Literature DB >> 21445431

Characterization of 2'-deoxyguanosine oxidation products observed in the Fenton-like system Cu(II)/H2O2/reductant in nucleoside and oligodeoxynucleotide contexts.

Aaron M Fleming1, James G Muller, Insun Ji, Cynthia J Burrows.   

Abstract

Reactive oxygen species attack both base and sugar moieties in DNA with a preference among the bases for reaction at guanine. In the present study, 2'-deoxyguanosine (dG) was oxidized by a copper-mediated Fenton reaction with the reductants ascorbate or N-acetyl-cysteine, yielding oxidation on both the base and the sugar. The primary oxidized lesions observed in these studies include the 2'-deoxyribonucleosides of 8-oxo-7,8-dihydroguanosine (dOG), spiroiminodihydantoin (dSp), guanidinohydantoin (dGh), oxazolone (dZ), and 5-carboxamido-5-formamido-2-iminohydantoin (d2Ih), as well as the free base guanine. d2Ih was the major product observed in the nucleoside, single- and double-stranded oligodeoxynucleotide contexts and is proposed to arise from oxidation at C5 of guanine. Product distribution studies provide insight into the role of the reductant in partitioning of dG base oxidation along the C5 and C8 pathways.

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Year:  2011        PMID: 21445431      PMCID: PMC4008943          DOI: 10.1039/c1ob05112a

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  59 in total

1.  Guanine oxidation: one- and two-electron reactions.

Authors:  Geneviève Pratviel; Bernard Meunier
Journal:  Chemistry       Date:  2006-08-07       Impact factor: 5.236

Review 2.  Base-excision repair of oxidative DNA damage.

Authors:  Sheila S David; Valerie L O'Shea; Sucharita Kundu
Journal:  Nature       Date:  2007-06-21       Impact factor: 49.962

Review 3.  Does measurement of oxidative damage to DNA have clinical significance?

Authors:  Marcus S Cooke; Ryszard Olinski; Mark D Evans
Journal:  Clin Chim Acta       Date:  2005-10-07       Impact factor: 3.786

Review 4.  Oxidants, antioxidants, and the degenerative diseases of aging.

Authors:  B N Ames; M K Shigenaga; T M Hagen
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

5.  Comparison of oxidation products from DNA components by gamma-irradiation and Fenton-type reactions.

Authors:  N Murata-Kamiya; H Kamiya; M Muraoka; H Kaji; H Kasai
Journal:  J Radiat Res       Date:  1997-06       Impact factor: 2.724

6.  8-oxo-7,8-dihydroguanine is removed by a nucleotide excision repair-like mechanism in Porphyromonas gingivalis W83.

Authors:  N A Johnson; R McKenzie; L McLean; L C Sowers; H M Fletcher
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

7.  Quantitation of 8-oxoguanine and strand breaks produced by four oxidizing agents.

Authors:  L J Kennedy; K Moore; J L Caulfield; S R Tannenbaum; P C Dedon
Journal:  Chem Res Toxicol       Date:  1997-04       Impact factor: 3.739

8.  Copper-ion-dependent damage to the bases in DNA in the presence of hydrogen peroxide.

Authors:  O I Aruoma; B Halliwell; E Gajewski; M Dizdaroglu
Journal:  Biochem J       Date:  1991-02-01       Impact factor: 3.857

9.  Formation of 13C-, 15N-, and 18O-labeled guanidinohydantoin from guanosine oxidation with singlet oxygen. Implications for structure and mechanism.

Authors:  Yu Ye; James G Muller; Wenchen Luo; Charles L Mayne; Anthony J Shallop; Roger A Jones; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

10.  Quantitative analysis of the oxidative DNA lesion, 2,2-diamino-4-(2-deoxy-beta-D-erythro-pentofuranosyl)amino]-5(2H)-oxazolone (oxazolone), in vitro and in vivo by isotope dilution-capillary HPLC-ESI-MS/MS.

Authors:  Brock Matter; Danuta Malejka-Giganti; A Saari Csallany; Natalia Tretyakova
Journal:  Nucleic Acids Res       Date:  2006-10-04       Impact factor: 16.971

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  31 in total

1.  pH-Dependent Equilibrium between 5-Guanidinohydantoin and Iminoallantoin Affects Nucleotide Insertion Opposite the DNA Lesion.

Authors:  Judy Zhu; Aaron M Fleming; Anita M Orendt; Cynthia J Burrows
Journal:  J Org Chem       Date:  2015-11-24       Impact factor: 4.354

2.  Guanine oxidation product 5-carboxamido-5-formamido-2-iminohydantoin induces mutations when bypassed by DNA polymerases and is a substrate for base excision repair.

Authors:  Omar R Alshykhly; Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Res Toxicol       Date:  2015-09-02       Impact factor: 3.739

3.  Iron Fenton oxidation of 2'-deoxyguanosine in physiological bicarbonate buffer yields products consistent with the reactive oxygen species carbonate radical anion not the hydroxyl radical.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Commun (Camb)       Date:  2020-08-25       Impact factor: 6.222

4.  Oxidative DNA damage is epigenetic by regulating gene transcription via base excision repair.

Authors:  Aaron M Fleming; Yun Ding; Cynthia J Burrows
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-31       Impact factor: 11.205

5.  G-quadruplex folds of the human telomere sequence alter the site reactivity and reaction pathway of guanine oxidation compared to duplex DNA.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Res Toxicol       Date:  2013-03-13       Impact factor: 3.739

Review 6.  Occurrence, Biological Consequences, and Human Health Relevance of Oxidative Stress-Induced DNA Damage.

Authors:  Yang Yu; Yuxiang Cui; Laura J Niedernhofer; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2016-11-07       Impact factor: 3.739

7.  Endonuclease and Exonuclease Activities on Oligodeoxynucleotides Containing Spiroiminodihydantoin Depend on the Sequence Context and the Lesion Stereochemistry.

Authors:  Xin Chen; Aaron M Fleming; James G Muller; Cynthia J Burrows
Journal:  New J Chem       Date:  2013-11-01       Impact factor: 3.591

8.  Single-molecule detection of a guanine(C8) - thymine(N3) cross-link using ion channel recording.

Authors:  Anna H Wolna; Aaron M Fleming; Cynthia J Burrows
Journal:  J Phys Org Chem       Date:  2014-04-01       Impact factor: 2.391

9.  Reconciliation of chemical, enzymatic, spectroscopic and computational data to assign the absolute configuration of the DNA base lesion spiroiminodihydantoin.

Authors:  Aaron M Fleming; Anita M Orendt; Yanan He; Judy Zhu; Rina K Dukor; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2013-11-21       Impact factor: 15.419

10.  Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing.

Authors:  Aaron M Fleming; James G Muller; Adrienne C Dlouhy; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2012-08-29       Impact factor: 15.419

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