Literature DB >> 21436028

Statistical image analysis reveals features affecting fates of Myxococcus xanthus developmental aggregates.

Chunyan Xie1, Haiyang Zhang, Lawrence J Shimkets, Oleg A Igoshin.   

Abstract

Starving Myxococcus xanthus bacteria use their motility systems to self-organize into multicellular fruiting bodies, large mounds in which cells differentiate into metabolically inert spores. Despite the identification of the genetic pathways required for aggregation and the use of microcinematography to observe aggregation dynamics in WT and mutant strains, a mechanistic understanding of aggregation is still incomplete. For example, it is not clear why some of the initial aggregates mature into fruiting bodies, whereas others disperse, merge, or split into two. Here, we develop high-throughput image quantification and statistical analysis methods to gain insight into M. xanthus developmental aggregation dynamics. A quantitative metric of features characterizing each aggregate is used to deduce the properties of the aggregates that are correlated with each fate. The analysis shows that small aggregate size but not neighbor-related parameters correlate with aggregate dispersal. Furthermore, close proximity is necessary but not sufficient for aggregate merging. Finally, splitting occurs for those aggregates that are unusually large and elongated. These observations place severe constraints on the underlying aggregation mechanisms and present strong evidence against the role of long-range morphogenic gradients or biased cell exchange in the dispersal, merging, or splitting of transient aggregates. This approach can be expanded and adapted to study self-organization in other cellular systems.

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Mesh:

Year:  2011        PMID: 21436028      PMCID: PMC3078403          DOI: 10.1073/pnas.1018383108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Spatial control of cell differentiation in Myxococcus xanthus.

Authors:  B Julien; A D Kaiser; A Garza
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

2.  An extracellular matrix-associated zinc metalloprotease is required for dilauroyl phosphatidylethanolamine chemotactic excitation in Myxococcus xanthus.

Authors:  Daniel B Kearns; Pamela J Bonner; Daniel R Smith; Lawrence J Shimkets
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

3.  Dynamics of fruiting body morphogenesis.

Authors:  Dale Kaiser; Roy Welch
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

4.  Aggregation during fruiting body formation in Myxococcus xanthus is driven by reducing cell movement.

Authors:  Oleksii Sliusarenko; David R Zusman; George Oster
Journal:  J Bacteriol       Date:  2006-11-10       Impact factor: 3.490

5.  A three-dimensional model of myxobacterial aggregation by contact-mediated interactions.

Authors:  Olga Sozinova; Yi Jiang; Dale Kaiser; Mark Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-01       Impact factor: 11.205

6.  Identification of a developmental chemoattractant in Myxococcus xanthus through metabolic engineering.

Authors:  D B Kearns; A Venot; P J Bonner; B Stevens; G J Boons; L J Shimkets
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

7.  Morphogenesis and developmental interactions in myxobacteria.

Authors:  J W Wireman; M Dworkin
Journal:  Science       Date:  1975-08-15       Impact factor: 47.728

8.  Myxococcus xanthus fibril appendages are essential for excitation by a phospholipid attractant.

Authors:  D B Kearns; B D Campbell; L J Shimkets
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

9.  Spatial simulations of myxobacterial development.

Authors:  Antony B Holmes; Sara Kalvala; David E Whitworth
Journal:  PLoS Comput Biol       Date:  2010-02-26       Impact factor: 4.475

10.  Behavior of peripheral rods and their role in the life cycle of Myxococcus xanthus.

Authors:  K A O'Connor; D R Zusman
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

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  16 in total

1.  Cell division resets polarity and motility for the bacterium Myxococcus xanthus.

Authors:  Cameron W Harvey; Chinedu S Madukoma; Shant Mahserejian; Mark S Alber; Joshua D Shrout
Journal:  J Bacteriol       Date:  2014-08-25       Impact factor: 3.490

2.  Data-driven modeling reveals cell behaviors controlling self-organization during Myxococcus xanthus development.

Authors:  Christopher R Cotter; Heinz-Bernd Schüttler; Oleg A Igoshin; Lawrence J Shimkets
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-22       Impact factor: 11.205

3.  Convergent evolution of hyperswarming leads to impaired biofilm formation in pathogenic bacteria.

Authors:  Dave van Ditmarsch; Kerry E Boyle; Hassan Sakhtah; Jennifer E Oyler; Carey D Nadell; Éric Déziel; Lars E P Dietrich; Joao B Xavier
Journal:  Cell Rep       Date:  2013-08-15       Impact factor: 9.423

4.  Fatty Acid Oxidation Is Required for Myxococcus xanthus Development.

Authors:  Hannah A Bullock; Huifeng Shen; Tye O Boynton; Lawrence J Shimkets
Journal:  J Bacteriol       Date:  2018-04-24       Impact factor: 3.490

5.  Quantifying aggregation dynamics during Myxococcus xanthus development.

Authors:  Haiyang Zhang; Stuart Angus; Michael Tran; Chunyan Xie; Oleg A Igoshin; Roy D Welch
Journal:  J Bacteriol       Date:  2011-07-22       Impact factor: 3.490

6.  Cell density, alignment, and orientation correlate with C-signal-dependent gene expression during Myxococcus xanthus development.

Authors:  Y Hoang; Joshua L Franklin; Yann S Dufour; Lee Kroos
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-09       Impact factor: 11.205

7.  Ultrasensitive Response of Developing Myxococcus xanthus to the Addition of Nutrient Medium Correlates with the Level of MrpC.

Authors:  Y Hoang; Lee Kroos
Journal:  J Bacteriol       Date:  2018-10-23       Impact factor: 3.490

8.  Efficient multiple object tracking using mutually repulsive active membranes.

Authors:  Yi Deng; Philip Coen; Mingzhai Sun; Joshua W Shaevitz
Journal:  PLoS One       Date:  2013-06-14       Impact factor: 3.240

9.  Short-range guiding can result in the formation of circular aggregates in myxobacteria populations.

Authors:  Albertas Janulevicius; Mark van Loosdrecht; Cristian Picioreanu
Journal:  PLoS Comput Biol       Date:  2015-04-30       Impact factor: 4.475

10.  Myxococcus CsgA, Drosophila Sniffer, and human HSD10 are cardiolipin phospholipases.

Authors:  Tye O'Hara Boynton; Lawrence Joseph Shimkets
Journal:  Genes Dev       Date:  2015-09-03       Impact factor: 11.361

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