Literature DB >> 21435344

Molecular structure and flexibility of the yeast coatomer as revealed by electron microscopy.

Calvin K Yip1, Thomas Walz.   

Abstract

Coat protein complex I (COPI)-coated vesicles, one of three major types of vesicular carriers in the cell, mediate the early secretory pathway and retrograde transport from the Golgi to the endoplasmic reticulum. COPI vesicles are generated through activation of the regulatory GTPase Arf1 at the donor membrane and the subsequent recruitment of coatomer, a coat protein complex consisting of seven stably associated components. Coatomer functions in binding and sequestering cargo molecules and assembles into a polymeric protein shell that encompasses the surface of COPI vesicles. Little is known about the structural properties of this heptameric complex. We have isolated native yeast coatomer and examined its structure and subunit organization by single-particle electron microscopy. Our analyses provide the first three-dimensional picture of the complete coatomer and reveal substantial conformational flexibility likely to be critical for its scaffolding function.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21435344      PMCID: PMC3096150          DOI: 10.1016/j.jmb.2011.03.029

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  30 in total

1.  Conserved structural motifs in intracellular trafficking pathways: structure of the gammaCOP appendage domain.

Authors:  Gregory R Hoffman; Peter B Rahl; Ruth N Collins; Richard A Cerione
Journal:  Mol Cell       Date:  2003-09       Impact factor: 17.970

2.  Crystal structure of the clathrin adaptor protein 1 core.

Authors:  Ekaterina E Heldwein; Eric Macia; Jing Wang; Helen L Yin; Tomas Kirchhausen; Stephen C Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

3.  Structural biology: Conservation in vesicle coats.

Authors:  Stephen C Harrison; Tomas Kirchhausen
Journal:  Nature       Date:  2010-08-26       Impact factor: 49.962

Review 4.  The evolving understanding of COPI vesicle formation.

Authors:  Victor W Hsu; Stella Y Lee; Jia-Shu Yang
Journal:  Nat Rev Mol Cell Biol       Date:  2009-03-18       Impact factor: 94.444

Review 5.  Three-dimensional reconstruction of single particles from random and nonrandom tilt series.

Authors:  M Radermacher
Journal:  J Electron Microsc Tech       Date:  1988-08

6.  Structure of the Sec13/31 COPII coat cage.

Authors:  Scott M Stagg; Cemal Gürkan; Douglas M Fowler; Paul LaPointe; Ted R Foss; Clinton S Potter; Bridget Carragher; William E Balch
Journal:  Nature       Date:  2006-01-12       Impact factor: 49.962

7.  Molecular architecture of the TRAPPII complex and implications for vesicle tethering.

Authors:  Calvin K Yip; Julia Berscheminski; Thomas Walz
Journal:  Nat Struct Mol Biol       Date:  2010-10-24       Impact factor: 15.369

Review 8.  COP and clathrin-coated vesicle budding: different pathways, common approaches.

Authors:  Harvey T McMahon; Ian G Mills
Journal:  Curr Opin Cell Biol       Date:  2004-08       Impact factor: 8.382

9.  Dynamic structure of membrane-anchored Arf*GTP.

Authors:  Yizhou Liu; Richard A Kahn; James H Prestegard
Journal:  Nat Struct Mol Biol       Date:  2010-07-04       Impact factor: 15.369

10.  Molecular organization of the COG vesicle tethering complex.

Authors:  Joshua A Lees; Calvin K Yip; Thomas Walz; Frederick M Hughson
Journal:  Nat Struct Mol Biol       Date:  2010-10-24       Impact factor: 15.369

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  11 in total

Review 1.  Structures and mechanisms of vesicle coat components and multisubunit tethering complexes.

Authors:  Lauren P Jackson; Daniel Kümmel; Karin M Reinisch; David J Owen
Journal:  Curr Opin Cell Biol       Date:  2012-06-22       Impact factor: 8.382

2.  Role of Coatomer Protein I in Virus Replication.

Authors:  Jennifer A Thompson; Jay C Brown
Journal:  J Virol Antivir Res       Date:  2012-10-30

Review 3.  Secretory protein biogenesis and traffic in the early secretory pathway.

Authors:  Charles K Barlowe; Elizabeth A Miller
Journal:  Genetics       Date:  2013-02       Impact factor: 4.562

4.  δ-COP contains a helix C-terminal to its longin domain key to COPI dynamics and function.

Authors:  Eric C Arakel; Kora P Richter; Anne Clancy; Blanche Schwappach
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-13       Impact factor: 11.205

5.  Structural characterization of the Saccharomyces cerevisiae autophagy regulatory complex Atg17-Atg31-Atg29.

Authors:  Leon H Chew; Dheva Setiaputra; Daniel J Klionsky; Calvin K Yip
Journal:  Autophagy       Date:  2013-08-05       Impact factor: 16.016

6.  COPI selectively drives maturation of the early Golgi.

Authors:  Effrosyni Papanikou; Kasey J Day; Jotham Austin; Benjamin S Glick
Journal:  Elife       Date:  2015-12-28       Impact factor: 8.140

7.  Motif-based endomembrane trafficking.

Authors:  Deepanksha Arora; Daniёl Van Damme
Journal:  Plant Physiol       Date:  2021-05-27       Impact factor: 8.340

8.  Structural characterization of coatomer in its cytosolic state.

Authors:  Shengliu Wang; Yujia Zhai; Xiaoyun Pang; Tongxin Niu; Yue-He Ding; Meng-Qiu Dong; Victor W Hsu; Zhe Sun; Fei Sun
Journal:  Protein Cell       Date:  2016-07-29       Impact factor: 14.870

9.  Molecular basis for recognition of dilysine trafficking motifs by COPI.

Authors:  Lauren P Jackson; Michael Lewis; Helen M Kent; Melissa A Edeling; Philip R Evans; Rainer Duden; David J Owen
Journal:  Dev Cell       Date:  2012-11-21       Impact factor: 12.270

10.  A dual phosphorylation switch controls 14-3-3-dependent cell surface expression of TASK-1.

Authors:  Markus Kilisch; Olga Lytovchenko; Eric C Arakel; Daniela Bertinetti; Blanche Schwappach
Journal:  J Cell Sci       Date:  2016-01-07       Impact factor: 5.285

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