Literature DB >> 21431107

Chemical evolution of biomolecule building blocks. Can thermodynamics explain the accumulation of glycine in the prebiotic ocean?

Milán Szori1, Balázs Jójárt, Róbert Izsák, Kornél Szori, Imre G Csizmadia, Béla Viskolcz.   

Abstract

It has always been a question of considerable scientific interest why amino acids (and other biomolecule building blocks) formed and accumulated in the prebiotic ocean. In this study, we suggest an answer to this question for the simplest amino acid, glycine. We have shown for the first time that classical equilibrium thermodynamics can explain the most likely selection of glycine (and the derivative of its dipeptide) in aqueous media, although glycine is not the lowest free energy structure among all (404) possible constitutional isomers. Species preceding glycine in the free energy order are either supramolecular complexes of small molecules or such molecules likely to dissociate and thus get back to the gas phase. Then, 2-hydroxyacetamide condensates yielding a thermodynamically favored derivative of glycine dipeptide providing an alternative way for peptide formation. It is remarkable that a simple equilibrium thermodynamic model can explain the accumulation of glycine and provide a reason for the importance of water in the formation process.

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Year:  2011        PMID: 21431107     DOI: 10.1039/c0cp02687e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  Discovering chemistry with an ab initio nanoreactor.

Authors:  Lee-Ping Wang; Alexey Titov; Robert McGibbon; Fang Liu; Vijay S Pande; Todd J Martínez
Journal:  Nat Chem       Date:  2014-11-02       Impact factor: 24.427

2.  Insights Into the Origin of Life: Did It Begin from HCN and H2O?

Authors:  Tamal Das; Siddharth Ghule; Kumar Vanka
Journal:  ACS Cent Sci       Date:  2019-08-07       Impact factor: 14.553

3.  Interstellar glycolamide: A comprehensive rotational study and an astronomical search in Sgr B2(N).

Authors:  M Sanz-Novo; A Belloche; J L Alonso; L Kolesniková; R T Garrod; S Mata; H S P Müller; K M Menten; Y Gong
Journal:  Astron Astrophys       Date:  2020-07-23       Impact factor: 5.802

  3 in total

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