Literature DB >> 21451437

Olfactory neuroepithelium-derived neural progenitor cells as a model system for investigating the molecular mechanisms of neuropsychiatric disorders.

Oleg V Evgrafov1, Bozena B Wrobel, Xin Kang, George Simpson, Dolores Malaspina, James A Knowles.   

Abstract

OBJECTIVE: Most expression profiling studies of neuropsychiatric disorders have used RNA from postmortem brain tissue. Such studies are confounded by terminal events, environmental variables, such as drug use or abuse, postmortem interval, and tissue pH. To address these limitations, we have explored the use of cultured neuronal cells derived from olfactory neuroepithelium (CNON) from nasal biopsies as an alternate source of RNA. CNON cells are primarily composed of neural progenitor cells and are less influenced by environmental variables as compared with adult postmortem brain tissue.
METHODS: We collected biopsy samples and established CNON cultures from eight schizophrenia cases and eight healthy comparison individuals. RNA from the cells was profiled using Affymetrix Human Exon 1.0 ST arrays and the results were validated by immunostaining and real-time quantitative PCR.
RESULTS: The expression data show that CNON are primarily composed of neural progenitor cells. Furthermore, we observed a substantially higher correlation of global expression between control samples of CNON (0.98), as compared with postmortem tissue (GDS1917) (0.88). Finally, using the genome-wide expression data, we were able to differentiate CNON samples derived from individuals with and without schizophrenia in a principal component analysis and to identify candidate schizophrenia genes.
CONCLUSION: CNON is a novel model system for the study of neuropsychiatric disorders that drastically reduces both technical and biological noise as compared with postmortem tissue and is therefore well suited for the identification of genes that are differentially expressed between cases and controls.

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Mesh:

Year:  2011        PMID: 21451437     DOI: 10.1097/YPG.0b013e328341a2f0

Source DB:  PubMed          Journal:  Psychiatr Genet        ISSN: 0955-8829            Impact factor:   2.458


  10 in total

1.  Olfactory neurons obtained through nasal biopsy combined with laser-capture microdissection: a potential approach to study treatment response in mental disorders.

Authors:  Soumya Narayan; Charlee McLean; Akira Sawa; Sandra Y Lin; Narayan Rai; MariaMananita S Hipolito; Nicola Cascella; John J I Nurnberger; Koko Ishizuka; Evaristus A Nwulia
Journal:  J Vis Exp       Date:  2014-12-04       Impact factor: 1.355

2.  Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq).

Authors:  Suhn Kyong Rhie; Shannon Schreiner; Peggy J Farnham
Journal:  Methods Mol Biol       Date:  2018

Review 3.  The PsychENCODE project.

Authors:  Schahram Akbarian; Chunyu Liu; James A Knowles; Flora M Vaccarino; Peggy J Farnham; Gregory E Crawford; Andrew E Jaffe; Dalila Pinto; Stella Dracheva; Daniel H Geschwind; Jonathan Mill; Angus C Nairn; Alexej Abyzov; Sirisha Pochareddy; Shyam Prabhakar; Sherman Weissman; Patrick F Sullivan; Matthew W State; Zhiping Weng; Mette A Peters; Kevin P White; Mark B Gerstein; Anahita Amiri; Chris Armoskus; Allison E Ashley-Koch; Taejeong Bae; Andrea Beckel-Mitchener; Benjamin P Berman; Gerhard A Coetzee; Gianfilippo Coppola; Nancy Francoeur; Menachem Fromer; Robert Gao; Kay Grennan; Jennifer Herstein; David H Kavanagh; Nikolay A Ivanov; Yan Jiang; Robert R Kitchen; Alexey Kozlenkov; Marija Kundakovic; Mingfeng Li; Zhen Li; Shuang Liu; Lara M Mangravite; Eugenio Mattei; Eirene Markenscoff-Papadimitriou; Fábio C P Navarro; Nicole North; Larsson Omberg; David Panchision; Neelroop Parikshak; Jeremie Poschmann; Amanda J Price; Michael Purcaro; Timothy E Reddy; Panos Roussos; Shannon Schreiner; Soraya Scuderi; Robert Sebra; Mikihito Shibata; Annie W Shieh; Mario Skarica; Wenjie Sun; Vivek Swarup; Amber Thomas; Junko Tsuji; Harm van Bakel; Daifeng Wang; Yongjun Wang; Kai Wang; Donna M Werling; A Jeremy Willsey; Heather Witt; Hyejung Won; Chloe C Y Wong; Gregory A Wray; Emily Y Wu; Xuming Xu; Lijing Yao; Geetha Senthil; Thomas Lehner; Pamela Sklar; Nenad Sestan
Journal:  Nat Neurosci       Date:  2015-12       Impact factor: 24.884

4.  Assessing the efficacy of endoscopic office olfactory biopsy sites to produce neural progenitor cell cultures for the study of neuropsychiatric disorders.

Authors:  Bozena B Wrobel; Jill M Mazza; Oleg V Evgrafov; James A Knowles
Journal:  Int Forum Allergy Rhinol       Date:  2012-11-28       Impact factor: 3.858

5.  Transcriptional regulation of the MET receptor tyrosine kinase gene by MeCP2 and sex-specific expression in autism and Rett syndrome.

Authors:  J T Plummer; O V Evgrafov; M Y Bergman; M Friez; C A Haiman; P Levitt; K A Aldinger
Journal:  Transl Psychiatry       Date:  2013-10-22       Impact factor: 6.222

6.  Effect of RNA integrity on uniquely mapped reads in RNA-Seq.

Authors:  Emily A Chen; Tade Souaiaia; Jennifer S Herstein; Oleg V Evgrafov; Valeria N Spitsyna; Danea F Rebolini; James A Knowles
Journal:  BMC Res Notes       Date:  2014-10-23

7.  Lithium-associated transcriptional regulation of CRMP1 in patient-derived olfactory neurons and symptom changes in bipolar disorder.

Authors:  Charlee K McLean; Soumya Narayan; Sandra Y Lin; Narayan Rai; Youjin Chung; MariaMananita S Hipolito; Nicola G Cascella; John I Nurnberger; Koko Ishizuka; Akira S Sawa; Evaristus A Nwulia
Journal:  Transl Psychiatry       Date:  2018-04-18       Impact factor: 6.222

8.  Analysis of Gene Expression Variance in Schizophrenia Using Structural Equation Modeling.

Authors:  Anna A Igolkina; Chris Armoskus; Jeremy R B Newman; Oleg V Evgrafov; Lauren M McIntyre; Sergey V Nuzhdin; Maria G Samsonova
Journal:  Front Mol Neurosci       Date:  2018-06-11       Impact factor: 5.639

9.  Using 3D epigenomic maps of primary olfactory neuronal cells from living individuals to understand gene regulation.

Authors:  Suhn K Rhie; Shannon Schreiner; Heather Witt; Chris Armoskus; Fides D Lay; Adrian Camarena; Valeria N Spitsyna; Yu Guo; Benjamin P Berman; Oleg V Evgrafov; James A Knowles; Peggy J Farnham
Journal:  Sci Adv       Date:  2018-12-13       Impact factor: 14.136

10.  Antidepressant Low Doses of Ketamine and Melatonin in Combination Produce Additive Neurogenesis in Human Olfactory Neuronal Precursors.

Authors:  Rosa Estrada-Reyes; Daniel B Quero-Chávez; Salvador Alarcón-Elizalde; Montserrat G Cercós; Citlali Trueta; Luis A Constantino-Jonapa; Julián Oikawa-Sala; Jesús Argueta; Ricardo Cruz-Garduño; Margarita L Dubocovich; Gloria A Benítez-King
Journal:  Molecules       Date:  2022-09-01       Impact factor: 4.927

  10 in total

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