Literature DB >> 21441917

RGB marking facilitates multicolor clonal cell tracking.

Kristoffer Weber1, Michael Thomaschewski, Michael Warlich, Tassilo Volz, Kerstin Cornils, Birte Niebuhr, Maike Täger, Marc Lütgehetmann, Jörg-Matthias Pollok, Carol Stocking, Maura Dandri, Daniel Benten, Boris Fehse.   

Abstract

We simultaneously transduced cells with three lentiviral gene ontology (LeGO) vectors encoding red, green or blue fluorescent proteins. Individual cells were thereby marked by different combinations of inserted vectors, resulting in the generation of numerous mixed colors, a principle we named red-green-blue (RGB) marking. We show that lentiviral vector-mediated RGB marking remained stable after cell division, thus facilitating the analysis of clonal cell fates in vitro and in vivo. Particularly, we provide evidence that RGB marking allows assessment of clonality after regeneration of injured livers by transplanted primary hepatocytes. We also used RGB vectors to mark hematopoietic stem/progenitor cells that generated colored spleen colonies. Finally, based on limiting-dilution and serial transplantation assays with tumor cells, we found that clonal tumor cells retained their specific color-code over extensive periods of time. We conclude that RGB marking represents a useful tool for cell clonality studies in tissue regeneration and pathology.

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Year:  2011        PMID: 21441917     DOI: 10.1038/nm.2338

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  39 in total

1.  Dose finding with retroviral vectors: correlation of retroviral vector copy numbers in single cells with gene transfer efficiency in a cell population.

Authors:  Olga S Kustikova; Anke Wahlers; Klaus Kuhlcke; Birgit Stahle; Axel R Zander; Christopher Baum; Boris Fehse
Journal:  Blood       Date:  2003-07-24       Impact factor: 22.113

2.  Retroviral insertion site analysis in dominant haematopoietic clones.

Authors:  Olga S Kustikova; Ute Modlich; Boris Fehse
Journal:  Methods Mol Biol       Date:  2009

3.  Lentiviral gene ontology (LeGO) vectors equipped with novel drug-selectable fluorescent proteins: new building blocks for cell marking and multi-gene analysis.

Authors:  K Weber; U Mock; B Petrowitz; U Bartsch; B Fehse
Journal:  Gene Ther       Date:  2009-12-17       Impact factor: 5.250

4.  Retroviral integration site analysis in hematopoietic stem cells.

Authors:  Olga S Kustikova; Christopher Baum; Boris Fehse
Journal:  Methods Mol Biol       Date:  2008

5.  A multicolor panel of novel lentiviral "gene ontology" (LeGO) vectors for functional gene analysis.

Authors:  Kristoffer Weber; Udo Bartsch; Carol Stocking; Boris Fehse
Journal:  Mol Ther       Date:  2008-02-12       Impact factor: 11.454

6.  In vivo proliferation of hepadnavirus-infected hepatocytes induces loss of covalently closed circular DNA in mice.

Authors:  Marc Lutgehetmann; Tassilo Volz; Anne Köpke; Tim Broja; Eike Tigges; Ansgar W Lohse; Eberhard Fuchs; John M Murray; Joerg Petersen; Maura Dandri
Journal:  Hepatology       Date:  2010-07       Impact factor: 17.425

7.  X-inactivation patch size in human female tissue confounds the assessment of tumor clonality.

Authors:  Marco Novelli; Antonio Cossu; Dahmane Oukrif; Alberto Quaglia; Sunil Lakhani; Richard Poulsom; Peter Sasieni; Piera Carta; Marcella Contini; Anna Pasca; Giuseppe Palmieri; Walter Bodmer; Francesco Tanda; Nick Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-27       Impact factor: 11.205

8.  Human tumour clonality assessment--flawed but necessary.

Authors:  S J Leedham; N A Wright
Journal:  J Pathol       Date:  2008-08       Impact factor: 7.996

9.  Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation.

Authors:  Kairong Cui; Chongzhi Zang; Tae-Young Roh; Dustin E Schones; Richard W Childs; Weiqun Peng; Keji Zhao
Journal:  Cell Stem Cell       Date:  2009-01-09       Impact factor: 24.633

10.  Sustained high-level polyclonal hematopoietic marking and transgene expression 4 years after autologous transplantation of rhesus macaques with SIV lentiviral vector-transduced CD34+ cells.

Authors:  Yoo-Jin Kim; Yoon-Sang Kim; Andre Larochelle; Gabriel Renaud; Tyra G Wolfsberg; Rima Adler; Robert E Donahue; Peiman Hematti; Bum-Kee Hong; Jean Roayaei; Keiko Akagi; Janice M Riberdy; Arthur W Nienhuis; Cynthia E Dunbar; Derek A Persons
Journal:  Blood       Date:  2009-04-01       Impact factor: 22.113

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  74 in total

1.  RGB marking with lentiviral vectors for multicolor clonal cell tracking.

Authors:  Kristoffer Weber; Michael Thomaschewski; Daniel Benten; Boris Fehse
Journal:  Nat Protoc       Date:  2012-04-05       Impact factor: 13.491

2.  Glioma escape signature and clonal development under immune pressure.

Authors:  Cecile L Maire; Malte Mohme; Michael Bockmayr; Krystian D Fita; Kristoffer Riecken; Daniela Börnigen; Malik Alawi; Antonio Failla; Katharina Kolbe; Svenja Zapf; Mareike Holz; Katrin Neumann; Lasse Dührsen; Tobias Lange; Boris Fehse; Manfred Westphal; Katrin Lamszus
Journal:  J Clin Invest       Date:  2020-10-01       Impact factor: 14.808

3.  A Barcoding Strategy Enabling Higher-Throughput Library Screening by Microscopy.

Authors:  Robert Chen; Harneet S Rishi; Vladimir Potapov; Masaki R Yamada; Vincent J Yeh; Thomas Chow; Celia L Cheung; Austin T Jones; Terry D Johnson; Amy E Keating; William C DeLoache; John E Dueber
Journal:  ACS Synth Biol       Date:  2015-07-15       Impact factor: 5.110

Review 4.  Brainbow: new resources and emerging biological applications for multicolor genetic labeling and analysis.

Authors:  Tamily A Weissman; Y Albert Pan
Journal:  Genetics       Date:  2015-02       Impact factor: 4.562

5.  A Lentiviral Fluorescent Genetic Barcoding System for Flow Cytometry-Based Multiplex Tracking.

Authors:  Tobias Maetzig; Jens Ruschmann; Courteney K Lai; Mor Ngom; Suzan Imren; Patricia Rosten; Gudmundur L Norddahl; Niklas von Krosigk; Lea Sanchez Milde; Christopher May; Anton Selich; Michael Rothe; Ishpreet Dhillon; Axel Schambach; R Keith Humphries
Journal:  Mol Ther       Date:  2017-01-05       Impact factor: 11.454

6.  Simple approach to three-color two-photon microscopy by a fiber-optic wavelength convertor.

Authors:  Kuen-Che Li; Lynn L H Huang; Jhih-Hao Liang; Ming-Che Chan
Journal:  Biomed Opt Express       Date:  2016-10-31       Impact factor: 3.732

7.  Robust imaging and gene delivery to study human lymphoblastoid cell lines.

Authors:  Lachlan A Jolly; Ying Sun; Renée Carroll; Claire C Homan; Jozef Gecz
Journal:  J Hum Genet       Date:  2018-06-20       Impact factor: 3.172

Review 8.  Functional immunoimaging: the revolution continues.

Authors:  Philippe Bousso; Hélène D Moreau
Journal:  Nat Rev Immunol       Date:  2012-12       Impact factor: 53.106

9.  Dynamic clonal analysis of murine hematopoietic stem and progenitor cells marked by 5 fluorescent proteins using confocal and multiphoton microscopy.

Authors:  Daniela Malide; Jean-Yves Métais; Cynthia E Dunbar
Journal:  Blood       Date:  2012-09-20       Impact factor: 22.113

10.  Contribution of tumor heterogeneity in a new animal model of CNS tumors.

Authors:  Fuyi Chen; Albert J Becker; Joseph J LoTurco
Journal:  Mol Cancer Res       Date:  2014-02-05       Impact factor: 5.852

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