| Literature DB >> 21470460 |
Alessandra Scagliarini1, Francesca Vaccari, Filippo Turrini, Alessandro Bianchi, Paolo Cordioli, Antonio Lavazza.
Abstract
To characterize parapoxviruses causing severe disease in wild ruminants in Stelvio Park, Italy, we sequenced and compared the DNA of several isolates. Results demonstrated that the red deer isolates are closely related to the parapox of red deer in New Zealand virus.Entities:
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Year: 2011 PMID: 21470460 PMCID: PMC3377414 DOI: 10.3201/eid1704.101454
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Papular stomatitis in a red deer. A) Proliferative lesions on the lips; B) erosions, vesicles, and ulcers in the mouth.
Chordopoxviruses used for the phylogenetic analyses of the major envelope protein sequences*
| Chordopoxvirus species | Original host | GenBank accession no. |
|---|---|---|
| PVNZ 168/09 | Red deer | HQ239068 |
| PVNZ 348/08 | Red deer | HQ239070 |
| PVNZ 256/08 | Red deer | HQ239069 |
| OV 257/09 | Chamois | HQ239071 |
| OV 373/08 | Ibex | HQ239072 |
| OV 485/09 | Chamois | HQ239073 |
| PCPV BO35 | Bovine | AY453653 |
| PCPV F00.128R | Reindeer | AY453657 |
| PCPV F00120.R | Reindeer | GQ329669 |
| PCPV F00.91.R | Reindeer | AY453658 |
| PCPV VR634 | Human | GQ329670 |
| PCPV F99.177C | Bovine | AY453663 |
| OV NZ-2 | Sheep | U06671 |
| OV IA82 | Sheep | AY386263 |
| OV F92.849 | Reindeer | AY453659 |
| OV Orf11 | Sheep | AY453666 |
| OV AICHI | Japanese serow | AB521165 |
| OV SA00 | Goat | AY386264 |
| OV D1701 | Sheep | AY453654 |
| PVNZ RD86 | Red deer | AY453655 |
| BPSV Aomori | Bovine | AB044797 |
| BPSV Chiba | Bovine | AB044798 |
| BPSV V660 | Bovine | AY453664 |
| SPV | Seal | AF414182 |
| CPXV ref strain BR | ATCC VR302 | AF482758 |
| MPXV | Human | AF380138 |
| HPXV | Horse | DQ792504 |
| VACV ref strain WR | ATCC VR1354 | NC 006998 |
| CMLV | Camel | AF438165 |
| VARV | Human | L22579 |
| SPPV | Sheeppox virus | AF199594 |
| LSDV | Bovine | NC_003027 |
| DPV | Mule deer | NC_006967 |
| YLDV | Monkey | NC_002642 |
| MOCV | Human | U60315 |
| FWPV | Bird | AF198100 |
*PVNZ, parapox of red deer in New Zealand virus; OV, orf virus; PCPV, pseudocowpox virus; BPSV, bovine papular stomatitis virus; SPV, seal poxvirus; CPXV, cowpox virus; ATCC, American Type Culture Collection; MPXV, monkey poxvirus; HPXV, horsepox virus; VACV, vaccinia virus; CMLV, camelpox virus; VARV, variola virus; SPPV, sheeppox virus; LSDV, lumpy skin disease virus; DPV, deerpox virus; YLDV, Yaba like disease virus; MOCV, molluscum contagiosum virus; FWPV, fowlpox virus.
Figure 2A) Phylogenetic tree of chordopox virus (Table) calculated from the deduced amino acid sequences of the major envelop protein gene. Chordopox virus sequences were edited to correspond to the amino acid sequences of parapoxviruses and aligned by using ClustalW (www.ebi.ac.uk/clustalw). Analyses were performed by using PHYLIP version 3.69 (distributed by J. Felsenstein, University of Washington, Seattle, WA, USA) and the maximum-likelihood method. Numbers on the nodes show the percentage of bootstrap calculated for 1,000 replicates. B) Phylogenetic tree based on the amino acid sequences of the parapoxviral vascular endothelial growth factor (VEGF) gene sequences. The genetic distance was estimated by using the Jones-Taylor-Thornton model of the program PRODIST and the phylogenies by using the Fitch-Margoliash method of FITCH (www.phylip.com). Tree was constructed by using PHYLIP version 3.69. Strain 348/08 is not shown because it shares 100% identity with RD-86. Scale bars indicate amino acid substitutions per site.