Literature DB >> 21451511

Clonal interrogation of stem cells.

Kristin Hope1, Mickie Bhatia.   

Abstract

Individual stem cells are functionally defined by their self-renewal and differentiation potential. Methods for clonal analysis are essential for understanding stem cells, particularly given the increasing evidence for stem-cell heterogeneity. Stem cells reside within complex microenvironments, making single-cell analysis particularly challenging. Furthermore, simultaneous molecular and functional characterization of single stem cells is not trivial. Here we explore clonal assays applied to stem cell biology and their use in understanding the cellular and molecular basis of stem-cell identity.

Mesh:

Year:  2011        PMID: 21451511     DOI: 10.1038/nmeth.1590

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  54 in total

1.  Developmental biology. Microenvironment mimicry.

Authors:  Mickie Bhatia
Journal:  Science       Date:  2010-08-27       Impact factor: 47.728

2.  Introduction of a selectable gene into primitive stem cells capable of long-term reconstitution of the hemopoietic system of W/Wv mice.

Authors:  J E Dick; M C Magli; D Huszar; R A Phillips; A Bernstein
Journal:  Cell       Date:  1985-08       Impact factor: 41.582

3.  Non-muscle myosin II regulates survival threshold of pluripotent stem cells.

Authors:  Andrea Walker; Hua Su; Mary Anne Conti; Nicole Harb; Robert S Adelstein; Noboru Sato
Journal:  Nat Commun       Date:  2010-09-07       Impact factor: 14.919

4.  Clonal tracking of hESCs reveals differential contribution to functional assays.

Authors:  Morag H Stewart; Sean C Bendall; Marilyne Levadoux-Martin; Mickie Bhatia
Journal:  Nat Methods       Date:  2010-10-17       Impact factor: 28.547

5.  Initiating and cancer-propagating cells in TEL-AML1-associated childhood leukemia.

Authors:  Dengli Hong; Rajeev Gupta; Philip Ancliff; Ann Atzberger; John Brown; Shamit Soneji; Joanne Green; Sue Colman; Wanda Piacibello; Veronica Buckle; Shinobu Tsuzuki; Mel Greaves; Tariq Enver
Journal:  Science       Date:  2008-01-18       Impact factor: 47.728

6.  Differences in the frequency of normal and clonal precursors of colony-forming cells in chronic myelogenous leukemia and acute myelogenous leukemia.

Authors:  I D Bernstein; J W Singer; F O Smith; R G Andrews; D A Flowers; J Petersens; L Steinmann; V Najfeld; D Savage; S Fruchtman
Journal:  Blood       Date:  1992-04-01       Impact factor: 22.113

7.  Hematopoietic stem cells engraft in mice with absolute efficiency.

Authors:  Patricia Benveniste; Claude Cantin; Deborah Hyam; Norman N Iscove
Journal:  Nat Immunol       Date:  2003-05-25       Impact factor: 25.606

8.  Derivation of completely cell culture-derived mice from early-passage embryonic stem cells.

Authors:  A Nagy; J Rossant; R Nagy; W Abramow-Newerly; J C Roder
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

9.  Identification of stem cells in small intestine and colon by marker gene Lgr5.

Authors:  Nick Barker; Johan H van Es; Jeroen Kuipers; Pekka Kujala; Maaike van den Born; Miranda Cozijnsen; Andrea Haegebarth; Jeroen Korving; Harry Begthel; Peter J Peters; Hans Clevers
Journal:  Nature       Date:  2007-10-14       Impact factor: 49.962

Review 10.  Development and applications of single-cell transcriptome analysis.

Authors:  Fuchou Tang; Kaiqin Lao; M Azim Surani
Journal:  Nat Methods       Date:  2011-04       Impact factor: 28.547

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  17 in total

1.  Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns.

Authors:  Veronica Sanchez-Freire; Antje D Ebert; Tomer Kalisky; Stephen R Quake; Joseph C Wu
Journal:  Nat Protoc       Date:  2012-04-05       Impact factor: 13.491

2.  Simple approach to three-color two-photon microscopy by a fiber-optic wavelength convertor.

Authors:  Kuen-Che Li; Lynn L H Huang; Jhih-Hao Liang; Ming-Che Chan
Journal:  Biomed Opt Express       Date:  2016-10-31       Impact factor: 3.732

3.  Progress in myeloma stem cells.

Authors:  Richard Dela Cruz; Guido Tricot; Maurizio Zangari; Fenghuang Zhan
Journal:  Am J Blood Res       Date:  2011-09-08

4.  Challenges in Cell Fate Acquisition to Scid-Repopulating Activity from Hemogenic Endothelium of hiPSCs Derived from AML Patients Using Forced Transcription Factor Expression.

Authors:  Deanna P Porras; Jennifer C Reid; Borko Tanasijevic; Diana Golubeva; Allison L Boyd; Mickie Bhatia
Journal:  Cells       Date:  2022-06-13       Impact factor: 7.666

5.  NIR-activated content release from plasmon resonant liposomes for probing single-cell responses.

Authors:  Sarah J Leung; Marek Romanowski
Journal:  ACS Nano       Date:  2012-11-07       Impact factor: 15.881

6.  In vitro pancreas organogenesis from dispersed mouse embryonic progenitors.

Authors:  Chiara Greggio; Filippo De Franceschi; Manuel Figueiredo-Larsen; Anne Grapin-Botton
Journal:  J Vis Exp       Date:  2014-07-19       Impact factor: 1.355

7.  Artificial three-dimensional niches deconstruct pancreas development in vitro.

Authors:  Chiara Greggio; Filippo De Franceschi; Manuel Figueiredo-Larsen; Samy Gobaa; Adrian Ranga; Henrik Semb; Matthias Lutolf; Anne Grapin-Botton
Journal:  Development       Date:  2013-11       Impact factor: 6.868

8.  Three-color femtosecond source for simultaneous excitation of three fluorescent proteins in two-photon fluorescence microscopy.

Authors:  Ke Wang; Tzu-Ming Liu; Juwell Wu; Nicholas G Horton; Charles P Lin; Chris Xu
Journal:  Biomed Opt Express       Date:  2012-07-31       Impact factor: 3.732

9.  Heterogeneous structure of stem cells dynamics: statistical models and quantitative predictions.

Authors:  Paul Bogdan; Bridget M Deasy; Burhan Gharaibeh; Timo Roehrs; Radu Marculescu
Journal:  Sci Rep       Date:  2014-04-28       Impact factor: 4.379

10.  iTRAQ-based proteomic analysis of polyploid giant cancer cells and budding progeny cells reveals several distinct pathways for ovarian cancer development.

Authors:  Shiwu Zhang; Imelda Mercado-Uribe; Samir Hanash; Jinsong Liu
Journal:  PLoS One       Date:  2013-11-14       Impact factor: 3.240

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