Literature DB >> 21439400

Escherichia coli responds with a rapid and large change in growth rate upon a shift from glucose-limited to glucose-excess conditions.

Hilal Taymaz-Nikerel1, Walter M van Gulik, Joseph J Heijnen.   

Abstract

Glucose pulse experiments at seconds time scale resolution were performed in aerobic glucose-limited Escherichia coli chemostat cultures. The dynamic responses of oxygen-uptake and growth rate at seconds time scale were determined using a new method based on the dynamic liquid-phase mass balance for oxygen and the pseudo-steady-state ATP balance. Significant fold changes in metabolites (10-1/10) and fluxes (4-1/4) were observed during the short (200 s) period of glucose excess. During glucose excess there was no secretion of by-products and the increased glucose uptake rate led within 40s to a 3.7 fold increase in growth rate. Also within 40-60s a new pseudo-steady-state was reached for both metabolite levels and fluxes. Flux changes of reactions were strongly correlated to the concentrations of involved compounds. Surprisingly the 3.7 fold increase in growth rate and hence protein synthesis rate was not matched by a significant increase in amino acid concentrations. This poses interesting questions for the kinetic factors, which drive protein synthesis by ribosomes.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21439400     DOI: 10.1016/j.ymben.2011.03.003

Source DB:  PubMed          Journal:  Metab Eng        ISSN: 1096-7176            Impact factor:   9.783


  9 in total

1.  Metabolic responses of Saccharomyces cerevisiae to valine and ammonium pulses during four-stage continuous wine fermentations.

Authors:  T Clement; M Perez; J R Mouret; I Sanchez; J M Sablayrolles; C Camarasa
Journal:  Appl Environ Microbiol       Date:  2013-02-15       Impact factor: 4.792

2.  Is energy excess the initial trigger of carbon overflow metabolism? Transcriptional network response of carbon-limited Escherichia coli to transient carbon excess.

Authors:  Zhaopeng Li; Markus Nees; Katja Bettenbrock; Ursula Rinas
Journal:  Microb Cell Fact       Date:  2022-04-21       Impact factor: 6.352

3.  Flux imbalance analysis and the sensitivity of cellular growth to changes in metabolite pools.

Authors:  Ed Reznik; Pankaj Mehta; Daniel Segrè
Journal:  PLoS Comput Biol       Date:  2013-08-29       Impact factor: 4.475

4.  Systematic applications of metabolomics in metabolic engineering.

Authors:  Robert A Dromms; Mark P Styczynski
Journal:  Metabolites       Date:  2012-12-14

5.  Metabolic regulation is sufficient for global and robust coordination of glucose uptake, catabolism, energy production and growth in Escherichia coli.

Authors:  Pierre Millard; Kieran Smallbone; Pedro Mendes
Journal:  PLoS Comput Biol       Date:  2017-02-10       Impact factor: 4.475

6.  Escherichia coli metabolism under short-term repetitive substrate dynamics: adaptation and trade-offs.

Authors:  Eleni Vasilakou; Mark C M van Loosdrecht; S Aljoscha Wahl
Journal:  Microb Cell Fact       Date:  2020-05-29       Impact factor: 5.328

7.  Quantitative Flow Cytometry to Understand Population Heterogeneity in Response to Changes in Substrate Availability in Escherichia coli and Saccharomyces cerevisiae Chemostats.

Authors:  Anna-Lena Heins; Ted Johanson; Shanshan Han; Luisa Lundin; Magnus Carlquist; Krist V Gernaey; Søren J Sørensen; Anna Eliasson Lantz
Journal:  Front Bioeng Biotechnol       Date:  2019-08-05

8.  Unveiling dynamic metabolic signatures in human induced pluripotent and neural stem cells.

Authors:  João Vasconcelos E Sá; Daniel Simão; Ana P Terrasso; Marta M Silva; Catarina Brito; Inês A Isidro; Paula M Alves; Manuel J T Carrondo
Journal:  PLoS Comput Biol       Date:  2020-04-16       Impact factor: 4.475

9.  Changes in Oxygen Availability during Glucose-Limited Chemostat Cultivations of Penicillium chrysogenum Lead to Rapid Metabolite, Flux and Productivity Responses.

Authors:  Qi Yang; Wenli Lin; Jiawei Xu; Nan Guo; Jiachen Zhao; Gaoya Wang; Yongbo Wang; Ju Chu; Guan Wang
Journal:  Metabolites       Date:  2022-01-07
  9 in total

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