Literature DB >> 21460112

Quantification of Propionibacterium acidipropionici P169 bacteria in environmental samples by use of strain-specific primers derived by suppressive subtractive hybridization.

Min Peng1, Alexandra H Smith, Thomas G Rehberger.   

Abstract

A quantitative PCR (qPCR) assay targeting a gene identified by suppressive subtractive hybridization (SSH) was developed to detect Propionibacterium acidipropionici P169, with a threshold of 10(4) CFU/U of dairy feed or rumen fluid. The report is the first using a molecular marker generated by SSH to quantify a bacterial strain in environmental samples.

Entities:  

Mesh：

Substances：

Year:  2011        PMID： 21460112      PMCID： PMC3127586          DOI： 10.1128/AEM.02586-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  27 in total

1.  Identification and characterization of nuclease activities in anaerobic environmental samples.

Authors:  T R Ruiz; S Andrews; G B Smith
Journal:  Can J Microbiol       Date:  2000-08       Impact factor: 2.419

2.  Characterization of the 16S-23S and 23S-5S rRNA intergenic spacer regions of dairy propionibacteria and their identification with species-specific primers by PCR.

Authors:  A Tilsala-Timisjärvi; T Alatossava
Journal:  Int J Food Microbiol       Date:  2001-08-15       Impact factor: 5.277

3.  Rapid quantitative detection of Lactobacillus sakei in meat and fermented sausages by real-time PCR.

Authors:  Belén Martín; Anna Jofré; Margarita Garriga; Maria Pla; Teresa Aymerich
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

4.  Propionibacteria fed to dairy cows: effects on energy balance, plasma metabolites and hormones, and reproduction.

Authors:  C C Francisco; C S Chamberlain; D N Waldner; R P Wettemann; L J Spicer
Journal:  J Dairy Sci       Date:  2002-07       Impact factor: 4.034

5.  Quantitative detection of probiotic Bifidobacterium strains in bacterial mixtures by using real-time PCR.

Authors:  Beatrice Vitali; Marco Candela; Diego Matteuzzi; Patrizia Brigidi
Journal:  Syst Appl Microbiol       Date:  2003-06       Impact factor: 4.022

6.  Suppressive subtractive hybridization detects extensive genomic diversity in Thermotoga maritima.

Authors:  Camilla L Nesbø; Karen E Nelson; W Ford Doolittle
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

7.  Specific identification of certain probiotic Lactobacillus rhamnosus strains with PCR primers based on phage-related sequences.

Authors:  Kirsi Brandt; Tapani Alatossava
Journal:  Int J Food Microbiol       Date:  2003-07-25       Impact factor: 5.277

8.  Splanchnic metabolism of dairy cows during the transition from late gestation through early lactation.

Authors:  C K Reynolds; P C Aikman; B Lupoli; D J Humphries; D E Beever
Journal:  J Dairy Sci       Date:  2003-04       Impact factor: 4.034

9.  Cell wall composition and deoxyribonucleic acid similarities among the anaerobic coryneforms, classical propionibacteria, and strains of Arachnia propionica.

Authors:  J L Johnson; C S Cummins
Journal:  J Bacteriol       Date:  1972-03       Impact factor: 3.490

10.  PCR detection and 16S rRNA sequence-based phylogeny of a novel Propionibacterium acidipropionici applicable for enhanced fermentation of high moisture corn.

Authors:  M N Romanov; R V Bato; M T Yokoyama; S R Rust
Journal:  J Appl Microbiol       Date:  2004       Impact factor: 3.772
View more
  2 in total

1.  Quantitative detection of viable Bifidobacterium bifidum BF-1 cells in human feces by using propidium monoazide and strain-specific primers.

Authors:  Junji Fujimoto; Koichi Watanabe
Journal:  Appl Environ Microbiol       Date:  2013-01-25       Impact factor: 4.792

2.  Development of a strain-specific real-time PCR assay for enumeration of a probiotic Lactobacillus reuteri in chicken feed and intestine.

Authors:  Verity Ann Sattler; Michaela Mohnl; Viviana Klose
Journal:  PLoS One       Date:  2014-02-27       Impact factor: 3.240
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.