Literature DB >> 21437882

Binding characteristics of Trichoderma reesei cellulases on untreated, ammonia fiber expansion (AFEX), and dilute-acid pretreated lignocellulosic biomass.

Dahai Gao1, Shishir P S Chundawat, Nirmal Uppugundla, Venkatesh Balan, Bruce E Dale.   

Abstract

Studying the binding properties of cellulases to lignocellulosic substrates is critical to achieving a fundamental understanding of plant cell wall saccharification. Lignin auto-fluorescence and degradation products formed during pretreatment impede accurate quantification of individual glycosyl hydrolases (GH) binding to pretreated cell walls. A high-throughput fast protein liquid chromatography (HT-FPLC)-based method has been developed to quantify cellobiohydrolase I (CBH I or Cel7A), cellobiohydrolase II (CBH II or Cel6A), and endoglucanase I (EG I or Cel7B) present in hydrolyzates of untreated, ammonia fiber expansion (AFEX), and dilute-acid pretreated corn stover (CS). This method can accurately quantify individual enzymes present in complex binary and ternary protein mixtures without interference from plant cell wall-derived components. The binding isotherms for CBH I, CBH II, and EG I were obtained after incubation for 2 h at 4 °C. Both AFEX and dilute acid pretreatment resulted in increased cellulase binding compared with untreated CS. Cooperative binding of CBH I and/or CBH II in the presence of EG I was observed only for AFEX treated CS. Competitive binding between enzymes was found for certain other enzyme-substrate combinations over the protein loading range tested (i.e., 25-450 mg/g glucan). Langmuir single-site adsorption model was fitted to the binding isotherm data to estimate total available binding sites E(bm) (mg/g glucan) and association constant K(a) (L/mg). Our results clearly demonstrate that the characteristics of cellulase binding depend not only on the enzyme GH family but also on the type of pretreatment method employed.
Copyright © 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 21437882     DOI: 10.1002/bit.23140

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  12 in total

1.  Increased enzyme binding to substrate is not necessary for more efficient cellulose hydrolysis.

Authors:  Dahai Gao; Shishir P S Chundawat; Anurag Sethi; Venkatesh Balan; S Gnanakaran; Bruce E Dale
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-19       Impact factor: 11.205

2.  Activity-based protein profiling of secreted cellulolytic enzyme activity dynamics in Trichoderma reesei QM6a, NG14, and RUT-C30.

Authors:  Lindsey N Anderson; David E Culley; Beth A Hofstad; Lacie M Chauvigné-Hines; Erika M Zink; Samuel O Purvine; Richard D Smith; Stephen J Callister; Jon M Magnuson; Aaron T Wright
Journal:  Mol Biosyst       Date:  2013-10-14

Review 3.  Current challenges in commercially producing biofuels from lignocellulosic biomass.

Authors:  Venkatesh Balan
Journal:  ISRN Biotechnol       Date:  2014-05-04

4.  Lignin triggers irreversible cellulase loss during pretreated lignocellulosic biomass saccharification.

Authors:  Dahai Gao; Carolyn Haarmeyer; Venkatesh Balan; Timothy A Whitehead; Bruce E Dale; Shishir Ps Chundawat
Journal:  Biotechnol Biofuels       Date:  2014-12-13       Impact factor: 6.040

5.  Modelling of amorphous cellulose depolymerisation by cellulases, parametric studies and optimisation.

Authors:  Hongxing Niu; Nilay Shah; Cleo Kontoravdi
Journal:  Biochem Eng J       Date:  2016-01-15       Impact factor: 3.978

6.  Mechanism of lignin inhibition of enzymatic biomass deconstruction.

Authors:  Josh V Vermaas; Loukas Petridis; Xianghong Qi; Roland Schulz; Benjamin Lindner; Jeremy C Smith
Journal:  Biotechnol Biofuels       Date:  2015-12-21       Impact factor: 6.040

7.  Rapid selection and identification of Miscanthus genotypes with enhanced glucan and xylan yields from hydrothermal pretreatment followed by enzymatic hydrolysis.

Authors:  Taiying Zhang; Charles E Wyman; Katrin Jakob; Bin Yang
Journal:  Biotechnol Biofuels       Date:  2012-08-03       Impact factor: 6.040

8.  The development and use of an ELISA-based method to follow the distribution of cellulase monocomponents during the hydrolysis of pretreated corn stover.

Authors:  Amadeus Y Pribowo; Jinguang Hu; Valdeir Arantes; Jack N Saddler
Journal:  Biotechnol Biofuels       Date:  2013-05-20       Impact factor: 6.040

9.  Environmental assessment of mild bisulfite pretreatment of forest residues into fermentable sugars for biofuel production.

Authors:  Ikechukwu C Nwaneshiudu; Indroneil Ganguly; Francesca Pierobon; Tait Bowers; Ivan Eastin
Journal:  Biotechnol Biofuels       Date:  2016-01-22       Impact factor: 6.040

10.  Sugar loss and enzyme inhibition due to oligosaccharide accumulation during high solids-loading enzymatic hydrolysis.

Authors:  Saisi Xue; Nirmal Uppugundla; Michael J Bowman; David Cavalier; Leonardo Da Costa Sousa; Bruce E Dale; Venkatesh Balan
Journal:  Biotechnol Biofuels       Date:  2015-11-26       Impact factor: 6.040

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