye-Youn Park; Jan Petrik; Anton Kocan; Lubica Palkovicova; Tomas Trnovec; Danh Nguyen; Irva Hertz-Picciotto
Journal:  Paediatr Perinat Epidemiol       Date:  2008-05       Impact factor: 3.980

6.  Analysis of PCB congeners related to cognitive functioning in adolescents.

Authors:  Joan Newman; Mia V Gallo; Lawrence M Schell; Anthony P DeCaprio; Melinda Denham; Glenn D Deane
Journal:  Neurotoxicology       Date:  2009-05-22       Impact factor: 4.294

Review 7.  Signaling pathways in spermatogonial stem cells and their disruption by toxicants.

Authors:  Benjamin Lucas; Christopher Fields; Marie-Claude Hofmann
Journal:  Birth Defects Res C Embryo Today       Date:  2009-03

8.  Exposure to PCBs and p,p'-DDE and human sperm chromatin integrity.

Authors:  Anna Rignell-Hydbom; Lars Rylander; Aleksander Giwercman; B A G Jönsson; Christian Lindh; Patrizia Eleuteri; Michele Rescia; Giorgio Leter; Eugenia Cordelli; Marcello Spano; Lars Hagmar
Journal:  Environ Health Perspect       Date:  2005-02       Impact factor: 9.031

9.  Dietary exposure to polychlorinated biphenyls and dioxins from infancy until adulthood: A comparison between breast-feeding, toddler, and long-term exposure.

Authors:  S Patandin; P C Dagnelie; P G Mulder; E Op de Coul; J E van der Veen; N Weisglas-Kuperus; P J Sauer
Journal:  Environ Health Perspect       Date:  1999-01       Impact factor: 9.031

10.  Prenatal PCB exposure and thymus size at birth in neonates in Eastern Slovakia.

Authors:  Hye-Youn Park; Irva Hertz-Picciotto; Jan Petrik; Lubica Palkovicova; Anton Kocan; Tomas Trnovec
Journal:  Environ Health Perspect       Date:  2008-01       Impact factor: 9.031

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  13 in total

1.  Transcriptional profiling and biological pathway analysis of human equivalence PCB exposure in vitro: indicator of disease and disorder development in humans.

Authors:  Somiranjan Ghosh; Partha S Mitra; Christopher A Loffredo; Tomas Trnovec; Lubica Murinova; Eva Sovcikova; Svetlana Ghimbovschi; Shizhu Zang; Eric P Hoffman; Sisir K Dutta
Journal:  Environ Res       Date:  2015-02-27       Impact factor: 6.498

Review 2.  Biomarkers linking PCB exposure and obesity.

Authors:  Somiranjan Ghosh; Lubica Murinova; Tomas Trnovec; Christopher A Loffredo; Kareem Washington; Partha S Mitra; Sisir K Dutta
Journal:  Curr Pharm Biotechnol       Date:  2014       Impact factor: 2.837

3.  PCB exposure and potential future cancer incidence in Slovak children: an assessment from molecular finger printing by Ingenuity Pathway Analysis (IPA®) derived from experimental and epidemiological investigations.

Authors:  Somiranjan Ghosh; Christopher A Loffredo; Partha S Mitra; Tomas Trnovec; Lubica Palkovicova Murinova; Eva Sovcikova; Eric P Hoffman; Kepher H Makambi; Sisir K Dutta
Journal:  Environ Sci Pollut Res Int       Date:  2017-11-15       Impact factor: 4.223

4.  Evaluating genotoxic risks in Brazilian public health agents occupationally exposed to pesticides: a multi-biomarker approach.

Authors:  Fernanda Craveiro Franco; Alessandro Arruda Alves; Fernanda Ribeiro Godoy; Juliana Boaventura Avelar; Douglas Dantas Rodrigues; Thays Millena Alves Pedroso; Aparecido Divino da Cruz; Fausto Nomura; Daniela de Melo E Silva
Journal:  Environ Sci Pollut Res Int       Date:  2016-07-13       Impact factor: 4.223

5.  Analysis of the toxicogenomic effects of exposure to persistent organic pollutants (POPs) in Slovakian girls: correlations between gene expression and disease risk.

Authors:  Partha Sarathi Mitra; Somiranjan Ghosh; Shizhu Zang; Dean Sonneborn; Irva Hertz-Picciotto; Tomas Trnovec; Lubica Palkovicova; Eva Sovcikova; Svetlana Ghimbovschi; Eric P Hoffman; Sisir K Dutta
Journal:  Environ Int       Date:  2011-12-08       Impact factor: 9.621

6.  Differential gene expression and a functional analysis of PCB-exposed children: understanding disease and disorder development.

Authors:  Sisir K Dutta; Partha S Mitra; Somiranjan Ghosh; Shizhu Zang; Dean Sonneborn; Irva Hertz-Picciotto; Tomas Trnovec; Lubica Palkovicova; Eva Sovcikova; Svetlana Ghimbovschi; Eric P Hoffman
Journal:  Environ Int       Date:  2011-09-08       Impact factor: 9.621

7.  Status of LEPR Gene in PCB-exposed Population: A Quick Look.

Authors:  Somiranjan Ghosh; Tomas Trnovec; Lubica Palkovicova; Eric P Hoffman; Kareem Washington; Sisir K Dutta
Journal:  Int J Hum Genet       Date:  2013-03       Impact factor: 0.226

Review 8.  Biomarkers of metabolic disorders and neurobehavioral diseases in a PCB- exposed population: What we learned and the implications for future research.

Authors:  Jyothirmai J Simhadri; Christopher A Loffredo; Tomas Trnovec; Lubica Palkovicova Murinova; Gail Nunlee-Bland; Janna G Koppe; Greet Schoeters; Siddhartha Sankar Jana; Somiranjan Ghosh
Journal:  Environ Res       Date:  2020-09-13       Impact factor: 6.498

9.  The influence of sex, genotype, and dose on serum and hippocampal cytokine levels in juvenile mice developmentally exposed to a human-relevant mixture of polychlorinated biphenyls.

Authors:  Lauren Matelski; Kimberly P Keil Stietz; Sunjay Sethi; Sandra L Taylor; Judy Van de Water; Pamela J Lein
Journal:  Curr Res Toxicol       Date:  2020-09-10

10.  Gene expression profiling and pathway analysis data in MCF-7 and MDA-MB-231 human breast cancer cell lines treated with dioscin.

Authors:  Pranapda Aumsuwan; Shabana I Khan; Ikhlas A Khan; Larry A Walker; Asok K Dasmahapatra
Journal:  Data Brief       Date:  2016-05-25
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