Literature DB >> 21466234

Autodeimination of protein arginine deiminase 4 alters protein-protein interactions but not activity.

Jessica L Slack1, Larry E Jones, Monica M Bhatia, Paul R Thompson.   

Abstract

The protein arginine deiminases (PAD), which catalyze the hydrolysis of peptidyl-arginine to form peptidyl-citrulline, play important roles in a variety of cell signaling pathways, including apoptosis, differentiation, and transcriptional regulation. In addition to these important cellular roles, PAD activity is dysregulated in multiple human diseases [e.g., rheumatoid arthritis (RA), cancer, and colitis], and significantly, PAD inhibition with Cl-amidine has been shown to reduce disease severity in the collagen-induced arthritis model of RA. Although these enzymes play important roles in human cell signaling and disease, the mechanisms that regulate PAD activity under both physiological and pathological conditions are poorly understood. One possible mechanism for regulating PAD activity is autodeimination, to which PAD4 has been shown by us and others to be subjected in vitro and in vivo. Herein, we demonstrate that PAD4 autodeimination does not alter the activity, substrate specificity, or calcium dependence of this isozyme. However, the results of these studies indicate a novel role for autodeimination in modulating the ability of PAD4 to interact with histone deacetylase 1 (HDAC1), citrullinated histone H3 (Cit H3), and protein arginine methyltransferase 1 (PRMT1).

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Year:  2011        PMID: 21466234      PMCID: PMC3091952          DOI: 10.1021/bi200309e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  35 in total

1.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  Overexpression of peptidylarginine deiminase IV features in apoptosis of haematopoietic cells.

Authors:  G-Y Liu; Y-F Liao; W-H Chang; C-C Liu; M-C Hsieh; P-C Hsu; G J Tsay; H-C Hung
Journal:  Apoptosis       Date:  2006-02       Impact factor: 4.677

3.  A fluoroacetamidine-based inactivator of protein arginine deiminase 4: design, synthesis, and in vitro and in vivo evaluation.

Authors:  Yuan Luo; Bryan Knuckley; Young-Ho Lee; Michael R Stallcup; Paul R Thompson
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

4.  Development and use of clickable activity based protein profiling agents for protein arginine deiminase 4.

Authors:  Jessica L Slack; Corey P Causey; Yuan Luo; Paul R Thompson
Journal:  ACS Chem Biol       Date:  2011-02-07       Impact factor: 5.100

5.  A colorimetric 96-well microtiter plate assay for the determination of enzymatically formed citrulline.

Authors:  M Knipp; M Vasák
Journal:  Anal Biochem       Date:  2000-11-15       Impact factor: 3.365

6.  A functional haplotype of the PADI4 gene associated with increased rheumatoid arthritis susceptibility in Koreans.

Authors:  Changsoo Paul Kang; Hye-Soon Lee; Hyoungseok Ju; Hyunmi Cho; Changwon Kang; Sang-Cheol Bae
Journal:  Arthritis Rheum       Date:  2006-01

7.  Functional haplotypes of PADI4, encoding citrullinating enzyme peptidylarginine deiminase 4, are associated with rheumatoid arthritis.

Authors:  Akari Suzuki; Ryo Yamada; Xiaotian Chang; Shinya Tokuhiro; Tetsuji Sawada; Masakatsu Suzuki; Miyuki Nagasaki; Makiko Nakayama-Hamada; Reimi Kawaida; Mitsuru Ono; Masahiko Ohtsuki; Hidehiko Furukawa; Shinichi Yoshino; Masao Yukioka; Shigeto Tohma; Tsukasa Matsubara; Shigeyuki Wakitani; Ryota Teshima; Yuichi Nishioka; Akihiro Sekine; Aritoshi Iida; Atsushi Takahashi; Tatsuhiko Tsunoda; Yusuke Nakamura; Kazuhiko Yamamoto
Journal:  Nat Genet       Date:  2003-08       Impact factor: 38.330

8.  Kinetic characterization of protein arginine deiminase 4: a transcriptional corepressor implicated in the onset and progression of rheumatoid arthritis.

Authors:  Patricia L Kearney; Monica Bhatia; Nelroy G Jones; Luo Yuan; Mary C Glascock; Kristen L Catchings; Michiyuki Yamada; Paul R Thompson
Journal:  Biochemistry       Date:  2005-08-09       Impact factor: 3.162

9.  Histone deimination antagonizes arginine methylation.

Authors:  Graeme L Cuthbert; Sylvain Daujat; Andrew W Snowden; Hediye Erdjument-Bromage; Teruki Hagiwara; Michiyuki Yamada; Robert Schneider; Philip D Gregory; Paul Tempst; Andrew J Bannister; Tony Kouzarides
Journal:  Cell       Date:  2004-09-03       Impact factor: 41.582

10.  Human PAD4 regulates histone arginine methylation levels via demethylimination.

Authors:  Yanming Wang; Joanna Wysocka; Joyce Sayegh; Young-Ho Lee; Julie R Perlin; Lauriebeth Leonelli; Lakshmi S Sonbuchner; Charles H McDonald; Richard G Cook; Yali Dou; Robert G Roeder; Steven Clarke; Michael R Stallcup; C David Allis; Scott A Coonrod
Journal:  Science       Date:  2004-09-02       Impact factor: 47.728

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  25 in total

Review 1.  Protein Arginine Deiminases and Associated Citrullination: Physiological Functions and Diseases Associated with Dysregulation.

Authors:  Erin E Witalison; Paul R Thompson; Lorne J Hofseth
Journal:  Curr Drug Targets       Date:  2015       Impact factor: 3.465

Review 2.  Chemical biology of protein arginine modifications in epigenetic regulation.

Authors:  Jakob Fuhrmann; Kathleen W Clancy; Paul R Thompson
Journal:  Chem Rev       Date:  2015-05-13       Impact factor: 60.622

3.  Citrullination of NF-κB p65 promotes its nuclear localization and TLR-induced expression of IL-1β and TNFα.

Authors:  Bo Sun; Nishant Dwivedi; Tyler J Bechtel; Janet L Paulsen; Aaron Muth; Mandar Bawadekar; Gang Li; Paul R Thompson; Miriam A Shelef; Celia A Schiffer; Eranthie Weerapana; I-Cheng Ho
Journal:  Sci Immunol       Date:  2017-06-09

4.  Comparative analysis of autoantibodies targeting peptidylarginine deiminase type 4, mutated citrullinated vimentin and cyclic citrullinated peptides in rheumatoid arthritis: associations with cytokine profiles, clinical and genetic features.

Authors:  Z Reyes-Castillo; C A Palafox-Sánchez; I Parra-Rojas; G E Martínez-Bonilla; S del Toro-Arreola; M G Ramírez-Dueñas; G Ocampo-Bermudes; José F Muñoz-Valle
Journal:  Clin Exp Immunol       Date:  2015-09-16       Impact factor: 4.330

5.  Citrulline Not a Major Determinant in the Recognition of Peptidylarginine Deiminase 2 and 4 by Autoantibodies in Rheumatoid Arthritis.

Authors:  Erika Darrah; Ryan L Davis; Ashley M Curran; Pooja Naik; Ruiqiang Chen; Chan Hyun Na; Jon T Giles; Felipe Andrade
Journal:  Arthritis Rheumatol       Date:  2020-07-14       Impact factor: 10.995

6.  Seeing citrulline: development of a phenylglyoxal-based probe to visualize protein citrullination.

Authors:  Kevin L Bicker; Venkataraman Subramanian; Alexander A Chumanevich; Lorne J Hofseth; Paul R Thompson
Journal:  J Am Chem Soc       Date:  2012-10-03       Impact factor: 15.419

7.  Evolution of a mass spectrometry-grade protease with PTM-directed specificity.

Authors:  Duc T Tran; Valerie J Cavett; Vuong Q Dang; Héctor L Torres; Brian M Paegel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-08       Impact factor: 11.205

Review 8.  The protein arginine deiminases: Structure, function, inhibition, and disease.

Authors:  Kevin L Bicker; Paul R Thompson
Journal:  Biopolymers       Date:  2013-02       Impact factor: 2.505

9.  A novel role for protein arginine deiminase 4 in pluripotency: the emerging role of citrullinated histone H1 in cellular programming.

Authors:  Daniel J Slade; Sachi Horibata; Scott A Coonrod; Paul R Thompson
Journal:  Bioessays       Date:  2014-05-30       Impact factor: 4.345

Review 10.  Chemical and biological methods to detect post-translational modifications of arginine.

Authors:  Daniel J Slade; Venkataraman Subramanian; Jakob Fuhrmann; Paul R Thompson
Journal:  Biopolymers       Date:  2014-02       Impact factor: 2.505

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