Literature DB >> 21429151

Diagnostic single nucleotide polymorphisms for identifying westslope cutthroat trout (Oncorhynchus clarki lewisi), Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri) and rainbow trout (Oncorhynchus mykiss).

S T Kalinowski1, B J Novak, D P Drinan, R deM Jennings, N V Vu.   

Abstract

We describe 12 diagnostic single nucleotide polymorphism (SNP) assays for use in species identification among rainbow and cutthroat trout: five of these loci have alleles unique to rainbow trout (Oncorhynchus mykiss), three unique to westslope cutthroat trout (O. clarkii lewisi) and four unique to Yellowstone cutthroat trout (O. clarkii bouvieri). These diagnostic assays were identified using a total of 489 individuals from 26 populations and five fish hatchery strains.
© 2010 Blackwell Publishing Ltd.

Entities:  

Mesh：

Substances：

Year:  2010        PMID： 21429151     DOI： 10.1111/j.1755-0998.2010.02932.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN： 1755-098X            Impact factor:   7.090


  3 in total

1.  Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing.

Authors:  Paul A Hohenlohe; Mitch D Day; Stephen J Amish; Michael R Miller; Nick Kamps-Hughes; Matthew C Boyer; Clint C Muhlfeld; Fred W Allendorf; Eric A Johnson; Gordon Luikart
Journal:  Mol Ecol       Date:  2013-02-21       Impact factor: 6.185

2.  Patterns of hybridization among cutthroat trout and rainbow trout in northern Rocky Mountain streams.

Authors:  Kevin S McKelvey; Michael K Young; Taylor M Wilcox; Daniel M Bingham; Kristine L Pilgrim; Michael K Schwartz
Journal:  Ecol Evol       Date:  2016-01-11       Impact factor: 2.912

3.  Single nucleotide polymorphism discovery in cutthroat trout subspecies using genome reduction, barcoding, and 454 pyro-sequencing.

Authors:  Derek D Houston; David B Elzinga; Peter J Maughan; Scott M Smith; John S K Kauwe; R Paul Evans; Ryan B Stinger; Dennis K Shiozawa
Journal:  BMC Genomics       Date:  2012-12-23       Impact factor: 3.969
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.