Literature DB >> 21438613

Highly sensitive pyrosequencing based on the capture of free adenosine 5' phosphosulfate with adenosine triphosphate sulfurylase.

Haiping Wu1, Wenjuan Wu, Zhiyao Chen, Weipeng Wang, Guohua Zhou, Tomoharu Kajiyama, Hideki Kambara.   

Abstract

In pyrosequencing chemistry, four cascade enzymatic reactions with the catalysis of polymerase, adenosine triphosphate (ATP) sulfurylase, luciferase, and apyrase are employed. The sensitivity of pyrosequencing mainly depends on the concentration of luciferase which catalyzes a photoemission reaction. However, the side-reaction of adenosine 5' phosphosulfate (APS, an analogue of ATP) with luciferase resulted in an unavoidable background signal; hence, the sensitivity cannot be much higher due to the simultaneous increase of the background signal when a larger amount of luciferase is used. In this study, we demonstrated a sensitive pyrosequencing using a large amount of ATP sulfurylase to lower the concentration of free APS in the pyrosequencing mixture. As the complex of ATP sulfurylase and APS does not react with luciferase, a large amount of luciferase can be used to achieve a sensitive pyrosequencing reaction. This sensitivity-improving pyrosequencing chemistry allows the use of an inexpensive light sensor photodiode array for constructing a portable pyrosequencer, a potential tool in a point-of-care test (POCT).

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Year:  2011        PMID: 21438613     DOI: 10.1021/ac2000785

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  3 in total

1.  Immunohistochemical detection of mutated BRAF V600E supports the clonal origin of BRAF-induced thyroid cancers along the spectrum of disease progression.

Authors:  Ronald A Ghossein; Nora Katabi; James A Fagin
Journal:  J Clin Endocrinol Metab       Date:  2013-06-17       Impact factor: 5.958

2.  An alternative novel tool for DNA editing without target sequence limitation: the structure-guided nuclease.

Authors:  Shu Xu; Shasha Cao; Bingjie Zou; Yunyun Yue; Chun Gu; Xin Chen; Pei Wang; Xiaohua Dong; Zheng Xiang; Kai Li; Minsheng Zhu; Qingshun Zhao; Guohua Zhou
Journal:  Genome Biol       Date:  2016-09-15       Impact factor: 13.583

Review 3.  Current and new approaches in GMO detection: challenges and solutions.

Authors:  Marie-Alice Fraiture; Philippe Herman; Isabel Taverniers; Marc De Loose; Dieter Deforce; Nancy H Roosens
Journal:  Biomed Res Int       Date:  2015-10-15       Impact factor: 3.411

  3 in total

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