Literature DB >> 21442271

The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115).

Sun-Li Chong1, Evy Battaglia, Pedro M Coutinho, Bernard Henrissat, Maija Tenkanen, Ronald P de Vries.   

Abstract

Schizophyllum commune produces an α-glucuronidase that is active on polymeric xylan, while the ascomycete α-glucuronidases are only active on xylan oligomers. In this study, we have identified the gene (agu1) encoding this enzyme and confirmed the functionality by overexpression of the gene in S. commune and degradation of aldopentauronic acids, (MeGlcA)(3)-Xyl(4), in the cultivation medium of the transformants. Expression analysis demonstrated that agu1 is not co-regulated with the predominant xylanase-encoding gene (xynA) of S. commune. The detailed sequence analysis of Agu1 demonstrated that this gene belongs to a novel glycoside hydrolase family (GH115) that also contains candidate genes from ascomycete fungi and bacteria. Phylogenetic analysis showed that the fungal GH115 α-glucuronidases are distinctly separate from the prokaryotic clade and distributed over three branches. The identification of putative genes encoding this enzyme in industrial fungi, such as Aspergillus oryzae and Hypocrea jecorina, will provide a starting point for further analysis of the importance of this enzyme for the hydrolysis of plant biomass.

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Year:  2011        PMID: 21442271     DOI: 10.1007/s00253-011-3157-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  16 in total

Review 1.  Plant-polysaccharide-degrading enzymes from Basidiomycetes.

Authors:  Johanna Rytioja; Kristiina Hildén; Jennifer Yuzon; Annele Hatakka; Ronald P de Vries; Miia R Mäkelä
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

2.  Substituent-specific antibody against glucuronoxylan reveals close association of glucuronic acid and acetyl substituents and distinct labeling patterns in tree species.

Authors:  Sanna Koutaniemi; Fabienne Guillon; Olivier Tranquet; Brigitte Bouchet; Päivi Tuomainen; Liisa Virkki; Henriette L Petersen; William G T Willats; Luc Saulnier; Maija Tenkanen
Journal:  Planta       Date:  2012-04-24       Impact factor: 4.116

3.  A GH115 α-glucuronidase structure reveals dimerization-mediated substrate binding and a proton wire potentially important for catalysis.

Authors:  Casper Wilkens; Marlene Vuillemin; Bo Pilgaard; Igor Polikarpov; Jens Preben Morth
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-04-20       Impact factor: 5.699

4.  Biochemical and Structural Characterization of a Five-domain GH115 α-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.

Authors:  Weijun Wang; Ruoyu Yan; Boguslaw P Nocek; Thu V Vuong; Rosa Di Leo; Xiaohui Xu; Hong Cui; Paul Gatenholm; Guillermo Toriz; Maija Tenkanen; Alexei Savchenko; Emma R Master
Journal:  J Biol Chem       Date:  2016-04-18       Impact factor: 5.157

5.  Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin.

Authors:  Isabelle Benoit; Pedro M Coutinho; Henk A Schols; Jan P Gerlach; Bernard Henrissat; Ronald P de Vries
Journal:  BMC Genomics       Date:  2012-07-19       Impact factor: 3.969

Review 6.  Fungal enzyme sets for plant polysaccharide degradation.

Authors:  Joost van den Brink; Ronald P de Vries
Journal:  Appl Microbiol Biotechnol       Date:  2011-07-23       Impact factor: 4.813

7.  Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine.

Authors:  Peng Zheng; Yongliang Xia; Guohua Xiao; Chenghui Xiong; Xiao Hu; Siwei Zhang; Huajun Zheng; Yin Huang; Yan Zhou; Shengyue Wang; Guo-Ping Zhao; Xingzhong Liu; Raymond J St Leger; Chengshu Wang
Journal:  Genome Biol       Date:  2011-11-23       Impact factor: 13.583

8.  Insight into glycoside hydrolases for debranched xylan degradation from extremely thermophilic bacterium Caldicellulosiruptor lactoaceticus.

Authors:  Xiaojing Jia; Shuofu Mi; Jinzhi Wang; Weibo Qiao; Xiaowei Peng; Yejun Han
Journal:  PLoS One       Date:  2014-09-03       Impact factor: 3.240

9.  Active fungal GH115 α-glucuronidase produced in Arabidopsis thaliana affects only the UX1-reactive glucuronate decorations on native glucuronoxylans.

Authors:  Sun-Li Chong; Marta Derba-Maceluch; Sanna Koutaniemi; Leonardo D Gómez; Simon J McQueen-Mason; Maija Tenkanen; Ewa J Mellerowicz
Journal:  BMC Biotechnol       Date:  2015-06-18       Impact factor: 2.563

10.  The two Rasamsonia emersonii α-glucuronidases, ReGH67 and ReGH115, show a different mode-of-action towards glucuronoxylan and glucuronoxylo-oligosaccharides.

Authors:  Patricia Murciano Martínez; Maaike M Appeldoorn; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2016-05-18       Impact factor: 6.040

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