Literature DB >> 21464504

Causal Inference on Discrete Data Using Additive Noise Models.

Jonas Peters, Dominik Janzing, Bernhard Schölkopf.   

Abstract

Inferring the causal structure of a set of random variables from a finite sample of the joint distribution is an important problem in science. The case of two random variables is particularly challenging since no (conditional) independences can be exploited. Recent methods that are based on additive noise models suggest the following principle: Whenever the joint distribution P((X,Y)) admits such a model in one direction, e.g., Y = f(X)+N, N ⊥ X, but does not admit the reversed model X=g(Y)+Ñ, Ñ ⊥ Y, one infers the former direction to be causal (i.e., X → Y). Up to now, these approaches only dealt with continuous variables. In many situations, however, the variables of interest are discrete or even have only finitely many states. In this work, we extend the notion of additive noise models to these cases. We prove that it almost never occurs that additive noise models can be fit in both directions. We further propose an efficient algorithm that is able to perform this way of causal inference on finite samples of discrete variables. We show that the algorithm works on both synthetic and real data sets.

Year:  2011        PMID: 21464504     DOI: 10.1109/TPAMI.2011.71

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  9 in total

1.  Bayesian Estimation of Causal Direction in Acyclic Structural Equation Models with Individual-specific Confounder Variables and Non-Gaussian Distributions.

Authors:  Shohei Shimizu; Kenneth Bollen
Journal:  J Mach Learn Res       Date:  2014-08       Impact factor: 3.654

2.  Bayesian Causality.

Authors:  Pierre Baldi; Babak Shahbaba
Journal:  Am Stat       Date:  2019-08-26       Impact factor: 8.710

3.  MRPC: An R Package for Inference of Causal Graphs.

Authors:  Md Bahadur Badsha; Evan A Martin; Audrey Qiuyan Fu
Journal:  Front Genet       Date:  2021-04-30       Impact factor: 4.599

4.  Shared Causal Paths underlying Alzheimer's dementia and Type 2 Diabetes.

Authors:  Zixin Hu; Rong Jiao; Panpan Wang; Yun Zhu; Jinying Zhao; Phil De Jager; David A Bennett; Li Jin; Momiao Xiong
Journal:  Sci Rep       Date:  2020-03-05       Impact factor: 4.379

5.  Analysis of cause-effect inference by comparing regression errors.

Authors:  Patrick Blöbaum; Dominik Janzing; Takashi Washio; Shohei Shimizu; Bernhard Schölkopf
Journal:  PeerJ Comput Sci       Date:  2019-01-21

6.  Causal risk factor discovery for severe acute kidney injury using electronic health records.

Authors:  Weiqi Chen; Yong Hu; Xiangzhou Zhang; Lijuan Wu; Kang Liu; Jianqin He; Zilin Tang; Xing Song; Lemuel R Waitman; Mei Liu
Journal:  BMC Med Inform Decis Mak       Date:  2018-03-22       Impact factor: 2.796

7.  Causal Discovery Combining K2 with Brain Storm Optimization Algorithm.

Authors:  Yinghan Hong; Zhifeng Hao; Guizhen Mai; Han Huang; Arun Kumar Sangaiah
Journal:  Molecules       Date:  2018-07-16       Impact factor: 4.411

8.  Inferring causal pathways among three or more variables from steady-state correlations in a homeostatic system.

Authors:  Suraj Chawla; Anagha Pund; Vibishan B; Shubhankar Kulkarni; Manawa Diwekar-Joshi; Milind Watve
Journal:  PLoS One       Date:  2018-10-11       Impact factor: 3.240

Review 9.  Application of Causal Inference to Genomic Analysis: Advances in Methodology.

Authors:  Pengfei Hu; Rong Jiao; Li Jin; Momiao Xiong
Journal:  Front Genet       Date:  2018-07-10       Impact factor: 4.599

  9 in total

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