Literature DB >> 21468211

Metabolic engineering for improved microbial pentose fermentation.

Sara Fernandes1, Patrick Murray.   

Abstract

Global concern over the depletion of fossil fuel reserves, and the detrimental impact that combustion of these materials has on the environment, is focusing attention on initiatives to create sustainable approaches for the production and use of biofuels from various biomass substrates. The development of a low-cost, safe and eco-friendly process for the utilization of renewable resources to generate value-added products with biotechnological potential as well as robust microorganisms capable of efficient fermentation of all types of sugars are essential to underpin the economic production of biofuels from biomass feedstocks. Saccharomyces cerevisiae, the most established fermentation yeast used in large scale bioconversion strategies, does not however metabolise the pentose sugars, xylose and arabinose and bioengineering is required for introduction of efficient pentose metabolic pathways and pentose sugar transport proteins for bioconversion of these substrates. Our approach provided a basis for future experiments that may ultimately lead to the development of industrial S. cerevisiae strains engineered to express pentose metabolising proteins from thermophilic fungi living on decaying plant material and here we expand our original article and discuss the strategies implemented to improve pentose fermentation.
© 2010 Landes Bioscience

Entities:  

Keywords:  cofactor imbalance; metabolic engineering; pentose fermentation

Mesh:

Substances:

Year:  2010        PMID: 21468211      PMCID: PMC3056094          DOI: 10.4161/bbug.1.6.12724

Source DB:  PubMed          Journal:  Bioeng Bugs        ISSN: 1949-1018


  19 in total

1.  Genetically engineered Saccharomyces yeast capable of effective cofermentation of glucose and xylose.

Authors:  N W Ho; Z Chen; A P Brainard
Journal:  Appl Environ Microbiol       Date:  1998-05       Impact factor: 4.792

2.  Isolation and characterization of the 1,4-beta-D-glucan glucanohydrolases of Talaromyces emersonii.

Authors:  A P Moloney; S I McCrae; T M Wood; M P Coughlan
Journal:  Biochem J       Date:  1985-01-15       Impact factor: 3.857

3.  Deletion of the GRE3 aldose reductase gene and its influence on xylose metabolism in recombinant strains of Saccharomyces cerevisiae expressing the xylA and XKS1 genes.

Authors:  K L Träff; R R Otero Cordero; W H van Zyl; B Hahn-Hägerdal
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

Review 4.  Towards industrial pentose-fermenting yeast strains.

Authors:  Bärbel Hahn-Hägerdal; Kaisa Karhumaa; César Fonseca; Isabel Spencer-Martins; Marie F Gorwa-Grauslund
Journal:  Appl Microbiol Biotechnol       Date:  2007-02-09       Impact factor: 4.813

5.  The coenzyme specificity of Candida tenuis xylose reductase (AKR2B5) explored by site-directed mutagenesis and X-ray crystallography.

Authors:  Barbara Petschacher; Stefan Leitgeb; Kathryn L Kavanagh; David K Wilson; Bernd Nidetzky
Journal:  Biochem J       Date:  2005-01-01       Impact factor: 3.857

6.  High-level functional expression of a fungal xylose isomerase: the key to efficient ethanolic fermentation of xylose by Saccharomyces cerevisiae?

Authors:  Marko Kuyper; Harry R Harhangi; Ann Kristin Stave; Aaron A Winkler; Mike S M Jetten; Wim T A M de Laat; Jan J J den Ridder; Huub J M Op den Camp; Johannes P van Dijken; Jack T Pronk
Journal:  FEMS Yeast Res       Date:  2003-10       Impact factor: 2.796

7.  Xylose reductase from the thermophilic fungus Talaromyces emersonii: cloning and heterologous expression of the native gene (Texr) and a double mutant (TexrK271R + N273D) with altered coenzyme specificity.

Authors:  Sara Fernandes; Maria G Tuohy; Patrick G Murray
Journal:  J Biosci       Date:  2009-12       Impact factor: 1.826

8.  The xylan-degrading enzyme system of Talaromyces emersonii: novel enzymes with activity against aryl beta-D-xylosides and unsubstituted xylans.

Authors:  M G Tuohy; J Puls; M Claeyssens; M Vrsanská; M P Coughlan
Journal:  Biochem J       Date:  1993-03-01       Impact factor: 3.857

9.  Engineering redox cofactor regeneration for improved pentose fermentation in Saccharomyces cerevisiae.

Authors:  Ritva Verho; John Londesborough; Merja Penttilä; Peter Richard
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

10.  Altering the coenzyme preference of xylose reductase to favor utilization of NADH enhances ethanol yield from xylose in a metabolically engineered strain of Saccharomyces cerevisiae.

Authors:  Barbara Petschacher; Bernd Nidetzky
Journal:  Microb Cell Fact       Date:  2008-03-17       Impact factor: 5.328

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  10 in total

1.  Organic acids from lignocellulose: Candida lignohabitans as a new microbial cell factory.

Authors:  Martina Bellasio; Diethard Mattanovich; Michael Sauer; Hans Marx
Journal:  J Ind Microbiol Biotechnol       Date:  2015-02-05       Impact factor: 3.346

Review 2.  Metabolic engineering of yeasts by heterologous enzyme production for degradation of cellulose and hemicellulose from biomass: a perspective.

Authors:  William Kricka; James Fitzpatrick; Ursula Bond
Journal:  Front Microbiol       Date:  2014-04-22       Impact factor: 5.640

3.  Notable mixed substrate fermentation by native Kodamaea ohmeri strains isolated from Lagenaria siceraria flowers and ethanol production on paddy straw hydrolysates.

Authors:  Shalley Sharma; Anju Arora; Pankhuri Sharma; Surender Singh; Lata Nain; Debarati Paul
Journal:  Chem Cent J       Date:  2018-02-05       Impact factor: 4.215

4.  Characterization of highly active 2-keto-3-deoxy-L-arabinonate and 2-keto-3-deoxy-D-xylonate dehydratases in terms of the biotransformation of hemicellulose sugars to chemicals.

Authors:  Samuel Sutiono; Bettina Siebers; Volker Sieber
Journal:  Appl Microbiol Biotechnol       Date:  2020-06-21       Impact factor: 4.813

5.  l-Arabinose triggers its own uptake via induction of the arabinose-specific Gal2p transporter in an industrial Saccharomyces cerevisiae strain.

Authors:  Verena Oehling; Paul Klaassen; Oliver Frick; Christian Dusny; Andreas Schmid
Journal:  Biotechnol Biofuels       Date:  2018-08-23       Impact factor: 6.040

6.  Generating phenotypic diversity in a fungal biocatalyst to investigate alcohol stress tolerance encountered during microbial cellulosic biofuel production.

Authors:  Rosanna C Hennessy; Fiona Doohan; Ewen Mullins
Journal:  PLoS One       Date:  2013-10-16       Impact factor: 3.240

7.  Engineering xylose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production.

Authors:  Kazuhiko Kurosawa; Sandra J Wewetzer; Anthony J Sinskey
Journal:  Biotechnol Biofuels       Date:  2013-09-16       Impact factor: 6.040

8.  Bypassing the Pentose Phosphate Pathway: Towards Modular Utilization of Xylose.

Authors:  Kulika Chomvong; Stefan Bauer; Daniel I Benjamin; Xin Li; Daniel K Nomura; Jamie H D Cate
Journal:  PLoS One       Date:  2016-06-23       Impact factor: 3.240

9.  Expression, Docking, and Molecular Dynamics of Endo-β-1,4-xylanase I Gene of Trichoderma virens in Pichia stipitis.

Authors:  Gammadde Hewa Ishan Maduka Wickramasinghe; Pilimathalawe Panditharathna Attanayake Mudiyanselage Samith Indika Rathnayake; Naduviladath Vishvanath Chandrasekharan; Mahindagoda Siril Samantha Weerasinghe; Ravindra Lakshman Chundananda Wijesundera; Wijepurage Sandhya Sulochana Wijesundera
Journal:  Biomed Res Int       Date:  2017-08-10       Impact factor: 3.411

10.  Metabolomic Profiles of Aspergillus oryzae and Bacillus amyloliquefaciens During Rice Koji Fermentation.

Authors:  Da Eun Lee; Sunmin Lee; Eun Seok Jang; Hye Won Shin; Byoung Seok Moon; Choong Hwan Lee
Journal:  Molecules       Date:  2016-06-14       Impact factor: 4.411

  10 in total

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